Filtrování

    2026

    1. Balancing speed and precision in protein folding: a comparison of AlphaFold2, ESMFold, and OmegaFold J - Článek v odborném periodiku
      HÝSKOVÁ, Anna; Eva MARŠÁLKOVÁ a Petr ŠIMEČEK. Balancing speed and precision in protein folding: a comparison of AlphaFold2, ESMFold, and OmegaFold. Frontiers in Genetics. FRONTIERS MEDIA SA, 2026, roč. 16, January, s. 1-10. ISSN 1664-8021. Dostupné z: https://doi.org/10.3389/fgene.2025.1715037.
      Podrobněji: https://is.muni.cz/publication/2557849/cs

    2024

    1. Knot or not? Identifying unknotted proteins in knotted families with sequence-based Machine Learning model J - Článek v odborném periodiku
      SIKORA, Maciej; Eva KLIMENTOVÁ; Dawid UCHAL; Denisa ŠRÁMKOVÁ; Agata P PERLINSKA; Mai Lan NGUYEN; Marta KORPACZ; Roksana MALINOWSKA; Szymon NOWAKOWSKI; Pawel RUBACH; Petr ŠIMEČEK a Joanna I SULKOWSKA. Knot or not? Identifying unknotted proteins in knotted families with sequence-based Machine Learning model. Protein Science. HOBOKEN: WILEY, 2024, roč. 33, č. 7, s. 1-21. ISSN 0961-8368. Dostupné z: https://doi.org/10.1002/pro.4998.
      Podrobněji: https://is.muni.cz/publication/2420557/cs

    2023

    1. Genomic benchmarks: a collection of datasets for genomic sequence classification J - Článek v odborném periodiku
      GREŠOVÁ, Katarína; Vlastimil MARTINEK; David ČECHÁK; Petr ŠIMEČEK a Panagiotis ALEXIOU. Genomic benchmarks: a collection of datasets for genomic sequence classification. BMC Genomic Data. 2730-6844: BMC, 2023, roč. 24, č. 1, s. 1-9. ISSN 2730-6844. Dostupné z: https://doi.org/10.1186/s12863-023-01123-8.
      Podrobněji: https://is.muni.cz/publication/2300026/cs

    2022

    1. Genic and chromosomal components of Prdm9-driven hybrid male sterility in mice (Mus musculus) J - Článek v odborném periodiku
      VALISKOVA, Barbora; Sona GREGOROVA; Diana LUSTYK; Petr ŠIMEČEK; Petr JANSA a Jiri FOREJT. Genic and chromosomal components of Prdm9-driven hybrid male sterility in mice (Mus musculus). Genetics. BETHESDA (USA): GENETICS SOCIETY AMERICA, 2022, roč. 222, č. 1, s. 1-14. ISSN 0016-6731. Dostupné z: https://doi.org/10.1093/genetics/iyac116.
      Podrobněji: https://is.muni.cz/publication/2251936/cs
    2. Genomic Benchmarks: A Collection of Datasets for Genomic Sequence Classification a - Konferenční abstrakt
      GREŠOVÁ, Katarína; Petr ŠIMEČEK; Vlastimil MARTINEK; David ČECHÁK a Panagiotis ALEXIOU. Genomic Benchmarks: A Collection of Datasets for Genomic Sequence Classification. 2022. ISBN 978-80-7592-127-7.
      Podrobněji: https://is.muni.cz/publication/1883659/cs

    2020

    1. High-throughput sleep phenotyping produces robust and heritable traits in Diversity Outbred mice and their founder strains J - Článek v odborném periodiku
      KEENAN, B.T.; R.J. GALANTE; J. LIAN; Petr ŠIMEČEK; D.M. GATTI; L. ZHANG; D.C. LIM; K.L. SVENSON; G.A. CHURCHILL a A.I. PACK. High-throughput sleep phenotyping produces robust and heritable traits in Diversity Outbred mice and their founder strains. SLEEP. CARY: OXFORD UNIV PRESS INC, 2020, roč. 43, č. 5, s. nestrankovano, 17 s. ISSN 0161-8105. Dostupné z: https://doi.org/10.1093/sleep/zsz278.
      Podrobněji: https://is.muni.cz/publication/1748757/cs
    2. PENGUINN: Precise Exploration of Nuclear G-Quadruplexes Using Interpretable Neural Networks J - Článek v odborném periodiku
      KLIMENTOVÁ, Eva; Jakub POLÁČEK; Petr ŠIMEČEK a Panagiotis ALEXIOU. PENGUINN: Precise Exploration of Nuclear G-Quadruplexes Using Interpretable Neural Networks. Frontiers in Genetics. Lausanne: Frontiers, 2020, roč. 11, OCT, s. 568546-568552. ISSN 1664-8021. Dostupné z: https://doi.org/10.3389/fgene.2020.568546.
      Podrobněji: https://is.muni.cz/publication/1757783/cs
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