Výpis publikací

VYKLICKÁ, Kateřina; Jiří KUČERA; Vojtěch BARTOŇ; Jan BÖHM; Roman ŘEMÍNEK; Petra KUBASOVÁ; Kateřina PAŠKOVÁ; Zdeněk GLATZ; Jan LOCHMAN; Filip RŮŽIČKA a Petra BOŘILOVÁ LINHARTOVÁ. Effect of carbohydrate substrates on growth and enterotoxin gene expression in Bacillus cereus (pacificus). Nature Scientific Reports. Berlin: NATURE RESEARCH, 2026, roč. 16, č. 1, s. 1-11. ISSN 2045-2322. Dostupné z: https://doi.org/10.1038/s41598-025-31689-5.

MASAŘ, Matěj; Lenka JURASOVÁ; Pavel BOUCHAL; Martin MANDL a Jiří KUČERA. Aerobic ferric iron reduction by sulfur-oxidizing Acidithiobacillus thiooxidans. In XXIV setkání biochemiků a molekulárních biologů. 2025. ISBN 978-80-280-0783-6.

KUČERA, Jiří; Klemens KREMSER; Pavel BOUCHAL; David POTĚŠIL; Tomáš VACULOVIČ; Dalibor VŠIANSKÝ; Georg M. GUEBITZ a Martin MANDL. Proteomic Insights into the Adaptation of Acidithiobacillus ferridurans to Municipal Solid Waste Incineration Residues for Enhanced Bioleaching Efficiency. Journal of Proteome Research. American Chemical Society, 2025, roč. 24, č. 5, s. 2243-2255. ISSN 1535-3893. Dostupné z: https://doi.org/10.1021/acs.jproteome.4c00527.

LALROPUIA, Lalropuia; Jiří KUČERA; Wadih Y RASSY; Eva PAKOSTOVA; Dominik SCHILD; Martin MANDL; Klemens KREMSER a Georg M. GUEBITZ. Metal recovery from spent lithium-ion batteries via two-step bioleaching using adapted chemolithotrophs from an acidic mine pit lake. Frontiers in Microbiology. Frontiers Media SA, 2024, roč. 15, January 2024, s. 1-12. ISSN 1664-302X. Dostupné z: https://doi.org/10.3389/fmicb.2024.1347072.

KUČERA, Jiří; Lenka JURASOVÁ; Pavel BOUCHAL a Martin MANDL. Proteomic Insights into Ferric Iron Reduction in Sulfur-Oxidizing Acidithiobacillus thiooxidans. In Metallurgy and Materials Society of CIM (eds). Proceedings of the 63rd Conference of Metallurgists, COM 2024. Switzerland: Springer Nature, 2024, s. 1073–1077, 1725 s. ISBN 978-3-031-67397-9. Dostupné z: https://doi.org/10.1007/978-3-031-67398-6_179.

MANDL, Martin; Jiří KUČERA a Jitka VECHETOVÁ. Substrate limitation in bioleaching cultures of sulfur-oxidizing bacteria. Online. In Jana Hroncová, Eva Mačingová, Alena Luptáková, Jana Sedláková-Kaduková. Biotechnology and Metals 2024. Košice: Slovak Academy of Sciences, 2024, s. 190 - 191. ISBN 978-80-89883-15-8.

ŽAJDLÍKOVÁ, Veronika; Veronika FARKOVÁ; Jiří KUČERA; Kateřina DADÁKOVÁ; Martina ZAPLETALOVÁ; Kateřina PAŠKOVÁ; Roman ŘEMÍNEK; Zdeněk GLATZ; Lydie IZAKOVIČOVÁ HOLLÁ; Filip RŮŽIČKA; Jan LOCHMAN a Petra BOŘILOVÁ LINHARTOVÁ. Gene expression and metabolic activity of Streptococcus mutans during exposure to dietary carbohydrates glucose, sucrose, lactose, and xylitol. Molecular Oral Microbiology. Hoboken: Wiley, 2023, roč. 38, č. 5, s. 424-441. ISSN 2041-1006. Dostupné z: https://doi.org/10.1111/omi.12428.

