Výpis publikací

POSPÍŠILOVÁ, Petra; Pavla FEDROVÁ; Eliška VRBOVÁ; Christopher M HENNELLY; Farhang AGHAKHANIAN; Kelly L HAWLEY; Everton B BETTIN; Timothy C DAVENPORT; Sylvia M BRUISTEN; Helene C A ZONDAG; Philippe A GRANGE; Nicolas DUPIN; Natasha ARORA; Angel A NODA; Arlene C SENA; Melissa J CAIMANO; Juan C SALAZAR; Jonathan J JULIANO; M Anthony MOODY; Justin D RADOLF; Jonathan B PARR a David ŠMAJS. Analysis of Treponema pallidum subsp. pallidum predicted outer membrane proteins (OMPeomes) in 21 clinical samples: variant sequences are predominantly surface-exposed. mSphere. Washington, DC, USA: American Society for Microbiology, 2025, roč. 10, č. 9, s. 1-16. ISSN 2379-5042. Dostupné z: https://doi.org/10.1128/msphere.00213-25.

HRALA, Matěj; Marina JOSEPH; Martina FLORIANOVÁ; Helena JUŘICOVÁ; Ulrich WERNERY; David ŠMAJS a Juraj BOSÁK. Extraintestinal Escherichia coli from camel carcasses: Phylogroups, serotypes, and markers of virulence. PLoS One. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2025, roč. 20, č. 10, s. 1-14. ISSN 1932-6203. Dostupné z: https://doi.org/10.1371/journal.pone.0334045.

GAMPAWAR, Piyush G.; Manfred G. SAGMEISTER; Daniel RŮŽEK; Nina AQ. SCHWEINTZGER; Edith HOFER; Benno KOHLMAIER; Vendula ŠVENDOVÁ; Petra BOGOVIČ; Joanna M. ZAJKOWSKA; Lenka KRBKOVÁ; Věra ŠTRUNCOVÁ; Aukse MICKIENE; Daniela S. KOHLFÜRST; Astrig SONNLEITNER; Andrea FOŘTOVÁ; Michaela BERÁNKOVÁ; Martina PÝCHOVÁ; Dace ZAVADSKA; Neneh SALAH; Alexander PICHLER; Dalibor SEDLÁČEK; Aleš CHRDLE; Christoph HAUDUM; Barbara OBERMAYER-PIETSCH; Per HOFFMANN; Markus M. NÖTHEN; Mari-Liis TAMMESOO; Andreas METSPALU; Petr HUSA; Karin STIASTNY; Alexander BINDER; Andrea BERGHOLD; Franc STRLE; Martin L. HIBBERD a Werner ZENZ. Genome-wide association study identifies ABCG1 as a susceptibility locus for tick-borne encephalitis. iScience. CAMBRIDGE: CELL PRESS, 2025, roč. 28, č. 12, s. 1-16. ISSN 2589-0042. Dostupné z: https://doi.org/10.1016/j.isci.2025.114017.

SNOPKOVÁ, Kateřina; Eva CHALOUPKOVÁ; Matěj HRALA a David ŠMAJS. Characterization of tailocins of Pragia fontium 24613 and the tailocin loci within the family Budviciaceae. Research in Microbiology. Amsterdam: Elsevier, 2025, roč. 176, 1-2, s. 1-8. ISSN 0923-2508. Dostupné z: https://doi.org/10.1016/j.resmic.2024.104261.

BOSÁK, Juraj; Matěj HRALA; Petr ANDRLA; Eliška VRBOVÁ; Petra POSPÍŠILOVÁ a David ŠMAJS. In vitro analysis of seven syphilis-causing Treponema pallidum strains revealed inherent growth rate differences. Scientific reports. BERLIN: NATURE PORTFOLIO, 2025, roč. 15, č. 1, s. 1-8. ISSN 2045-2322. Dostupné z: https://doi.org/10.1038/s41598-025-18827-9.

