Výpis publikací

BERÁNKOVÁ, Michaela; Jiří HOLOUBEK; Václav HÖNIG; Zuzana MATUSOVA; Martin PALUS; Jiří SALÁT; Imtissal KRAYEM; Jarmila VOJTISKOVA; Pavel SVOBODA; Veronika PRANCLOVA; Lukas VALIHRACH; Peter DEMANT; Marie LIPOLDOVA a Daniel RŮŽEK. Genotype-driven sensitivity of mice to tick-borne encephalitis virus correlates with differential host responses in peripheral macrophages and brain. Journal of Neuroinflammation. BioMed Central Ltd, 2025, roč. 22, č. 1, s. 1-17. ISSN 1742-2094. Dostupné z: https://doi.org/10.1186/s12974-025-03354-1.

ROSENDAL, Ebba; Kyrylo BISIKALO; Stefanie MA WILLEKENS; Marie LINDGREN; Jiří HOLOUBEK; Pavel SVOBODA; Amanda LAPPALAINEN; Ebba KÖNIGHOFER; Ekaterina MIRGORODSKAYA; Rickard NORDÉN; Federico MORINI; William ROSENBAUM; Daniel RŮŽEK; Ulf AHLGREN; Maria ANASTASINA; Andres MERITS; Sarah J BUTCHER; Emma NILSSON a Anna K ÖVERBY. Influence of the pre-membrane and envelope proteins on structure, pathogenicity, and tropism of tick-borne encephalitis virus. Journal of Virology. American Society for Microbiology, 2025, roč. 99, č. 9, s. "e00870-25", 23 s. ISSN 0022-538X. Dostupné z: https://doi.org/10.1128/jvi.00870-25.

HOLOUBEK, Jiří; Jiří SALÁT; Milos MATKOVIC; Petr BEDNÁŘ; Pavel NOVOTNÝ; Martin HRADILEK; Taťána MAJEROVÁ; Ebba ROSENDAL; Luděk EYER; Andrea FOŘTOVÁ; Michaela BERÁNKOVÁ; Lesley BELL-SAKYI; Anna K ÖVERBY; Andrea CAVALLI; Massimiliano BONOMI; Felix A REY a Daniel RŮŽEK. Irreversible furin cleavage site exposure renders immature tick-borne flaviviruses fully infectious. Nature Communications. Nature Research, 2025, roč. 16, č. 1, s. 7491-7507. ISSN 2041-1723. Dostupné z: https://doi.org/10.1038/s41467-025-62750-6.

MARYEWSKI, Xenia A.; Maxim S. KRASILNIKOV; Petra STRAKOVÁ; Jiří HOLOUBEK; Tereza FRČKOVÁ; Irina S. PANINA; Nikolay A. KRYLOV; Daniil A. GVOZDEV; Vladislav S. DENISOV; Alexey N. SEMENOV; Natalia Y. LOTOSH; Alla A. SELISHCHEVA; Alexey A. CHISTOV; Evgeny L. GULYAK; Grigory L. KOZHEMYAKIN; Vladimir A. KORSHUN; Roman G. EFREMOV; Alexey V. USTINOV; Daniel RŮŽEK; Luděk EYER a Vera A. ALFEROVA. Membrane-Active Singlet Oxygen Photogenerators as a Paradigm for Broad-Spectrum Antivirals: The Case of Halogenated (BOron)-DIPYrromethenes. ACS Applied Materials and Interfaces. American Chemical Society, 2025, roč. 17, č. 3, s. 4502-4528. ISSN 1944-8244. Dostupné z: https://doi.org/10.1021/acsami.4c17482.

BERÁNKOVÁ, Michaela; Simone LEONI; Jan HAVIERNIK; Jiří HOLOUBEK a Daniel RŮŽEK. Seeing is Believing: 3D Mapping of Tick-Borne Encephalitis Virus Distribution in Mouse Brain Using TurboGFP Reporter Virus. In NIVB Meeting 2025. 2025.