MOYA-BELTRÁN, Ana; Martin GAJDOŠÍK; Camila ROJAS-VILLALOBOS; Simón BEARD; Martin MANDL; Danitza SILVA-GARCÍA; D. Barrie JOHNSON; Pablo RAMIREZ; Raquel QUATRINI a Jiří KUČERA. Influence of mobile genetic elements and insertion sequences in long- and short-term adaptive processes of Acidithiobacillus ferrooxidans strains. Scientific Reports. Nature Research, 2023, roč. 13, č. 1, s. 1-16. ISSN 2045-2322. Dostupné z: https://doi.org/10.1038/s41598-023-37341-4.

SPIESS, Sabine; Jiří KUČERA; Tomáš VACULOVIČ; Ludwig BIRKLBAUER; Clemens HABERMAIER; Amaia Sasiain CONDE; Martin MANDL a Marianne HABERBAUER. Zinc recovery from bioleachate using a microbial electrolysis cell and comparison with selective precipitation. Frontiers in Microbiology. Frontiers Research Foundation, 2023, roč. 14, August 2023, s. 1-11. ISSN 1664-302X. Dostupné z: https://doi.org/10.3389/fmicb.2023.1238853.

SPIESS, Sabine; Sasiain Conde AMAIA; Jiří KUČERA; David NOVÁK; Sophie THALLNER; Nina KIEBERGER; Georg M M GUEBITZ a Marianne HABERBAUER. Bioelectrochemical methanation by utilization of steel mill off-gas in a two-chamber microbial electrolysis cell. Frontiers in Bioengineering and Biotechnology. Laussane: Frontiers Media S.A., 2022, roč. 10, September, s. 1-13. ISSN 2296-4185. Dostupné z: https://doi.org/10.3389/fbioe.2022.972653.

KREMSER, Klemens; Herta SCHOEN; Patrick GERL; Jiří KUČERA a Georg M. GUEBITZ. Biogenic sulfuric acid production and application for metal bioleaching from various waste streams. In The 24th International Biohydrometallurgy Symposium, Perth and online 20-23 November 2022. Biotechnology for resource sustainability and circular economy. Book of Abstracts. Edited by: Kaksonen AH, Watkin W, Cheng KY, Boxall NJ, Campbell B, Oppermann L. CSIRO, Australia. 2022.

KREMSER, Klemens; Sophie THALLNER; Sabine SPIESS; Jiří KUČERA; Tomáš VACULOVIČ; Dalibor VŠIANSKÝ; Marianne HABERBAUER a Georg M. GUEBITZ. Bioleaching and Selective Precipitation for Metal Recovery from Basic Oxygen Furnace Slag. Processes. MDPI, 2022, roč. 10, č. 3, s. 1-12. ISSN 2227-9717. Dostupné z: https://doi.org/10.3390/pr10030576.

KUČERA, Jiří; Marek ŠŤAVÍK; Martin GAJDOŠÍK a Martin MANDL. Glutathione-binding proteins in sulfur-oxidizing acidophile Acidithiobacillus ferrooxidans. In The 24th International Biohydrometallurgy Symposium, Perth and online 20-23 November 2022. Biotechnology for resource sustainability and circular economy. Book of Abstracts. Edited by: Kaksonen AH, Watkin W, Cheng KY, Boxall NJ, Campbell B, Oppermann L. CSIRO, Australia. 2022.

MANDL, Martin; Jiří KUČERA; Josef ZEMAN a Jitka VECHETOVÁ. Linear kinetics in Acidithiobacillus ferrooxidans cultures. In The 24th International Biohydrometallurgy Symposium, Perth and online 20-23 November 2022. Biotechnology for resource sustainability and circular economy. Book of Abstracts. Edited by: Kaksonen AH, Watkin W, Cheng KY, Boxall NJ, Campbell B, Oppermann L. CSIRO, Australia. 2022.

