Výpis publikací

ŠEBESTA, Marek; Karel ŠKUBNÍK; William Shakespeare MORTON; Kateřina LINHARTOVÁ; Veronika KLÁPŠŤOVÁ; Jiří NOVÁČEK; Karel KUBÍČEK; Robert VÁCHA a Richard ŠTEFL. Mechanism of RNA polymerase II elongation complex condensation. In EMBO Workshop: In situ structural biology: expanding the toolbox for structural cell biology, Heidelberg. 2025.

NOVÁČEK, Jiří; Pavel KŘEPELKA; David MAKOVSKÝ a Karel ŠKUBNÍK. TarMi (Target and Mill). 2025.

ISHEMGULOVA, Aygul; Liya MUKHAMEDOVA; Zuzana TREBICHALSKÁ; Veronika ŠEMBEROVÁ RÁJECKÁ; Pavel PAYNE; Lenka ŠMERDOVÁ; Jana MORAVCOVÁ; Dominik HREBÍK; David BUCHTA; Karel ŠKUBNÍK; Tibor FÜZIK; Štěpánka VAŇÁČOVÁ; Jiří NOVÁČEK a Pavel PLEVKA. Endosome rupture enables enteroviruses from the family Picornaviridae to infect cells. Communications Biology. BERLIN: Nature Research, 2024, roč. 7, č. 1, s. 1-12. ISSN 2399-3642. Dostupné z: https://doi.org/10.1038/s42003-024-07147-9.

ŠEBESTA, Marek; Karel ŠKUBNÍK; William Shakespeare MORTON; Marek KRAVEC; Kateřina LINHARTOVÁ; Veronika KLÁPŠŤOVÁ; Jiří NOVÁČEK; Karel KUBÍČEK; Vítězslav BRYJA; Robert VÁCHA a Richard ŠTEFL. Mechanisms of transcription attenuation and condensation of RNA polymerase II by RECQ5 helicase. In 29th Annual International Conference RNA 2024, Edinburg. 2024.

SOLTYSOVA, Marketa; Jana SKERLOVA; Petr PACHL; Karel ŠKUBNÍK; Milan FABRY; Irena SIEGLOVA; Martina FAROLFI; Irina GRISHKOVSKAYA; Michal BABIAK; Jiří NOVÁČEK; Libor KRASNY a Pavlina REZACOVA. Structural characterization of two prototypical repressors of SorC family reveals tetrameric assemblies on DNA and mechanism of function. Nucleic acids research. Oxford: Oxford University Press, 2024, roč. 52, č. 12, s. 7305-7320. ISSN 0305-1048. Dostupné z: https://doi.org/10.1093/nar/gkae434.

ČERNÝ, Martin; Anna KOZÁKOVÁ; Klára MIKESKOVÁ; Hana ŠANDEROVÁ; Karel ŠKUBNÍK; Libor KRÁSNÝ a Lukáš ŽÍDEK. The interplay of δ-subunit and RNA polymerase in the pre-initiation state. In 7th cryoNET Symposium. 2024.

BÍŇOVSKÝ, Ján; Marta ŠIBOROVÁ; Jiří NOVÁČEK; Karel ŠKUBNÍK; Tibor BOTKA; Martin BENEŠÍK; Roman PANTŮČEK; MARK VAN RAAIJ a Pavel PLEVKA. Conformational changes in baseplate required for genome delivery of S. aureus phage phi812. In 2nd Meeting of the National Institute of Virology and Bacteriology (NIVB) in Kutná Hora, Czech Chemical Society Symposium Series vol. 21, no. 5, s. 177-256. 2023. ISSN 2336-7210.

SUKENÍK, Lukáš; Liya MUKHAMEDOVA; Michaela PROCHÁZKOVÁ; Karel ŠKUBNÍK; Pavel PLEVKA a Robert VÁCHA. Elucidating the Mechanisms of Genome Release in Picornaviruses using Cryo-EM and Coarse-Grained Simulations. In EBSA Congress 2023. 2023.

SIMONOVA, Anna; Veronika ROMANSKA; Barbora BENONI; Karel ŠKUBNÍK; Lenka ŠMERDOVÁ; Michaela PROCHÁZKOVÁ; Kristina SPUSTOVA; Ondrej MORAVCIK; Lenka GAHUROVA; Jan PACES; Pavel PLEVKA a Hana CAHOVA. Honeybee Iflaviruses Pack Specific tRNA Fragments from Host Cells in Their Virions. Chembiochem. WEINHEIM: WILEY-VCH, 2022, roč. 23, č. 17, s. 202200281-202200289. ISSN 1439-4227. Dostupné z: https://doi.org/10.1002/cbic.202200281.