DVOŘÁK, Michal; Dominik ARBON; Jiří SALÁT; Andrea FOŘTOVÁ; David Pajuelo REGUERA; Tereza FRČKOVÁ; Jiří HOLOUBEK; Jana BALOUNOVA; Jan PROCHAZKA; Radislav SEDLACEK a Daniel RŮŽEK. Sex-dependent impairment of antibody responses to tick-borne encephalitis virus vaccination and infection in obese mice. JOURNAL OF GENERAL VIROLOGY. LONDON: MICROBIOLOGY SOC, 2025, roč. 106, č. 10, s. 1-12. ISSN 0022-1317. Dostupné z: https://doi.org/10.1099/jgv.0.002161.

BERÁNKOVÁ, Michaela; Simone LEONI; Jiří HOLOUBEK; Jan HAVIERNIK; Jiří SALÁT; Denis GRANDGIRARD; Stephen L LEIB a Daniel RŮŽEK. Three-dimensional mapping of tick-borne encephalitis virus distribution in the mouse brain using a newly engineered TurboGFP reporter virus. Emerging Microbes and Infections. Taylor and Francis Ltd., 2025, roč. 14, č. 1, s. 2542246-2542263. ISSN 2222-1751. Dostupné z: https://doi.org/10.1080/22221751.2025.2542246.

HOLOUBEK, Jiří; Jiří SALÁT; Jan KOTOUČEK; Tomáš KASTL; Marie VANCOVÁ; Ivana HUVAROVÁ; Petr BEDNÁŘ; Klára BEDNÁŘOVÁ; Daniel RŮŽEK; Daniel RENČIUK a Luděk EYER. Antiviral activity of porphyrins and porphyrin-like compounds against tick-borne encephalitis virus: Blockage of the viral entry/fusion machinery by photosensitization-mediated destruction of the viral envelope. Antiviral Research. Elsevier, 2024, roč. 221, January 2024, s. 1-15. ISSN 0166-3542. Dostupné z: https://doi.org/10.1016/j.antiviral.2023.105767.

NAGY, Gergely armin; Dora TOMBACZ; Istvan PRAZSAK; Zsolt CSABAI; Akos DORMO; Gabor GULYAS; Gabor KEMENESI; Gabor E TOTH; Jiří HOLOUBEK; Daniel RŮŽEK; Balazs KAKUK a Zsolt BOLDOGKOI. Exploring the transcriptomic profile of human monkeypox virus via CAGE and native RNA sequencing approaches. mSphere. Washington, DC, USA: American Society for Microbiology, 2024, roč. 9, č. 9, s. 1-22. ISSN 2379-5042. Dostupné z: https://doi.org/10.1128/msphere.00356-24.

MIKHNOVETS, Igor E.; Jiří HOLOUBEK; Irina S. PANINA; Jan KOTOUČEK; Daniil A. GVOZDEV; Stepan P. CHUMAKOV; Maxim S. KRASILNIKOV; Mikhail Y. ZHITLOV; Evgeny L. GULYAK; Alexey A. CHISTOV; Timofei D. NIKITIN; Vladimir A. KORSHUN; Roman G. EFREMOV; Vera A. ALFEROVA; Daniel RŮŽEK; Luděk EYER a Alexey V. USTINOV. Alkyl Derivatives of Perylene Photosensitizing Antivirals: Towards Understanding the Influence of Lipophilicity. International Journal of Molecular Sciences. MDPI, 2023, roč. 24, č. 22, s. 1-37. ISSN 1661-6596. Dostupné z: https://doi.org/10.3390/ijms242216483.

