Výpis publikací

TANASA, Sorin, Neha SHUKLA, Albert CAIRO CALZADA, Sri Ranjani GANJI, Pavlína MIKULKOVÁ, Soňa VALUCHOVÁ, Vivek Kumar RAXWAL, Claudio CAPITAO, Arp SCHNITTGER, Zbyněk ZDRÁHAL a Karel ŘÍHA. A complex role of Arabidopsis CDKD;3 in meiotic progression and cytokinesis. Plant Direct. Wiley, 2023, roč. 7, č. 3, s. 1-16. ISSN 2475-4455. Dostupné z: https://dx.doi.org/10.1002/pld3.477.

AHMADLI, Ulkar, Manikandan KALIDASS, Lucie CRHÁK KHAITOVÁ, Joerg FUCHS, Maria CUACOS, Dmitri DEMIDOV, Sheng ZUO, Jana PEČINKOVÁ, Martin MASCHER, Mathieu INGOUFF, Stefan HECKMANN, Andreas HOUBEN, Karel ŘÍHA a Inna LERMONTOVA. High temperature increases centromere-mediated genome elimination frequency and enhances haploid induction in Arabidopsis. Plant Communications. Elsevier, 2023, roč. 4, č. 3, s. 1-13. ISSN 2590-3462. Dostupné z: https://dx.doi.org/10.1016/j.xplc.2022.100507.

RAXWAL, Vivek Kumar a Karel ŘÍHA. The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond. Biochemical Society Transactions. London: Portland Press, 2023, roč. 51, č. 1, s. 31-39. ISSN 0300-5127. Dostupné z: https://dx.doi.org/10.1042/BST20211231.

FULNEČEK, Jaroslav, Eva KLIMENTOVÁ, Albert CAIRO CALZADA, Soňa BUKOVČÁKOVÁ, Panagiotis ALEXIOU, Zbyněk PROKOP a Karel ŘÍHA. The SAP domain of Ku facilitates its efficient loading onto DNA ends. Nucleic Acids Research. Oxford: Oxford University Press, 2023, roč. 51, č. 21, s. 11706-11716. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkad850.

VALUCHOVÁ, Soňa, Pavlína MIKULKOVÁ, Jana PEČINKOVÁ a Karel ŘÍHA. Application of Chemical Inhibitors in Live Cell Imaging of Plant Meiosis Using Light Sheet Fluorescence Microscopy. Humana Press Inc., 2022, s. 93-105. Dostupné z: https://dx.doi.org/10.1007/978-1-0716-2253-7_8.

MOTTA, M.R., X. ZHAO, M. PASTUGLIA, K. BELCRAM, F. ROODBARKELARI, M. KOMAKI, H. HARASHIMA, S. KOMAKI, M. KUMAR, P. BULANKOVA, M. HEESE, Karel ŘÍHA, D. BOUCHEZ a A. SCHNITTGER. B1-type cyclins control microtubule organization during cell division in Arabidopsis. EMBO reports. Hoboken: Wiley-Blackwell, 2022, roč. 23, č. 1, s. „e53995“, 18 s. ISSN 1469-221X. Dostupné z: https://dx.doi.org/10.15252/embr.202153995.

JAROUR, Ester, Karel ŘÍHA a Pavel PLEVKA. Fokus Václava Moravce – Věda jako spása. 2022.

CAIRO CALZADA, Albert, Anna VARGOVÁ, Neha SHUKLA, Claudio CAPITAO, Pavlína MIKULKOVÁ, Soňa VALUCHOVÁ, Jana PEČINKOVÁ, Petra BULANKOVA a Karel ŘÍHA. Meiotic exit in Arabidopsis is driven by P-body-mediated inhibition of translation. Science. WASHINGTON: AMER ASSOC ADVANCEMENT SCIENCE, 2022, roč. 377, č. 6606, s. 629-634. ISSN 0036-8075. Dostupné z: https://dx.doi.org/10.1126/science.abo0904.

RAXWAL, Vivek Kumar, Somya SINGH, Manu AGARWAL a Karel ŘÍHA. Transcriptional and post-transcriptional regulation of young genes in plants. BMC Biology. London: BMC, 2022, roč. 20, č. 1, s. 134-140. ISSN 1741-7007. Dostupné z: https://dx.doi.org/10.1186/s12915-022-01339-7.

CAPITAO, C., Sorin TANASA, Jaroslav FULNEČEK, Vivek Kumar RAXWAL, S. AKIMCHEVA, P. BULANKOVA, Pavlína MIKULKOVÁ, Lucie CRHÁK KHAITOVÁ, M. KALIDASS, I. LERMONTOVA, M. SCHEIDID a Karel ŘÍHA. A CENH3 mutation promotes meiotic exit and restores fertility in SMG7-deficient Arabidopsis. PLoS Genetics. San Francisco: Public Library of Science, 2021, roč. 17, č. 9, s. „e1009779“, 26 s. ISSN 1553-7404. Dostupné z: https://dx.doi.org/10.1371/journal.pgen.1009779.