RUSKAMO, Salla; Arne RAASAKKA; Jan Skov PEDERSEN; Anne MARTEL; Karel ŠKUBNÍK; Tamim DARWISH; Lionel PORCAR a Petri KURSULA. Human myelin proteolipid protein structure and lipid bilayer stacking. Cellular and molecular life sciences. BASEL: SPRINGER BASEL AG, 2022, roč. 79, č. 8, s. 419-437. ISSN 1420-682X. Dostupné z: https://doi.org/10.1007/s00018-022-04428-6.

ŠKUBNÍK, Karel; Lukáš SUKENÍK; David BUCHTA; Tibor FÜZIK; Michaela PROCHÁZKOVÁ; Jana MORAVCOVÁ; Lenka ŠMERDOVÁ; Antonín PŘIDAL; Robert VÁCHA a Pavel PLEVKA. Capsid opening enables genome release of iflaviruses. Science advances. New York: American Association for the Advancement of Science, 2021, roč. 7, č. 1, s. 1-9. ISSN 2375-2548. Dostupné z: https://doi.org/10.1126/sciadv.abd7130.

SUKENÍK, Lukáš; Liya MUKHAMEDOVA; Michaela PROCHÁZKOVÁ; Karel ŠKUBNÍK; Pavel PLEVKA a Robert VÁCHA. Cargo Release from Nonenveloped Viruses and Virus-like Nanoparticles: Capsid Rupture or Pore Formation. ACS Nano. Washington, D.C.: American Chemical Society, 2021, roč. 15, č. 12, s. 19233-19243. ISSN 1936-0851. Dostupné z: https://doi.org/10.1021/acsnano.1c04814.

PROCHÁZKOVÁ, Michaela; Karel ŠKUBNÍK; Tibor FÜZIK; Liya MUKHAMEDOVA; A. PRIDAL a Pavel PLEVKA. Virion structures and genome delivery of honeybee viruses. CURRENT OPINION IN VIROLOGY. OXFORD: ELSEVIER SCI LTD, 2020, roč. 45, DEC, s. 17-24. ISSN 1879-6257. Dostupné z: https://doi.org/10.1016/j.coviro.2020.06.007.

HREBÍK, Dominik; Dana ŠTVERÁKOVÁ; Karel ŠKUBNÍK; Tibor FÜZIK; Roman PANTŮČEK a Pavel PLEVKA. Structure and genome ejection mechanism of Staphylococcus aureus phage P68. Science advances. New York: American Association for the Advancement of Science, 2019, roč. 5, č. 10, s. "eaaw7414", 14 s. ISSN 2375-2548. Dostupné z: https://doi.org/10.1126/sciadv.aaw7414.

PROCHÁZKOVÁ, Michaela; Tibor FÜZIK; Karel ŠKUBNÍK; Jana MORAVCOVÁ; Zorica UBIPARIP; A. PRIDAL a Pavel PLEVKA. Virion structure and genome delivery mechanism of sacbrood honeybee virus. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: NATL ACAD SCIENCES, 2018, roč. 115, č. 30, s. 7759-7764. ISSN 0027-8424. Dostupné z: https://doi.org/10.1073/pnas.1722018115.

ŠKUBNÍK, Karel; Jiří NOVÁČEK; Tibor FÜZIK; Antonin PRIDAL; Robert J. PAXTON a Pavel PLEVKA. Structure of deformed wing virus, a major honey bee pathogen. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: National Academy of Sciences, 2017, roč. 114, č. 12, s. 3210-3215. ISSN 0027-8424. Dostupné z: https://doi.org/10.1073/pnas.1615695114.

SABIN, Charles David; Tibor FÜZIK; Karel ŠKUBNÍK; Lenka PÁLKOVÁ; A. Michael LINDBERG a Pavel PLEVKA. Structure of Aichi Virus 1 and Its Empty Particle: Clues to Kobuvirus Genome Release Mechanism. JOURNAL OF VIROLOGY. WASHINGTON: AMER SOC MICROBIOLOGY, 2016, roč. 90, č. 23, s. 10800-10810. ISSN 0022-538X. Dostupné z: https://doi.org/10.1128/JVI.01601-16.