BOSÁK, Juraj; Matěj HRALA; Filip SKOKAN; Miroslav NEČAS; Radim STRNADEL; Eliška VRBOVÁ; Petra POSPÍŠILOVÁ; Hana JEDLIČKOVÁ a David ŠMAJS. In vitro isolation of contemporary Treponema pallidum strains directly from clinical samples of syphilis patients. Clinical microbiology and infection. London: Elsevier, 2025, roč. 31, č. 6, s. 1061-1065. ISSN 1198-743X. Dostupné z: https://doi.org/10.1016/j.cmi.2025.03.017.

VRBOVÁ, Eliška; Petra POSPÍŠILOVÁ; Eliška DASTYCHOVÁ; Martina KOJANOVÁ; Miluše KREIDLOVÁ; Daniela VAŇOUSOVÁ; Filip ROB; Přemysl PROCHÁZKA; Alena KRCHŇÁKOVÁ; Vladimír VAŠKŮ; Radim STRNADEL; Olga FAUSTMANNOVÁ; Monika DVOŘÁKOVÁ HEROLDOVÁ; Ivana KUKLOVÁ; Hana ZÁKOUCKÁ a David ŠMAJS. PCR-detection rates of T. pallidum ssp. pallidum in swab samples from the Czech Republic (2004-2022): Combined RPR, IgM, and PCR tests efficiently detect active syphilis. International Journal of Medical Microbiology. MUNICH: ELSEVIER, 2025, roč. 318, March 2025, s. 1-7. ISSN 1438-4221. Dostupné z: https://doi.org/10.1016/j.ijmm.2025.151647.

BOSÁK, Juraj; Matěj HRALA; Klára JANEČKOVÁ; Kateřina HANÁKOVÁ; Petra POSPÍŠILOVÁ; David POTĚŠIL; Petr ANDRLA; Zbyněk ZDRÁHAL a David ŠMAJS. Proteome Analysis of Seven Treponema pallidum subsp. pallidum Strains Grown In Vitro. Journal of Proteome Research. WASHINGTON: AMER CHEMICAL SOC, 2025, roč. 24, č. 12, s. 6091-6100. ISSN 1535-3893. Dostupné z: https://doi.org/10.1021/acs.jproteome.5c00624.

BETTIN, Everton B; Farhang AGHAKHANIAN; Christopher M HENNELLY; Wentao CHEN; Timothy C DAVENPORT; Simon T HACKL; Andre A GRASSMANN; Fabio VARGAS-CELY; Sebastian SILVA; Jonny A GARCIA-LUNA; Lady G RAMIREZ; Yinbo JIANG; Ligang YANG; Heping ZHENG; Bin YANG; Petra POSPÍŠILOVÁ; David ŠMAJS; Mitch M MATOGA; Irving F HOFFMAN; Eduardo LOPEZ-MEDINA; Kay NIESELT; M Anthony MOODY; Arlene C SENA; Juan C SALAZAR; Jonathan B PARR; Melissa J CAIMANO; Kelly L HAWLEY a Justin D RADOLF. Sequence variability of BamA and FadL candidate vaccinogens suggests divergent evolutionary paths of Treponema pallidum outer membrane proteins. Journal of Bacteriology. Washington: American Society for Microbiology, 2025, roč. 207, č. 8, s. 1-21. ISSN 0021-9193. Dostupné z: https://doi.org/10.1128/jb.00159-25.

SNOPKOVÁ, Svatava; Radek SVAČINKA; Petr HUSA a Petr HUSA. Význam perzistující imunitní aktivace a chornické infekce HIV. In Kongres klinické mikrobiologie, infekčních nemocí a epidemiologie, XI. ročník. 2025. ISBN 978-80-88379-51-5.

HRALA, Matěj; Petr ANDRLA; Juraj BOSÁK; Pavla FEDROVÁ; Amir MUGUTDINOV; Renata KARPÍŠKOVÁ; Katerina NEDBALCOVA; Jitka RAICHOVA; Martin FALDYNA; Petr HOŘÍN a David ŠMAJS. Whole genome sequences of nine Taylorella equigenitalis strains isolated in the Czech Republic between 1982-2021: Molecular dating suggests a common ancestor at the time of Roman Empire. Plos one. San Francisco: Public Library of Science, 2025, roč. 20, č. 1, s. 1-14. ISSN 1932-6203. Dostupné z: https://doi.org/10.1371/journal.pone.0315946.

