| VOREL, Jiří, Dagmar JIRSOVÁ, Jana ILGOVÁ, Pavel ROUDNICKÝ, Hynek STRNAD, Lucie JEDLIČKOVÁ, Hana DVOŘÁKOVÁ, Karolína SKIPALOVÁ, Libor MIKEŠ, Petr BROŽ, Roman LEONTOVYČ, Ewa DZIKA, Božena KOUBKOVÁ, Milan GELNAR a Martin KAŠNÝ. Terra incognita – sequencing projects of monogeneans parasites. In Grid computing workshop. 2015. |
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@proceedings{1319619,
author = {Vorel, Jiří and Jirsová, Dagmar and Ilgová, Jana and Roudnický, Pavel and Strnad, Hynek and Jedličková, Lucie and Dvořáková, Hana and Skipalová, Karolína and Mikeš, Libor and Brož, Petr and Leontovyč, Roman and Dzika, Ewa and Koubková, Božena and Gelnar, Milan and Kašný, Martin},
booktitle = {Grid computing workshop},
keywords = {NGS; Monogenea; genome; transcriptome},
language = {eng},
title = {Terra incognita – sequencing projects of monogeneans parasites},
url = {http://metavo.metacentrum.cz/cs/seminars/seminar2015/index.html},
year = {2015}
}
TY - CONF
ID - 1319619
AU - Vorel, Jiří - Jirsová, Dagmar - Ilgová, Jana - Roudnický, Pavel - Strnad, Hynek - Jedličková, Lucie - Dvořáková, Hana - Skipalová, Karolína - Mikeš, Libor - Brož, Petr - Leontovyč, Roman - Dzika, Ewa - Koubková, Božena - Gelnar, Milan - Kašný, Martin
PY - 2015
TI - Terra incognita – sequencing projects of monogeneans parasites
KW - NGS
KW - Monogenea
KW - genome
KW - transcriptome
UR - http://metavo.metacentrum.cz/cs/seminars/seminar2015/index.html
N2 - Parasitic monogeneans are important blood sucking fish ectoparasites. Their presence can lead to significant losses in fish stocks. Our understanding to the biological processes of monogeneans is based also on detailed knowledge of their molecular biology and biochemistry. By using the modern sequencing methods and computer databases (genomic, transcriptomic and proteomic) we can now faster and more accurately identify numerous sets of protein molecules which are essential for life of these parasites. From a large group of Monogenea (assume the existence up to 25 000 species). Only one species has was deeply sequenced – genome of Gyrodactylus salaris (Monogenea: Gyrodactylidae) from 2014. We would like to change this situation and therefore we adopted Eudiplozoon nipponicum (Monogenea: Diplozoidae) as a model organism and started some preliminary analyses leaded to generation of E. nipponicum genome, transcriptome and proteome databases.
ER -
VOREL, Jiří, Dagmar JIRSOVÁ, Jana ILGOVÁ, Pavel ROUDNICKÝ, Hynek STRNAD, Lucie JEDLIČKOVÁ, Hana DVOŘÁKOVÁ, Karolína SKIPALOVÁ, Libor MIKEŠ, Petr BROŽ, Roman LEONTOVYČ, Ewa DZIKA, Božena KOUBKOVÁ, Milan GELNAR a Martin KAŠNÝ. Terra incognita – sequencing projects of monogeneans parasites. In \textit{Grid computing workshop}. 2015.
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