Description of binary system by artificial neural networks

D 2004

Description of binary system by artificial neural networks

TOPINKOVÁ, Jana; Libuše TRNKOVÁ; Marta FARKOVÁ a Josef HAVEL

Základní údaje

Originální název

Description of binary system by artificial neural networks

Název česky

Popis binárního systému pomocí umělé neuronové sítě

Autoři

TOPINKOVÁ, Jana; Libuše TRNKOVÁ; Marta FARKOVÁ a Josef HAVEL

Vydání

Brno, Česká republika, Sborník příspěvků IV.pracovní setkání fyzikálních chemiků a elektrochemiků, od s. 39-39, 1 s. 2004

Nakladatel

Masarykova Univerzita v Brně

Další údaje

Jazyk

angličtina

Typ výsledku

Stať ve sborníku

Obor

10405 Electrochemistry

Stát vydavatele

Česká republika

Utajení

není předmětem státního či obchodního tajemství

Označené pro přenos do RIV

Ano

Kód RIV

RIV/00216224:14310/04:00011173

Organizační jednotka

Přírodovědecká fakulta

ISBN

80-210-3319-3

Klíčová slova anglicky

Binary system; adenine; cytosine; UV/Vis spectrophotometry; artificial neural networks (ANNs);

Štítky

adenine, artificial neural networks (ANNs), Binary system, cytosine, UV/VIS spectrophotometry

Změněno: 15. 2. 2005 08:45, prof. RNDr. Libuše Trnková, CSc.

Anotace

ORIG CZ

V originále

There is a growing interest in using artificial neural networks (ANN), not only in chemistry, but also in other research areas. Some recent applications of ANN have been in multicomponent analysis, kinetics, optimization of processes in HPLC and CZE, in chemical equilibria computations, and in spectrophotometry. Adenine (Ade) and cytosine (Cyt) are of great interest for several reasons; in particular, they are the important components of nucleic acids and coenzymes, playing an important role in many biological processes. Generally, the concentrations of individual nucleic bases are usually determined by UV/VIS spectrophotometry. The absorption maxima of these compounds are at 263nm (Ade) and 271 nm (Cyt) at pH 4.7. In this case of fully overlapped spectra, multicomponent analysis can solve the problem. The aim of this work was to explain and show practical possibilities of ANN for an advanced laboratory course in physical chemistry. In this work, students (1) to record separately spectra of Ade and Cyt; (2) to prepare mixtures of Ade and Cyt according to experimental design (23 factorial design) in a concentration range from 0.1 to 0.5 mM, and in 0.5 M acetate buffer (pH 4.7 and ionic strength 0.5); (3) to measure non-smoothed spectra from 240 to 290 nm; (4) to prepare input data (absorbances) and choose the required output data (Ade and Cyt concentrations); (5) to search for the optimal ANN structure (number of input, hidden, and output neurons) and optimal number of epochs for the adaptation (training) process; (6) to use suitable test data (not included in the training set) for verification and testing; (7) to apply the optimal ANN for analysis of unknown samples. The quality of the prediction for the test set was evaluated on the basis of the average root mean square error for prediction (RMSEP) calculated from given and predicted values of Ade and Cyt concentrations. The data were processed on a Pentium PC computer using TRAJAN Release 3.0D software package from TRAJAN Software LTD (Durham, U. K).

Česky

Popis binárního systému pomocí umělé neuronové sítě

Návaznosti

GA203/02/0422, projekt VaV

Název: Nové směry v elektrochemii nukleových kyselin a jejich aplikace v chemii životního prostředí

Investor: Grantová agentura ČR, Nové směry v elektrochemii nukleových kyselin a jejich aplikace v chemii životního prostředí

IAA1163201, projekt VaV

Název: Využití adsorptivní přenosové a eliminační techniky pro elektrochemickou analýzu oligonukleotidů a nukleových kyselin

Investor: Akademie věd ČR, Využití adsorptivní přenosové a eliminační techniky pro elektrochemickou analýzu oligonukleotidů a nukleových kyselin

Citovat

TOPINKOVÁ, Jana; Libuše TRNKOVÁ; Marta FARKOVÁ a Josef HAVEL. Description of binary system by artificial neural networks. In Sborník příspěvků IV.pracovní setkání fyzikálních chemiků a elektrochemiků. Brno, Česká republika: Masarykova Univerzita v Brně, 2004, s. 39-39. ISBN 80-210-3319-3.