WATSON, J.M., J. TRIEB, M. TROESTL, K. RENFREW, Terezie MALÍK MANDÁKOVÁ, Jaroslav FULNEČEK, D.E. SHIPPEN a Karel ŘÍHA. A hypomorphic allele of telomerase uncovers the minimal functional length of telomeres in Arabidopsis. Genetics. BETHESDA (USA): GENETICS SOCIETY AMERICA, 2021, roč. 219, č. 2, s. „iyab126“, 9 s. ISSN 0016-6731. Dostupné z: https://dx.doi.org/10.1093/genetics/iyab126.

FULNEČEK, Jaroslav a Karel ŘÍHA. High-Throughput Protein-Nucleic Acid Interaction Assay Based on Protein-Induced Fluorescence Enhancement. Online. In RNA REMODELING PROTEINS. TOTOWA: HUMANA PRESS INC, 2021, s. 109-117. 2 EDITION. ISBN 978-1-0716-0934-7. Dostupné z: https://dx.doi.org/10.1007/978-1-0716-0935-4_7.

VALUCHOVÁ, Soňa, Pavlína MIKULKOVÁ, Jana PEČINKOVÁ, J. KLIMOVA, M. KRUMNIKL, P. BAINAR, S. HECKMANN, P. TOMANCAK a Karel ŘÍHA. Imaging plant germline differentiation within Arabidopsis flowers by light sheet microscopy. elife. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD, 2020, roč. 9, FEB, s. 52546-52564. ISSN 2050-084X. Dostupné z: https://dx.doi.org/10.7554/eLife.52546.

RAXWAL, Vivek Kumar, C.G. SIMPSON, J. GLOGGNITZER, J.C. ENTINZE, W.B. GUO, R.X. ZHANG, J.W.S. BROWN a Karel ŘÍHA. Nonsense-Mediated RNA Decay Factor UPF1 Is Critical for Posttranscriptional and Translational Gene Regulation in Arabidopsis. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2020, roč. 32, č. 9, s. 2725-2741. ISSN 1040-4651. Dostupné z: https://dx.doi.org/10.1105/tpc.20.00244.

JAVORKA, P., Vivek Kumar RAXWAL, J. NAJVAREK a Karel ŘÍHA. artMAP: A user-friendly tool for mapping ethyl methanesulfonate-induced mutations in Arabidopsis. PLANT DIRECT. CHICHESTER: JOHN WILEY & SONS LTD, 2019, roč. 3, č. 6, s. 1-7. ISSN 2475-4455. Dostupné z: https://dx.doi.org/10.1002/pld3.146.

EBERHARD, S., Soňa VALUCHOVÁ, J. RAVAT, Jaroslav FULNEČEK, P. JOLIVET, S. BUJALDON, S.D. LEMAIRE, F.A. WOLLMAN, M.T. TEIXEIRA, Karel ŘÍHA a Z. XU. Molecular characterization of Chlamydomonas reinhardtii telomeres and telomerase mutants. LIFE SCIENCE ALLIANCE. COLD SPRING HARBOR: LIFE SCIENCE ALLIANCE LLC, 2019, roč. 2, č. 3, s. 1-15. ISSN 2575-1077. Dostupné z: https://dx.doi.org/10.26508/lsa.201900315.

CAPITAO, C., Neha SHUKLA, Aneta WANDROLOVÁ, O.M. SCHEID a Karel ŘÍHA. Functional Characterization of SMG7 Paralogs in Arabidopsis thaliana. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2018, roč. 9, NOV, s. 1602-1611. ISSN 1664-462X. Dostupné z: https://dx.doi.org/10.3389/fpls.2018.01602.

VALUCHOVÁ, Soňa, Jaroslav FULNEČEK, Zbyněk PROKOP, Peggy STOLT-BERGNER, Eliška JANOUŠKOVÁ, Ctirad HOFR a Karel ŘÍHA. Protection of Arabidopsis Blunt-Ended Telomeres Is Mediated by a Physical Association with the Ku Heterodimer. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2017, roč. 29, č. 6, s. 1533-1545. ISSN 1040-4651. Dostupné z: https://dx.doi.org/10.1105/tpc.17.00064.

