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ŠIMARA, Pavel; Irena KOUTNÁ; Stanislav STEJSKAL; Petr KRONTORÁD; Zdeněk RUČKA; Martina PETERKOVÁ and Michal KOZUBEK. Combination of mRNA and protein microarray analysis in complex cell profiling. Neoplasma. Bratislava, Slovensko: AEPress, s.r.o., 2009, 2/2009, No 56, p. 141-149. ISSN 0028-2685.
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BUDINSKÁ, Eva; Eva GELNAROVÁ and Michael G. SCHIMEK. MSMAD: a computationally efficient method for the analysis of noisy array CGH data. Bioinformatics. Oxford University Press, 2009, vol. 25, No 6, p. 703-713. ISSN 1367-4803.
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STEJSKAL, Stanislav; Pavel MATULA; Irena KOUTNÁ; Ondřej DANĚK; Martin MAŠKA and Michal KOZUBEK. The Use of RNA Polymerase II in Epigenetic Analysis. In 3rd EFS Functional Genomics Conference 2008. 2008.
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GARAJOVÁ, Ingrid; Marek SVOBODA; Ondřej SLABÝ; Eva KREJČÍ; Ilona KOCÁKOVÁ; Markéta BEDNAŘÍKOVÁ; Roman ŠEFR and Rostislav VYZULA. DNA microarray analysis of locally advanced rectal adenocarcinomas: prediction of sensitivity to neoadjuvant chemoradiotherapy (DNA microarray analysis of locally advanced rectal adenocarcinomas: prediction of sensitivity to neoadjuvant chemoradiotherapy.). In III. dny diagnostické, prediktivní a experimentální onkologie. Sborník příspěvků. 2007th ed. Olomouc: Solen, 2007, p. 24-24. ISBN 978-80-244-1824-7.
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KILIAN, Joachim; Dion WHITEHEAD; Jakub HORÁK; Dierk WANKE; Stefan WEINL; Oliver BATISTIC; Cecilia D´ANGELO; Erich BORNBERG-BAUER; Jörg KUDLA and Klaus HARTER. The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. The Plant Journal. England: BLACKWELL PUBLISHING, 2007, vol. 50, No 2, p. 347-363. ISSN 0960-7412.
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TransMap Viewer (software)
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SCHIMEK, Michael and Tomáš PAVLÍK. A comparative study of false discovery rate procedures in R. In Proceedings of the 21th International Workshop on Statistical Modelling. Galway, Ireland, 3-7 July 2006. 21st ed. Galway, Ireland: Statistical Modelling Society, 2006, p. 466-473. ISBN 1-86220-180-3.
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ŠERÝ, Omar and Petr ZVOLSKÝ. Historický přehled vzniku molekulární psychiatrie (Historic overview of establishment of molecular psychiatry). Česká a slovenská psychiatrie. Praha: ČLS J.E. Purkyně, 2006, vol. 102, No 5, p. 246-249. ISSN 1212-0383.
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TICHÝ, Boris; M. SVOBODA; Jiří MAYER and Šárka POSPÍŠILOVÁ. Odběr a zpracování vzorků pro expresní DNA čipy (Sample taking and processing for expression DNA microarrays). Klinická onkologie. 2006, vol. 19, suppl, p. 346-350. ISSN 1802-5307.
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BUDINSKÁ, Eva and Eva GELNAROVÁ. A Method for Detecting Breakpoints in Array CGH data. In EnviroInfo Brno 2005. Networking Environmental Information. Part 2. Proceedings of the 19th International Conference Informatics for Environmental Protection. Brno: Masaryk University in Brno, 2005, p. 673 - 676. ISBN 80-210-3780-6.
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KOUTNÁ, Irena; Eva JANSOVÁ; Petr KRONTORÁD; Zbyněk SVOBODA; Michal KOZUBEK and Stanislav KOZUBEK. cDNA Microarray Technology as a Tool for Better Understanding of Progress of Malignant Diseases. In Prague Post Genome Technology Workshop. Prague, Czech Republic: Czech Pattern Recognition Society, 2005, p. 69-72. ISBN 80-01-03239-6.
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LIDMAN, Petr; Zdenko STANÍČEK; Filip PROCHÁZKA; Eva BUDINSKÁ; Jiří JARKOVSKÝ and Ladislav DUŠEK. Projekt EMIL (Effective Microarray IntelLigence): přínos metod umělé inteligence pro analýzu microarrays (Project EMIL (Effective Microarray IntelLigence): benefits of artificial intelligence methods for microarray analysis). In Sborník abstraktů konference se zahraniční účastí. Analytická cytometrie III. Brno: Česká společnost pro analytickou cytologii, 2005, p. 107-108. ISBN 80-239-5155-6.
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LIDMAN, Petr; Zdenko STANÍČEK; Filip PROCHÁZKA; Jan MUŽÍK; Ladislav DUŠEK; Rostislav VYZULA and Pavel ANDRES. Projekt UIRON ("Universal information robot in oncology"): přínos metod umělé inteligence v biomedicíně a klinické praxi (Project UIRON ("Universal information robot in oncology"): benefits of artificial intelligence methods in biomedicine & clinical practice). In Vybrané otázky onkologie IX. Praha: Galén, 2005, p. 143-144. ISBN 80-7262-382-6.
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LIDMAN, Petr; Zdenko STANÍČEK; Filip PROCHÁZKA; Ladislav DUŠEK; Jiří JARKOVSKÝ and Eva BUDINSKÁ. Rule-based systems: employing intelligent computer assistant in biomedicine & clinical practice. In Proceedings of 1st International Summer School on Computational Biology. Brno: Masarykova univerzita, 2005, p. 100-104. ISBN 80-210-3907-8.
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WEINSTOCK, George M.; David ŠMAJS; Petra MATĚJKOVÁ; Michal STROUHAL; Thomas J. ALBERT; Steven J. NORRIS; Timothy PALZKILL and Erica J. SODERGREN. Treponema Genomics. In Molecular Biology of Spirochetes. Praha: Státní zdravotní ústav., 2005, p. 96-100. Volume 373 NATO Science Series. ISBN 1-58603-665-3.