KREMSER, Klemens; Melanie MALTSCHNIG; Herta SCHÖN; Aleksander JANDRIC; Martin GAJDOŠÍK; Tomáš VACULOVIČ; Jiří KUČERA a Georg M. GUEBITZ. Optimized biogenic sulfuric acid production and application in the treatment of waste incineration residues. Waste Management. Elsevier, 2022, roč. 144, May, s. 182-190. ISSN 0956-053X. Dostupné z: https://doi.org/10.1016/j.wasman.2022.03.025.

VYKLICKÁ, Kateřina; Jiří KUČERA; Kateřina PAŠKOVÁ; Jana DOKULILOVA; Roman ŘEMÍNEK; Zdeněk GLATZ a Petra BOŘILOVÁ LINHARTOVÁ. Specific carbohydrate substrates affected the growth of Bacillus cereus strain isolated from an environmental sample. In Setkání biochemiků a molekulárních biologů, 2022. 2022.

SPIESS, Sabine; Jiří KUČERA; Hathaichanok SEELAJAROEN; Amaia SASIAIN; Sophie THALLNER; Klemens KREMSER; David NOVÁK; Georg M. GUEBITZ a Marianne HABERBAUER. Impact of Carbon Felt Electrode Pretreatment on Anodic Biofilm Composition in Microbial Electrolysis Cells. Biosensors. MDPI, 2021, roč. 11, č. 6, s. "170", 15 s. ISSN 2079-6374. Dostupné z: https://doi.org/10.3390/bios11060170.

KREMSER, Klemens; Sophie THALLNER; Dorina STRBIK; Sabine SPIESS; Jiří KUČERA; Tomáš VACULOVIČ; Dalibor VŠIANSKÝ; Marianne HABERBAUER; Martin MANDL a Georg M. GUEBITZ. Leachability of metals from waste incineration residues by iron- and sulfur-oxidizing bacteria. Journal of Environmental Management. London: Academic Press Ltd-Elsevier Science Ltd, 2021, roč. 280, February, s. "111734-1"-"111734-8", 8 s. ISSN 0301-4797. Dostupné z: https://doi.org/10.1016/j.jenvman.2020.111734.

KUČERA, Jiří; Jan LOCHMAN; Pavel BOUCHAL; Eva PAKOSTOVA; Kamil MIKULÁŠEK; Sabrina HEDRICH; Oldřich JANICZEK; Martin MANDL a D. Barrie JOHNSON. A Model of Aerobic and Anaerobic Metabolism of Hydrogen in the Extremophile Acidithiobacillus ferrooxidans. Frontiers in Microbiology. Lausanne: Frontiers Media SA, 2020, roč. 11, November 2020, s. 610836-610849. ISSN 1664-302X. Dostupné z: https://doi.org/10.3389/fmicb.2020.610836.

MANDL, Martin a Jiří KUČERA. Acidofilní sirné bakterie v biotechnologii a biogeochemii. Bulletin Československé společnosti mikrobiologické. Praha: ČSSM, 2019, roč. 61, č. 2, s. 46-57. ISSN 0009-0646.

MICENKOVÁ, Lenka; Juraj BOSÁK; Jiří KUČERA; Matěj HRALA; Tereza DOLEJSOVA; Ondrej ŠEDO; Dirk LINKE; Radovan FISER a David ŠMAJS. Colicin Z, a structurally and functionally novel colicin type that selectively kills enteroinvasive Escherichia coli and Shigella strains. Scientific reports. LONDON: NATURE PUBLISHING GROUP, 2019, roč. 9, JUL 31 2019, s. 1-12. ISSN 2045-2322. Dostupné z: https://doi.org/10.1038/s41598-019-47488-8.

KUČERA, Jiří; Pavel BOUCHAL; Oldřich JANICZEK a Martin MANDL. Proteomic response to hydrogen peroxide-induced oxidative stress in pyrite-grown Acidithiobacillus ferrooxidans. In 23rd International Biohydrometallurgy Symposium. 2019.