JANEČKOVÁ, Klára; Christian ROOS; Petr ANDRLA; Pavla FEDROVÁ; Nikola TOM; Simone LUEERT; Julius D KEYYU; Idrissa S CHUMA; David ŠMAJS a Sascha KNAUF. Whole-genome sequencing reveals evidence for inter-species transmission of the yaws bacterium among nonhuman primates in Tanzania. PLOS NEGLECTED TROPICAL DISEASES. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2025, roč. 19, č. 2, s. 1-19. ISSN 1935-2735. Dostupné z: https://doi.org/10.1371/journal.pntd.0012887.

SVAČINKA, Radek; Svatava SNOPKOVÁ; Petr HUSA a Petr HUSA. Změny imunologické odpovědi při léčbě infekce HIV. In Kongres klinické mikrobiologie, infekčních nemocí a epidemiologie, XI. ročník. 2025. ISBN 978-80-88379-51-5.

SVAČINKA, Radek; David VYDRÁŘ; Petr HUSA; Svatava SNOPKOVÁ a Petr HUSA. Benefity a limity antiretrovirové léčby. In 10. Český kongres o HIV/AIDS s mezinárodní účastí. 2024.

POSPÍŠILOVÁ, Petra; Juraj BOSÁK; Matěj HRALA; Eliška VRBOVÁ; Pavla FEDROVÁ a David ŠMAJS. Ceftriaxone resistance of T. pallidum introduced by natural in vitro mutagenesis. In The third annual meeting of the National Institute of Virology and Bacteriology (NIVB). 2024.

SEÑA, Arlene C; Mitch M MATOGA; Ligang YANG; Eduardo LOPEZ-MEDINA; Farhang AGHAKHANIAN; Jane S CHEN; Everton B BETTIN; Melissa J CAIMANO; Wentao CHEN; Jonny A GARCIA-LUNA; Christopher M HENNELLY; Edward JERE; Yinbo JIANG; Jonathan J JULIANO; Petra POSPÍŠILOVÁ; Lady RAMIREZ; David ŠMAJS; Joseph D TUCKER; Fabio Vargas CELY; Heping ZHENG; Irving F HOFFMAN; Bin YANG; M Anthony MOODY; Kelly L HAWLEY; Juan C SALAZAR; Justin D RADOLF a Jonathan B PARR. Clinical and genomic diversity of Treponema pallidum subspecies pallidum to inform vaccine research: an international, molecular epidemiology study. The Lancet Microbe. AMSTERDAM: ELSEVIER, 2024, roč. 5, č. 9, s. 1-13. ISSN 2666-5247. Dostupné z: https://doi.org/10.1016/S2666-5247(24)00087-9.

SNOPKOVÁ, Svatava. Co přinesla léčba HIV. In XLI. sjezd českých a slovenských alergologů a klinických imunologů. 2024. ISSN 1212-3536.

MEDAPPA, Monica; Petra POSPÍŠILOVÁ; Lucy N JOHN; Camila GONZÁLEZ-BEIRAS; Oriol MITJÀ a David ŠMAJS. Coinfection of a yaws patient with two closely related Treponema pallidum subsp. pertenue strains: A rare event with potential evolutionary implications. Acta Tropica. AMSTERDAM: ELSEVIER, 2024, roč. 256, August 2024, s. 1-6. ISSN 0001-706X. Dostupné z: https://doi.org/10.1016/j.actatropica.2024.107254.

KOSEČKOVÁ MICENKOVÁ, Lenka; Kristýna BRODÍKOVÁ; Soňa SMETANOVÁ; Juraj BOSÁK; David ŠMAJS; Petr ANDRLA a Eva BUDINSKÁ. High colonisation by probiotic Escherichia coli A0 34/86 strain is associated with a less diverse microbiome related to children’s age. Beneficial Microbes. Wageningen Academic, 2024, roč. 15, č. 1, s. 5-17. ISSN 1876-2883. Dostupné z: https://doi.org/10.1163/18762891-20220049.