@inproceedings{493090,
   author = {Topinková, Jana and Trnková, Libuše and Farková, Marta and Havel, Josef},
   address = {Brno, Česká republika},
   booktitle = {Sborník příspěvků IV.pracovní setkání fyzikálních chemiků a elektrochemiků},
   keywords = {Binary system; adenine; cytosine; UV/Vis spectrophotometry; artificial neural networks (ANNs);},
   language = {eng},
   location = {Brno, Česká republika},
   isbn = {80-210-3319-3},
   pages = {39-39},
   publisher = {Masarykova Univerzita v Brně},
   title = {Description of binary system by artificial neural networks},
   year = {2004}
}

TY  - CONF
ID  - 493090
AU  - Topinková, Jana - Trnková, Libuše - Farková, Marta - Havel, Josef
PY  - 2004
TI  - Description of binary system by artificial neural networks
PB  - Masarykova Univerzita v Brně
CY  - Brno, Česká republika
SN  - 8021033193
KW  - Binary system
KW  - adenine
KW  - cytosine
KW  - UV/Vis spectrophotometry
KW  - artificial neural networks (ANNs);
N2  - There is a growing interest in using artificial neural networks (ANN), not only in chemistry, but also in other research areas. Some recent applications of ANN have been in multicomponent analysis, kinetics, optimization of processes in HPLC and CZE, in chemical equilibria computations, and in spectrophotometry. Adenine (Ade) and cytosine (Cyt) are of great interest for several reasons; in particular, they are the important components of nucleic acids and coenzymes, playing an important role in many biological processes. Generally, the concentrations of individual nucleic bases are usually determined by UV/VIS spectrophotometry. The absorption maxima of these compounds are at 263nm (Ade) and 271 nm (Cyt) at pH 4.7. In this case of fully overlapped spectra, multicomponent analysis can solve the problem. The aim of this work was to explain and show practical possibilities of ANN for an advanced laboratory course in physical chemistry. In this work, students (1) to record separately spectra of Ade and Cyt; (2) to prepare mixtures of Ade and Cyt according to experimental design (23 factorial design) in a concentration range from 0.1 to 0.5 mM, and in 0.5 M acetate buffer (pH 4.7 and ionic strength 0.5); (3) to measure non-smoothed spectra from 240 to 290 nm; (4) to prepare input data (absorbances) and choose the required output data (Ade and Cyt concentrations); (5) to search for the optimal ANN structure (number of input, hidden, and output neurons) and optimal number of epochs for the adaptation (training) process; (6) to use suitable test data (not included in the training set) for verification and testing; (7) to apply the optimal ANN for analysis of unknown samples. The quality of the prediction for the test set was evaluated on the basis of the average root mean square error for prediction (RMSEP) calculated from given and predicted values of Ade and Cyt concentrations. The data were processed on a Pentium PC computer using TRAJAN Release 3.0D software package from TRAJAN Software LTD (Durham, U. K).
ER  -

TOPINKOVÁ, Jana; Libuše TRNKOVÁ; Marta FARKOVÁ a Josef HAVEL. Description of binary system by artificial neural networks. In \textit{Sborník příspěvků IV.pracovní setkání fyzikálních chemiků a elektrochemiků}. Brno, Česká republika: Masarykova Univerzita v Brně, 2004, s.~39-39. ISBN~80-210-3319-3.

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