MANDL, Martin; Eva PAKOSTOVÁ; Simona SIDOROVÁ a Jiří KUČERA. Total organic carbon and biomass determination of bioleaching bacteria. In XX. setkání biochemiků a molekulárních biologů. 2019. ISBN 978-80-210-9420-8.

MANDL, Martin; Eva PAKOSTOVÁ; Simona SIDOROVÁ a Jiří KUČERA. Total organic carbon measurements and biomass quantification of bioleaching bacteria. In 23rd International Biohydrometallurgy Symposium. 2019.

GAJDOŠÍK, Martin; Jiří KUČERA; Jan LOCHMAN; Oldřich JANICZEK a Martin MANDL. A flexible genome of the extreme acidophile Acidithiobacillus ferrooxidans. In XIX. setkání biochemiků a molekulárních biologů. 2018.

BOŘILOVÁ, Šárka; Martin MANDL; Josef ZEMAN; Jiří KUČERA; Eva PAKOSTOVÁ; Oldřich JANICZEK a OH TUOVINEN. Can Sulfate Be the First Dominant Aqueous Sulfur Species Formed in the Oxidation of Pyrite by Acidithiobacillus ferrooxidans? Frontiers in Microbiology. Lausanne: Frontiers Media SA, 2018, roč. 9, December, s. 3134-3146. ISSN 1664-302X. Dostupné z: https://doi.org/10.3389/fmicb.2018.03134.

ZAPLETALOVÁ, Martina; Kateřina PAŠKOVÁ; Jiří KUČERA; Jan LOCHMAN a Petra BOŘILOVÁ LINHARTOVÁ. Carbohydrate source effects on the transcriptome of Streptococcus mutans. In FEBS OPEN BIO. 2018. ISSN 2211-5463.

PAŠKOVÁ, Kateřina; Katarína NOVOTNÁ; Jiří KUČERA; Jan LOCHMAN; Martina ZAPLETALOVÁ; Lydie IZAKOVIČOVÁ HOLLÁ a Petra BOŘILOVÁ LINHARTOVÁ. Komparativní studie vlivu vybraných rostlinných extraktů na růst bakterie Streptococcus mutans. In Studentská vědecká konference lékařských fakult České a Slovenské republiky 2018. 2018. ISBN 978-80-87878-34-7.

PAŠKOVÁ, Kateřina; Katarína NOVOTNÁ; Jiří KUČERA; Jan LOCHMAN; Martina ZAPLETALOVÁ; Lydie IZAKOVIČOVÁ HOLLÁ a Petra BOŘILOVÁ LINHARTOVÁ. Komparativní studie vlivu vybraných rostlinných extraktů na růst bakterie Streptococcus mutans. In 62. Studentská vědecká konference. 2018. ISBN 978-80-210-8959-4.

GAJDOŠÍK, Martin; Jiří KUČERA; Jan LOCHMAN; Oldřich JANICZEK a Martin MANDL. Comparative genome analysis of extremophile Acidithiobacillus ferrooxidans grown on different substrates. In XVIII. Setkání biochemiků a molekulárních biologů. 2017. ISBN 978-80-210-8765-1.

PAŠKOVÁ, Kateřina; Petra BOŘILOVÁ LINHARTOVÁ; Jiří KUČERA; Martina ZAPLETALOVÁ; Jan LOCHMAN a Lydie IZAKOVIČOVÁ HOLLÁ. Expression of virulence genes in Bacillus cereus depending on various carbohydrates. In XVIII. Setkání biochemiků a molekulárních biologů. 2017. ISBN 978-80-210-8765-1.