KNAUF, Sascha; Linda HISGEN; Erik O. ÅGREN; Alexander M BARLOW; Marcus FAEHNDRICH; Ulrich VOIGT; Luisa FISCHER; Linda GRILLOVÁ; Luisa K HALLMAIER-WACKER; Marja J L KIK; Jana C KLINK; Jitka KŘENOVÁ; Antonio LAVAZZA; Simone LÜERT; Markéta NOVÁKOVÁ; Darina ČEJKOVÁ; Carlo PACIONI; Tiziana TROGU; David ŠMAJS a Christian ROOS. High prevalence and genetic diversity of Treponema paraluisleporidarum isolates in European lagomorphs. Microbiology spectrum. WASHINGTON: AMER SOC MICROBIOLOGY, 2024, roč. 12, č. 1, s. 1-15. ISSN 2165-0497. Dostupné z: https://doi.org/10.1128/spectrum.01774-23.

MEDAPPA, Monica; Petra POSPÍŠILOVÁ; Maria Paula M MADRUGA; Lucy N JOHN; Camila G BEIRAS; Linda GRILLOVÁ; Jan OPPELT; Arka BANERJEE; Marti VALL-MAYANS; Oriol MITJA a David ŠMAJS. Low genetic diversity of Treponema pallidum ssp. pertenue (TPE) isolated from patients’ ulcers in Namatanai District of Papua New Guinea: Local human population is infected by three TPE genotypes. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2024, roč. 18, č. 1, s. 1-17. ISSN 1935-2735. Dostupné z: https://doi.org/10.1371/journal.pntd.0011831.

VRBOVÁ, Eliška; Petra POSPÍŠILOVÁ; Eliška DASTYCHOVÁ; Martina KOJANOVA; Miluse KREIDLOVA; Filip ROB; Vladimír VAŠKŮ; Petra MOSIO; Radim STRNADEL; Olga FAUSTMANNOVA; Ivana KUKLOVA; Monika DVOŘÁKOVÁ HEROLDOVÁ; Hana ZAKOUCKA a David ŠMAJS. Majority of Treponema pallidum ssp. pallidum MLST allelic profiles in the Czech Republic (2004–2022) belong to two SS14-like clusters. Scientific Reports. BERLIN: NATURE RESEARCH, 2024, roč. 14, č. 1, s. 1-9. ISSN 2045-2322. Dostupné z: https://doi.org/10.1038/s41598-024-68656-5.

MEDAPPA, Monica; Petra POSPÍŠILOVÁ; Lucy N JOHN; Camila GONZÁLEZ-BEIRAS; Marti VALL-MAYANS; Oriol MITJÀ a David ŠMAJS. Sequence typing of Haemophilus ducreyi isolated from patients in the Namatanai region of Papua New Guinea: Infections by Class I and Class II strain types differ in ulcer duration and resurgence of infection after azithromycin treatment. PLOS Neglected Tropical Diseases. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2024, roč. 18, č. 8, s. 1-16. ISSN 1935-2735. Dostupné z: https://doi.org/10.1371/journal.pntd.0012398.

VRBOVÁ, Eliška; Helene ZONDAG; Sylvia BRUISTEN a David ŠMAJS. The Arg753Gln Polymorphisms in Toll-like Receptor 2 in a Syphilis-Infected and Control Population in The Netherlands: Can Differences in the Number of Self-Reported Sexual Contacts Indicate Protection against Syphilis? Venerology. Basel: MDPI, 2024, roč. 3, č. 1, s. 1-9. ISSN 2674-0710. Dostupné z: https://doi.org/10.3390/venereology3010003.

POSPÍŠILOVÁ, Petra; Darina ČEJKOVÁ; Pavla BURŠÍKOVÁ; Pavla FEDROVÁ; Lenka MIKALOVÁ; David NAJT; Nikola TOM; Linda HISGEN; Simone LUEERT; Johannes T LUMEIJ; Erik O ÅGREN; Sascha KNAUF a David ŠMAJS. The hare syphilis agent is related to, but distinct from, the treponeme causing rabbit syphilis. PLoS One. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2024, roč. 19, č. 8, s. 1-15. ISSN 1932-6203. Dostupné z: https://doi.org/10.1371/journal.pone.0307196.