VALUCHOVÁ, Soňa, Jaroslav FULNEČEK, Alexander PETROV, Konstantinos TRIPSIANES a Karel ŘÍHA. A rapid method for detecting protein-nucleic acid interactions by protein induced fluorescence enhancement. Scientific Reports. LONDON: NATURE PUBLISHING GROUP, 2016, roč. 6, December, s. nestránkováno, 10 s. ISSN 2045-2322. Dostupné z: https://dx.doi.org/10.1038/srep39653.

VALUCHOVÁ, Soňa, Elisa DERBOVEN a Karel ŘÍHA. Analysis of Telomeric G -overhangs by in- Gel Hybridization. Bio-protocol. Sunnyvale: Bio-protocol LLC, 2016, roč. 6, č. 7, s. nestránkováno, 9 s. ISSN 2331-8325. Dostupné z: https://dx.doi.org/10.21769/BioProtoc.1775.

KAZDA, Anita, Svetlana AKIMCHEVA, Matthew J. WATSON a Karel ŘÍHA. Cell Proliferation Analysis Using EdU Labeling in Whole Plant and Histological Samples of Arabidopsis. In Marie-Cécile Caillaud. Plant Cell Division - Methods and Protocols. New York: Springer, 2016, s. 169-182. Methods in Molecular Biology, 1370. ISBN 978-1-4939-3141-5. Dostupné z: https://dx.doi.org/10.1007/978-1-4939-3142-2_13.

WATSON, J. Matthew, Alexander PLATZER, Anita KAZDA, Svetlana AKIMCHEVA, Soňa VALUCHOVÁ, Viktoria NIZHYNSKA, Magnus NORDBORG a Karel ŘÍHA. Germline replications and somatic mutation accumulation are independent of vegetative life span in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: National Academy of Sciences, 2016, roč. 113, č. 43, s. 12226-12231. ISSN 0027-8424. Dostupné z: https://dx.doi.org/10.1073/pnas.1609686113.

RAXWAL, Vivek Kumar a Karel ŘÍHA. Nonsense mediated RNA decay and evolutionary capacitance. BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. AMSTERDAM: ELSEVIER SCIENCE BV, 2016, roč. 1859, č. 12, s. 1538-1543. ISSN 1874-9399. Dostupné z: https://dx.doi.org/10.1016/j.bbagrm.2016.09.001.

CIFUENTES, Marta, Sylvie JOLIVET, Laurence CROMER, Hirofumi HARASHIMA, Petra BULANKOVA, Charlotte RENNE, Wayne CRISMANI, Yuko NOMURA, Hirofumi NAKAGAMI, Keiko SUGIMOTO, Arp SCHNITTGER, Karel ŘÍHA a Raphael MERCIER. TDM1 Regulation Determines the Number of Meiotic Divisions. PLOS GENETICS. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2016, roč. 12, č. 2, s. nestránkováno, 22 s. ISSN 1553-7404. Dostupné z: https://dx.doi.org/10.1371/journal.pgen.1005856.

FULCHER, Nick a Karel ŘÍHA. Using Centromere Mediated Genome Elimination to Elucidate the Functional Redundancy of Candidate Telomere Binding Proteins in Arabidopsis thaliana. FRONTIERS IN GENETICS. LAUSANNE: FRONTIERS MEDIA SA, 2016, roč. 6, January, s. nestránkováno, 9 s. ISSN 1664-8021. Dostupné z: https://dx.doi.org/10.3389/fgene.2015.00349.

FULCHER, Nick, Astrid TEUBENBACHER, Envel KERDAFFREC, Ashley FARLOW, Magnus NORDBORG a Karel ŘÍHA. Genetic Architecture of Natural Variation of Telomere Length in Arabidopsis thaliana. Genetics. BETHESDA (USA): GENETICS SOCIETY AMERICA, 2015, roč. 199, č. 2, s. 625-635. ISSN 0016-6731. Dostupné z: https://dx.doi.org/10.1534/genetics.114.172163.

PLECENIKOVA, A., M. SLANINOVA a Karel ŘÍHA. Characterization of DNA Repair Deficient Strains of Chlamydomonas reinhardtii Generated by Insertional Mutagenesis. Plos one. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2014, roč. 9, č. 8, s. "nestránkováno", 9 s. ISSN 1932-6203. Dostupné z: https://dx.doi.org/10.1371/journal.pone.0105482.

FULCHER, N., E. DERBOVEN, S. VALUCHOVA a Karel ŘÍHA. If the cap fits, wear it: an overview of telomeric structures over evolution. Cellular and molecular life sciences. BASEL: BIRKHAUSER VERLAG AG, 2014, roč. 71, č. 5, s. 847-865. ISSN 1420-682X. Dostupné z: https://dx.doi.org/10.1007/s00018-013-1469-z.