KUČERA, Jiří; Oldřich JANICZEK; Jan ŠMOLDAS a Martin MANDL. Proteins binding to immobilized rusticyanin detected by affinity chromatography. Online. In Sand W.,Rubberdt K.,Glombitza F.,Sand W.,Veliz M.V.,Willscher S.,Hedrich S.,Schippers A. Solid State Phenomena. 262. vyd. Zurich (Switzerland): Trans Tech Publications Ltd, 2017, s. 344-349. ISBN 978-3-0357-1180-6. Dostupné z: https://doi.org/10.4028/www.scientific.net/SSP.262.344.

PAŠKOVÁ, Kateřina; Petra BOŘILOVÁ LINHARTOVÁ; Jiří KUČERA; Roman ŘEMÍNEK; Martina ZAPLETALOVÁ; Jan LOCHMAN a Lydie IZAKOVIČOVÁ HOLLÁ. Streptococcus mutans and its ability to metabolize various carbohydrates. In The Biomania Student Scientific Meeting 2017, Brno. 2017. ISBN 978-80-210-8737-8.

KUČERA, Jiří; David POTĚŠIL; Oldřich JANICZEK a Martin MANDL. Studium vzájemných interakcí proteinů u extrémně acidofilních bakterií. In XVIII. Setkání biochemiků a molekulárních biologů. 2017. ISBN 978-80-210-8765-1.

KUČERA, Jiří; Pavel BOUCHAL; Oldřich JANICZEK a Martin MANDL. Využití komparativní proteomiky při studiu adaptace chemolitotrofních acidofilních bakterií na změny vnějšího prostředí. In 5. Neformální proteomické setkání. 2017.

KUČERA, Jiří; Eva PAKOSTOVÁ; Oldřich JANICZEK a Martin MANDL. Anaerobní oxidace síry u extremofilních bakterií. 2016. ISSN 2336-7202.

KUČERA, Jiří; Eva PAKOSTOVÁ; Jan LOCHMAN; Oldřich JANICZEK a Martin MANDL. Are there multiple mechanisms of anaerobic sulfur oxidation with ferric iron in Acidithiobacillus ferrooxidans? Research in Microbiology. Amsterdam: Elsevier, 2016, roč. 167, č. 5, s. 357-366. ISSN 0923-2508. Dostupné z: https://doi.org/10.1016/j.resmic.2016.02.004.

KUČERA, Jiří; Ondrej ŠEDO; David POTĚŠIL; Oldřich JANICZEK; Zbyněk ZDRÁHAL a Martin MANDL. Comparative proteomic analysis of sulfur-oxidizing Acidithiobacillus ferrooxidans CCM 4253 cultures having lost the ability to couple anaerobic elemental sulfur oxidation with ferric iron reduction. Research in Microbiology. Amsterdam: Elsevier Science, 2016, roč. 167, č. 7, s. 587-594. ISSN 0923-2508. Dostupné z: https://doi.org/10.1016/j.resmic.2016.06.009.

KUČERA, Jiří; Eva PAKOSTOVÁ; Oldřich JANICZEK a Martin MANDL. Mechanismus anaerobní oxidace síry acidofilními bakteriemi. In 27. Kongres Československé společnosti mikrobiologické. 2016. ISBN 978-80-270-0136-1.

KUČERA, Jiří; Eva PAKOSTOVÁ; Oldřich JANICZEK a Martin MANDL. Changes in Acidithiobacillus ferrooxidans ability to reduce ferric iron by elemental sulfur. Online. In M. Zaki Mubarok, Siti Khodijah Chaerun, Wahyudin Prawira Minwal, Fadhli Muhammad and Killang Pratama. Biotechnologies in Mining Industry and Environmental Engineering. Adv Mater Res Vol. 1130. Switzerland: Trans Tech Publications, 2015, s. 97-100. ISSN 1662-8985. Dostupné z: https://doi.org/10.4028/www.scientific.net/AMR.1130.97.

KUČERA, Jiří; Eva PAKOSTOVÁ; Oldřich JANICZEK a Martin MANDL. A model of anaerobic dissimilatory iron reduction in the biomining extremophile. In BioTech 2014 and 6th Czech-Swiss Symposium. 2014. ISBN 978-80-7080-887-0.