BOSÁK, Juraj; Lenka MIKALOVÁ; Matěj HRALA; Petra POSPÍŠILOVÁ; Martin FALDYNA a David ŠMAJS. Treponema pallidum subsp. pallidum strains DAL-1 and Philadelphia 1 differ in generation times in vitro as well as during experimental rabbit infection. Plos One. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2024, roč. 19, č. 5, s. 1-12. ISSN 1932-6203. Dostupné z: https://doi.org/10.1371/journal.pone.0304033.

SEREME, Youssouf; Sandra Madariaga ZARZA; Hacène MEDKOUR; Soraya MEZOUAR; Laia DOTRAS; Amanda BARCIELA; R Adriana HERNANDEZ-AGUILAR; Joana VITTE; David ŠMAJS; Meriem LOUNI; Baptiste MULOT; Antoine LECLERC; Guéry JEAN-PASCAL; Nicolas ORAIN; Georges DIATTA; Cheikh SOKHNA; Didier RAOULT; Bernard DAVOUST; Florence FENOLLAR a Oleg MEDIANNIKOV. Treponematosis in critically endangered Western chimpanzees (Pan troglodytes verus) in Senegal. One Health. AMSTERDAM: ELSEVIER, 2024, roč. 18, June 2024, s. 1-9. ISSN 2352-7714. Dostupné z: https://doi.org/10.1016/j.onehlt.2024.100694.

MEDAPPA, Monica; Petra POSPÍŠILOVÁ; Oriol MITJA; Camila GONZALEZ-BEIRAS a David ŠMAJS. Co-infection with two closely related Treponema pallidum subsp. pertenue strains in a yaws patient from Namatanai, Papua New Guinea. 2023.

FEDROVÁ, Pavla; Matěj HRALA; Nikola TOM; Lenka KOSEČKOVÁ MICENKOVÁ; Andrea M. A. NASCIMENTO; Juraj BOSÁK a David ŠMAJS. Complete genome sequences of five Escherichia coli strains with probiotic attributes. Microbiology Resource Announcements. Washington, D.C.: American Society for Microbiology, 2023, roč. 12, č. 9, s. 1-3. ISSN 2576-098X. Dostupné z: https://doi.org/10.1128/MRA.00363-23.

SNOPKOVÁ, Svatava a Petr HUSA. Důsledky vysoce supresivní léčby infekce HIV. Vnitrni Lekarstvi. Olomouc: Solen Medical Education, 2023, roč. 69, č. 5, s. 289-292. ISSN 0042-773X. Dostupné z: https://doi.org/10.36290/vnl.2023.057.

BOSÁK, Juraj; Darina KOHOUTOVÁ; Matěj HRALA; Paula MORÁVKOVÁ; Stanislav RAJCHRT; Jan BUREŠ a David ŠMAJS. Escheria Coli differs in virulence-associated genes between patients with colorectal neoplazma and healthy controls. 2023.

HRALA, Matěj; Juraj BOSÁK; Marina JOSEPH; Martina FLORIANOVÁ; Helena JUŘICOVÁ; Ulrich WERNERY a David ŠMAJS. Extraintestinal pathogenic Escherichia coli in camels: Characteristics and sources of infection. 2023.

VYDRÁŘ, David; Svatava SNOPKOVÁ; Radek SVAČINKA; Petr HUSA; Lenka KOSEČKOVÁ MICENKOVÁ; Jan BÖHM a Petr HUSA. Gut microbiota changes - dysbiotic senescence pattern in the context of viral suppression. In EACS 2023. 2023.

BOSÁK, Juraj; Matěj HRALA; Eliška VRBOVÁ; Monica MEDAPPA; Petra POSPÍŠILOVÁ a David ŠMAJS. In vitro cultivation of Treponema Pallidum: New tool to study physiology and genetics of the syphilis agent. In NIVB Meeting 2023. 2023.

MEDAPPA, Monica; Petra POSPÍŠILOVÁ; Maria M FERNANDES; Lucy N JOHN; Camila G BEIRAS; Linda GRILLOVÁ; Jan OPPELT; Arka BANERJEE; Marti VALL-MAYANS; Oriol MITJÀ a David ŠMAJS. Low genetic diversity of Treponema pallidum ssp. pertenue (TPE) isolated from patients’ ulcers in Namatanai District of Papua New Guinea. 2023.