GLOGGNITZER, J., S. AKIMCHEVA, A. SRINIVASAN, B. KUSENDA, N. RIEHS, H. STAMPFL, J. BAUTOR, B. DEKROUT, C. JONAK, J.M. JIMENEZ-GOMEZ, J.E. PARKER a Karel ŘÍHA. Nonsense-Mediated mRNA Decay Modulates Immune Receptor Levels to Regulate Plant Antibacterial Defense. CELL HOST & MICROBE. CAMBRIDGE: CELL PRESS, 2014, roč. 16, č. 3, s. 376-390. ISSN 1931-3128. Dostupné z: https://dx.doi.org/10.1016/j.chom.2014.08.010.

DERBOVEN, E., H. EKKER, B. KUSENDA, Petra BULÁNKOVÁ a Karel ŘÍHA. Role of STN1 and DNA Polymerase alpha in Telomere Stability and Genome-Wide Replication in Arabidopsis. PLoS Genetics. San Francisco, California, United States: Public Library Science, 2014, roč. 10, č. 10, s. "nestránkováno", 13 s. ISSN 1553-7390. Dostupné z: https://dx.doi.org/10.1371/journal.pgen.1004682.

SAMANIC, Ivica, Juraj SIMUNIC, Karel ŘÍHA a Jasna PUIZINA. Evidence for Distinct Functions of MRE11 in Arabidopsis Meiosis. PLOS ONE. Public Library of Science, 2013, roč. 8, č. 10, s. "nestránkováno", 12 s. ISSN 1932-6203. Dostupné z: https://dx.doi.org/10.1371/journal.pone.0078760.

VRBSKÝ, Jan, Karel ŘÍHA, Svetlana AKIMCHEVA a James Matthew WATSON. siRNA-mediated methylation of Arabidopsis telomeres. PLoS Genetics. Public Library of Science, 2010, roč. 6.2010, 6/6, 12 s. ISSN 1553-7390.

ŘÍHA, Karel, Thomas MCKNIGHT, Jiří FAJKUS, Boris VYSKOT a Dorothy E. SHIPPEN. Analysis of the G-overhang structures on plant telomeres: evidence for two distinct telomere architectures. The Plant Journal. Velká Británie: Blackwell Science Ltd, 2000, roč. 23, č. 5, s. 633-641. ISSN 0960-7412.

ŘÍHA, Karel, Boris VYSKOT, Jiří FAJKUS a Dorothy SHIPPEN. Telomerase activity, telomere length and telomere structure in the dicot plant silene latifolia. In Abstracts of telomeres and telomerase meeting. 1. vyd. Cold Spring Harbor: CSH Laboratory, 1999, s. 132.

ŘÍHA, Karel, Jiří FAJKUS, Jiří ŠIROKÝ a Boris VYSKOT. Developmental Control of Telomere Lengths and Telomerase Activity in Plants. The Plant Cell. American Society of Plant Physiologists, 1998, roč. 10, č. 10, s. 1691-1698. ISSN 1040-4651.

ŘÍHA, Karel, Jiří FAJKUS, Jiří ŠIROKÝ a Boris VYSKOT. Developmenthal control of telomere lengths and telomerase activity in plants. In 1st European workshop. 1. vyd. Germany: 1st European workshop, 1998, s. -, 1 s.

HORÁKOVÁ, Mirka, Jana FULNEČKOVÁ, Helena ROBEŠOVÁ, Karel ŘÍHA a Jiří FAJKUS. Dynamics of plant telomeres. In 15th International Workshop on the Cell Nucleus. 15. vyd. Quebec, Canada: The Wilhelm Bernhard Workshop, 1998, s. 95-96.

FAJKUS, Jiří, Jana FULNEČKOVÁ, Mirka HORÁKOVÁ, Klára POLÁČKOVÁ, Karel ŘÍHA a Roman MATYÁŠEK. Plant cells express telomerase activity upon transfer to callus culture, without extensively changing telomere lengths. Molecular and General Genetics. 1998, roč. 260, č. 5, s. 470-474. ISSN 0026-8925.

FAJKUS, Jiří, Karel ŘÍHA, Jana FULNEČKOVÁ, Mirka HORÁKOVÁ a Klára POLÁČKOVÁ. Telomere dynamics during plant development. In Dynamic organization of nuclear function. -. New York: Cold Spring Harbor Laboratory, 1998, s. 89.

FAJKUS, Jiří, Jana FULNEČKOVÁ, Mirka HORÁKOVÁ, Klára POLÁČKOVÁ, Karel ŘÍHA a Roman MATYÁŠEK. Telomere dynamics during plant differentiation and dedifferentiation. In 1st European workshop. 1. vyd. Germany: 1st European workshop, 1998, s. 42.