KUČERA, Jiří; Eva PAKOSTOVÁ; Oldřich JANICZEK a Martin MANDL. Gene regulation during ferric iron reduction coupled to sulfur metabolism in biomining bacteria. In XVI. Setkání biochemiků a molekulárních biologů. 2014. ISBN 978-80-210-7340-1.

KUČERA, Jiří; Pavel BOUCHAL; Jan LOCHMAN; David POTĚŠIL; Oldřich JANICZEK; Zbyněk ZDRÁHAL a Martin MANDL. Ferrous iron oxidation by sulfur-oxidizing Acidithiobacillus ferrooxidans and analysis of the process at the levels of transcription and protein synthesis. Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology. Dordrecht: Springer, 2013, roč. 103, č. 4, s. 905-919. ISSN 0003-6072. Dostupné z: https://doi.org/10.1007/s10482-012-9872-2.

KUČERA, Jiří; Jan LOCHMAN; Oldřich JANICZEK a Martin MANDL. Gene regulation during adaptation of a sulfur-oxidizing acidophile to iron oxidation. In 26. kongres Československé společnosti mikrobiologické. 2013. ISBN 978-80-260-4507-6.

KUČERA, Jiří; Pavel BOUCHAL; Hana ČERNÁ; David POTĚŠIL; Oldřich JANICZEK; Zbyněk ZDRÁHAL a Martin MANDL. Kinetics of anaerobic elemental sulfur oxidation by ferric iron in Acidithiobacillus ferrooxidans and protein identification by comparative 2-DE-MS/MS. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY. DORDRECHT (NETHERLANDS): Springer, 2012, roč. 101, č. 3, s. 561-573. ISSN 0003-6072. Dostupné z: https://doi.org/10.1007/s10482-011-9670-2.

KUČERA, Jiří; Josef ZEMAN a Martin MANDL. Reaction modelling of anaerobic elemental sulfur oxidation in biomining bacteria. In XIII. biochemický sjezd ČSBMB. 2012. ISBN 978-80-86313-34-4.

KUČERA, Jiří; Josef ZEMAN; Martin MANDL a Hana ČERNÁ. Stoichiometry of bacterial anaerobic oxidation of elemental sulfur by ferric iron. Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology. Dordrecht (Netherlands): Springer, 2012, roč. 101, č. 4, s. 919-922. ISSN 0003-6072. Dostupné z: https://doi.org/10.1007/s10482-012-9699-x.

KUČERA, Jiří; Pavel BOUCHAL; Oldřich JANICZEK a Martin MANDL. Anaerobic ferric iron reduction by acidophilic biomining bacteria. In Biotech 2011 and 5th Czech-Swiss Symposium. 2011. ISBN 978-80-7080-782-8.

KUČERA, Jiří; Pavel BOUCHAL; Oldřich JANICZEK a Martin MANDL. Anaerobic oxidation of elemental sulfur in the chemolithoautotrophic bacterium Acidithiobacillus ferrooxidans. 2011. ISBN 978-80-210-5594-0.

MANDL, Martin; Jiří KUČERA; Pavel BOUCHAL a Oldřich JANICZEK. Biodegradation of iron sulfides by acidophilic bacteria and effects of released iron on the environment. In XIII International Congress of Bacteriology and Applied Microbiology. 2011.

KUČERA, Jiří; Martin MANDL; Oldřich JANICZEK a Pavel BOUCHAL. Metabolic changes in sulfur- and iron-oxidizing Acidithiobacillus ferrooxidans. In XIV. Setkání biochemiků a molekulárních biologů. 2010. ISBN 978-80-210-5164-5.

MANDL, Martin; Eva PAKOSTOVÁ; Jiří KUČERA; Iva BARTÁKOVÁ; Pavel BOUCHAL a Oldřich JANICZEK. Mobilization and phytotoxicity of iron under conditions of bacterial oxidation of iron sulfides. In Biometals 2010. 2010.