SNOPKOVÁ, Svatava; Radek SVAČINKA; Petr HUSA; Lenka KOSEČKOVÁ MICENKOVÁ; Jan BÖHM a Petr HUSA. Luminální mikrobiota u lidí žijících s HIV – deplece producentů SCFA. In KMINE 2023 – IX. Kongres klinické mikrobiologie, infekčních nemocí a epidemiologie. 2023.

SNOPKOVÁ, Svatava; Radek SVAČINKA; David VYDRÁŘ; Petr HUSA; Tereza KOPŘIVOVÁ; Jakub VLAŽNÝ a Petr HUSA. Plicní koinfekce cytomegalovirem. Klinicka Mikrobiologie a Infekcni Lekarstvi. Trios s.r.o., 2023, roč. 29, č. 3, s. 80-87. ISSN 1211-264X.

SNOPKOVÁ, Svatava; Radek SVAČINKA; David VYDRÁŘ; Petr HUSA; Tereza KOPŘIVOVÁ; Jakub VLAŽNÝ a Petr HUSA. Pneumocystová pneumonie. Klinická mikrobiologie a infekční lékařství. Praha: Trios s.r.o., 2023, roč. 29, č. 3, s. 69-79. ISSN 1211-264X.

POSPÍŠILOVÁ, Petra; Pavla FEDROVÁ; Nikola TOM a David ŠMAJS. RNAseq of Treponema Pallidum during experimental rabbit infection. 2023.

HUSA, Petr; Petr HUSA; Svatava SNOPKOVÁ; David VYDRÁŘ; Lenka KOSEČKOVÁ MICENKOVÁ a Jan BÖHM. Střevní mikrobiota u splenektomovaných pacientů. In Kongres klinické mikrobiologie, infekčního lékařství a epidemiologie (KMINE). 2023.

JANEČKOVÁ, Klára; Christian ROOS; Pavla FEDROVÁ; Nikola TOM; Darina CEJKOVA; Simone LUEERT; Julius D KEYYU; Idrissa S CHUMA; Sascha KNAUF a David ŠMAJS. The genomes of the yaws bacterium, Treponema pallidum subsp. pertenue, of nonhuman primate and human origin are not genomically distinct. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2023, roč. 17, č. 9, s. 1-21. ISSN 1935-2735. Dostupné z: https://doi.org/10.1371/journal.pntd.0011602.

POSPÍŠILOVÁ, Petra; Darina ČEJKOVÁ; Pavla HAVLÍČKOVÁ; Pavla FEDROVÁ; Lenka MIKALOVÁ; David NAJT; Nikola TOM; Linda HIGSEN; Simona LUEERT; Johannes T. LUMEIJ; Erik O. ARGEN; Sascha KNAUF a David ŠMAJS. Whole Genome Sequence of Treponema Paraluisleporidarum Ecovar Lepus, Strain V3603-13. 2023.

BOSÁK, Juraj; Darina KOHOUTOVÁ; Matěj HRALA; Paula MORÁVKOVÁ; Stanislav REJCHRT; Jan BUREŠ a David ŠMAJS. CHARACTERIZATION OF ESCHERICHIA COLI ISOLATES FROM PATIENTS WITH COLON CANCER. In NIVB Meeting 2022. 2022.

POSPÍŠILOVÁ, Petra; Pavla FEDROVÁ; Eliška VRBOVÁ; Nikola TOM a David ŠMAJS. MINION AS A TOOL FOR SEQUENCING OF VARIABLE AND PARALOGOUS GENOMIC LOCI OF TREPONEMA PALLIDUM. In NIVB Meeting 2022. 2022.

POSPÍŠILOVÁ, Petra; Juraj BOSÁK; Eliška VRBOVÁ; Matěj HRALA a David ŠMAJS. Syphilis causing strains: differences in growth rates and patients infection characteristics. In NIVB Meeting 2022 30th November - 2 nd December, 2022 Kutná Hora, Czech Republic. 2022. ISSN 2336-7202.

ŠMAJS, David. Syphilis causing strains: differences in growth rates and patients infection characteristics. In NIVB Meeting 2022 30th November - 2nd December, 2022 Kutná Hora, Czech Republic. 2022.