Backbone assignment and secondary structure of the PsbQ protein
from Photosystem II

J 2011

Backbone assignment and secondary structure of the PsbQ protein from Photosystem II

HORNIČÁKOVÁ, Michaela, Jaroslava KOHOUTOVÁ, Judith SCHLAGNITWEIT, Christian WOLFSCHLAGER, Rudiger ETTRICH et. al.

Základní údaje

Originální název

Backbone assignment and secondary structure of the PsbQ protein from Photosystem II

Název česky

Přiřazení páteře a sekundární struktura proteinu PsbQ z fotosystému II

Autoři

HORNIČÁKOVÁ, Michaela (703 Slovensko), Jaroslava KOHOUTOVÁ (203 Česká republika), Judith SCHLAGNITWEIT (40 Rakousko), Christian WOLFSCHLAGER (40 Rakousko), Rudiger ETTRICH (40 Rakousko), Radovan FIALA (203 Česká republika, garant, domácí), Wolfgang SCHOEFBERGER (40 Rakousko) a Norbert MÜLLER (40 Rakousko)

Vydání

Biomolecular NMR Assignments, DORDRECHT, SPRINGER, 2011, 1874-2718

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

10600 1.6 Biological sciences

Stát vydavatele

Nizozemské království

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 0.720

Kód RIV

RIV/00216224:14310/11:00052822

Organizační jednotka

Přírodovědecká fakulta

DOI

http://dx.doi.org/10.1007/s12104-011-9293-6

UT WoS

000294559700011

Klíčová slova česky

protein; NMR přiřazení; fotosystém II; PsbQ

Klíčová slova anglicky

protein; NMR assignment; PsbQ

Štítky

AKR, rivok

Změněno: 2. 4. 2012 15:55, doc. RNDr. Radovan Fiala, CSc.

Anotace

ORIG CZ

V originále

PsbQ is one of the extrinsic proteins situated on the lumenal surface of photosystem II (PSII) in the higher plants and green algae. Its three-dimensional structure was determined by X-ray crystallography with exception of the residues 14–33. To obtain further details about its structure and potentially its dynamics, we approached the problem by NMR. In this paper we report 1H, 15N, and 13C NMR assignments for the PsbQ protein. The very challenging oligo-proline stretches could be assigned using 13C-detected NMR experiments that enabled the assignments of twelve out of the thirteen proline residues of PsbQ. The identification of PsbQ secondary structure elements on the basis of our NMR data was accomplished with the programs TALOS+, web server CS23D and CS-Rosetta.

Česky

Článek se zabývá přiřazením NMR spekter proteinu PsbQ z fotosystému II a jeho sekundární strukturou.

Citovat

HORNIČÁKOVÁ, Michaela, Jaroslava KOHOUTOVÁ, Judith SCHLAGNITWEIT, Christian WOLFSCHLAGER, Rudiger ETTRICH, Radovan FIALA, Wolfgang SCHOEFBERGER a Norbert MÜLLER. Backbone assignment and secondary structure of the PsbQ protein from Photosystem II. Biomolecular NMR Assignments. DORDRECHT: SPRINGER, 2011, roč. 5, č. 2, s. 169-175. ISSN 1874-2718. Dostupné z: https://dx.doi.org/10.1007/s12104-011-9293-6.

@article{947152,
   author = {Horničáková, Michaela and Kohoutová, Jaroslava and Schlagnitweit, Judith and Wolfschlager, Christian and Ettrich, Rudiger and Fiala, Radovan and Schoefberger, Wolfgang and Müller, Norbert},
   article_location = {DORDRECHT},
   article_number = {2},
   doi = {http://dx.doi.org/10.1007/s12104-011-9293-6},
   keywords = {protein; NMR assignment; PsbQ},
   language = {eng},
   issn = {1874-2718},
   journal = {Biomolecular NMR Assignments},
   title = {Backbone assignment and secondary structure of the PsbQ protein from Photosystem II},
   url = {http://www.springerlink.com/content/3n38075w5h1l1082/},
   volume = {5},
   year = {2011}
}

TY  - JOUR
ID  - 947152
AU  - Horničáková, Michaela - Kohoutová, Jaroslava - Schlagnitweit, Judith - Wolfschlager, Christian - Ettrich, Rudiger - Fiala, Radovan - Schoefberger, Wolfgang - Müller, Norbert
PY  - 2011
TI  - Backbone assignment and secondary structure of the PsbQ protein from Photosystem II
JF  - Biomolecular NMR Assignments
VL  - 5
IS  - 2
SP  - 169-175
EP  - 169-175
PB  - SPRINGER
SN  - 18742718
KW  - protein
KW  - NMR assignment
KW  - PsbQ
UR  - http://www.springerlink.com/content/3n38075w5h1l1082/
N2  - PsbQ is one of the extrinsic proteins situated on the lumenal surface of photosystem II (PSII) in the higher plants and green algae. Its three-dimensional structure was determined by X-ray crystallography with exception of the residues 14–33. To obtain further details about its structure and potentially its dynamics, we approached the problem by NMR. In this paper we report 1H, 15N, and 13C NMR assignments for the PsbQ protein. The very challenging oligo-proline stretches could be assigned using 13C-detected NMR experiments that enabled the assignments of twelve out of the thirteen proline residues of PsbQ. The identification of PsbQ secondary structure elements on the basis of our NMR data was accomplished with the programs TALOS+, web server CS23D and CS-Rosetta.
ER  -

HORNIČÁKOVÁ, Michaela, Jaroslava KOHOUTOVÁ, Judith SCHLAGNITWEIT, Christian WOLFSCHLAGER, Rudiger ETTRICH, Radovan FIALA, Wolfgang SCHOEFBERGER a Norbert MÜLLER. Backbone assignment and secondary structure of the PsbQ protein from Photosystem II. \textit{Biomolecular NMR Assignments}. DORDRECHT: SPRINGER, 2011, roč.~5, č.~2, s.~169-175. ISSN~1874-2718. Dostupné z: https://dx.doi.org/10.1007/s12104-011-9293-6.

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