STRAKOVÁ, Petra; Petr BEDNÁŘ; Jan KOTOUČEK; Jiří HOLOUBEK; Andrea FOŘTOVÁ; Pavel SVOBODA; Michal ŠTEFÁNIK; Ivana HUVAROVÁ; Pavlína ŠIMEČKOVÁ; Josef MAŠEK; Daniil A GVOZDEV; Igor E MIKHNOVETS; Alexey A CHISTOV; Timofei D NIKITIN; Maxim S KRASILNIKOV; Alexey V USTINOV; Vera A ALFEROVA; Vladimir A KORSHUN; Daniel RŮŽEK a Luděk EYER. Antiviral activity of singlet oxygen-photogenerating perylene compounds against SARS-CoV-2: Interaction with the viral envelope and photodynamic virion inactivation. Virus Research. Elsevier, 2023, roč. 334, September, s. 1-21. ISSN 0168-1702. Dostupné z: https://doi.org/10.1016/j.virusres.2023.199158.

KAKUK, Balázs; Ákos DÖRMŐ; Zsolt CSABAI; Gábor KEMENESI; Jiří HOLOUBEK; Daniel RŮŽEK; István PRAZSÁK; Virág Éva DANI; Béla DÉNES; Gábor TORMA; Ferenc JAKAB; Gábor E. TÓTH; Fanni V. FÖLDES; Brigitta ZANA; Zsófia LANSZKI; Ákos HARANGOZÓ; Ádám FÜLÖP; Gábor GULYÁS; Máté MIZIK; András Attila KISS; Dóra TOMBÁCZ a Zsolt BOLDOGKŐI. In-depth Temporal Transcriptome Profiling of Monkeypox and Host Cells using Nanopore Sequencing. Scientific Data. Nature Publishing Group, 2023, roč. 10, č. 262, s. 1-12. ISSN 2052-4463. Dostupné z: https://doi.org/10.1038/s41597-023-02149-4.

HOLOUBEK, Jiří. Tick-borne encephalitis virus: new insights in the virus biology and towards new therapeutic approaches. In Medical Biodefense Conference, Munich, Germany. 2023.

HOLOUBEK, Jiří; Klára BEDNÁŘOVÁ; Jan HAVIERNIK; Ivana HUVAROVÁ; Zuzana DVOŘÁKOVÁ; Jiří ČERNÝ; Martina OUTLÁ; Jiří SALÁT; Eva KONKOLOVÁ; Evzen BOURA; Daniel RŮŽEK; Michaela VORLÍČKOVÁ; Luděk EYER a Daniel RENČIUK. Guanine quadruplexes in the RNA genome of the tick-borne encephalitis virus: a new antiviral target. In The Biomania Student Scientific Meeting - Brno. 2022.

HOLOUBEK, Jiří; Klára BEDNÁŘOVÁ; Jan HAVIERNIK; Ivana HUVAROVÁ; Zuzana DVOŘÁKOVÁ; Jiří ČERNÝ; Martina OUTLÁ; Jiří SALÁT; Eva KONKOLOVA; Evzen BOURA; Daniel RŮŽEK; Michaela VORLÍČKOVÁ; Luděk EYER a Daniel RENČIUK. Guanine quadruplexes in the RNA genome of the tick-borne encephalitis virus: their role as a new antiviral target and in virus biology. Nucleic Acids Research. Oxford University Press, 2022, roč. 50, č. 8, s. 4574-4600. ISSN 0305-1048. Dostupné z: https://doi.org/10.1093/nar/gkac225.

HOLOUBEK, Jiří; M VANCOVÁ; Daniel RŮŽEK a Luděk EYER. Porphyrins as potent inhibitors of the entry process of tick-borne encephalitis virus. In 35th International Conference on Antiviral Research; Seattle, WA, USA. 2022.

HOLOUBEK, Jiří; M VANCOVÁ; Daniel RŮŽEK a Luděk EYER. Porphyrins and metalloporphyrins as potent inhibitors of the entry process of tick-borne encephalitis virus. In Zoonoses 2021 - International Symposium on Zoonoses Research. 2021.