Filter publications
-
MUCINA, Ladislav, Klaus MUMMENHOFF, Pieter WINTER, van Niekerk ADRIAAN, Terezie MALÍK MANDÁKOVÁ and Martin LYSÁK. Drought and life-history strategies in Heliophila (Brassicaceae). New Phytologist. HOBOKEN: Blackwell Science, 2024, vol. 241, No 2, p. 532-534. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.19352.URL
RIV: Article in a journal. English. United States of America.
Mucina, Ladislav (guarantor) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution)
Keywords in English: Brassicaceae; Classification & Regression Tree; climatic seasonality; drought regime; Heliophila; life history; phylogenetic tree; Random Forests
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 5/3/2024 12:38. -
JEDLIČKOVÁ, Veronika, Marie ŠTEFKOVÁ, Terezie MALÍK MANDÁKOVÁ, Juan Francisco SANCHEZ LOPEZ, Marek SEDLÁČEK, Martin LYSÁK and Helene ROBERT BOISIVON. Injection-based hairy root induction and plant regeneration techniques in Brassicaceae. PLANT METHODS. LONDON: BIOMED CENTRAL LTD, 2024, vol. 20, No 1, p. 12, 1-12. ISSN 1746-4811. Available from: https://dx.doi.org/10.1186/s13007-024-01150-1.access to full text
English. United States of America.
Keywords in English: Hairy root, crucifers, Brassicaceae, Asperuginoides axillaris, Arabidopsis thaliana, Cardamine hirsuta, transformation, plant regeneration, cytogenetics
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 30/3/2024 09:51. -
HAY, Nikolai M, Michael D WINDHAM, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Kasper P. HENDRIKS, Klaus MUMMENHOFF, Frederic LENS, Kathleen M. PRYER and C. Donovan BAILEY. A Hyb-Seq phylogeny of Boechera and related genera using a combination of Angiosperms353 and Brassicaceae-specific bait sets. American Journal of Botany. 1537-2197: Wiley, 2023, vol. 110, No 10, p. 1-20. ISSN 0002-9122. Available from: https://dx.doi.org/10.1002/ajb2.16226.URL
RIV/00216224:14740/23:00133319 Article in a journal. English. United States of America.
Hay, Nikolai M (guarantor) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution)
Keywords in English: angiosperms; Boechera; Boechereae; Brassicaceae; Hyb-Seq; phylogenomics; supermatrix
International impact: yes
Reviewed: yes
Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 6/3/2024 17:22. -
GERMAN, Dmitry A, Kasper P HENDRIKS, Marcus A KOCH, Frederic LENS, Martin LYSÁK, C Donovan BAILEY, Klaus MUMMENHOFF and Ihsan A AL-SHEHBAZ. An updated classification of the Brassicaceae (Cruciferae). PHYTOKEYS. SOFIA: PENSOFT PUBL, 2023, vol. 2023, No 220, p. 127-144. ISSN 1314-2011. Available from: https://dx.doi.org/10.3897/phytokeys.220.97724.URL
RIV/00216224:14740/23:00134397 Article in a journal. English. Bulgaria.
Lysák, Martin (203 Czech Republic, belonging to the institution) -- Al-Shehbaz, Ihsan A (guarantor)
Keywords in English: classification; subfamily; supertribe; taxonomy; tribe
International impact: yes
Reviewed: yes
Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 6/3/2024 17:02. -
MABRY, Makenzie E, R Shawn ABRAHAMS, Ihsan A AL-SHEHBAZ, William J BAKER, Simon BARAK, Michael S BARKER, Russell L BARRETT, Aleksandra BERIC, Samik BHATTACHARYA, Sarah B CAREY, Gavin C CONANT, John G CONRAN, Maheshi DASSANAYAKE, Patrick P EDGER, Jocelyn C HALL, Yue HAO, Kasper P HENDRIKS, Julian M HIBBERD, Graham J KING, Daniel J KLIEBENSTEIN, Marcus A KOCH, Ilia J LEITCH, Frederic LENS, Martin LYSÁK, Alex C MCALVAY, Michael T W MCKIBBEN, Francesco MERCATI, Richard C MOORE, Klaus MUMMENHOFF, Daniel J MURPHY, Lachezar A NIKOLOV, Michael PISIAS, Eric H ROALSON, M Eric SCHRANZ, Shawn K THOMAS, Qingyi YU, Alan YOCCA, J Chris PIRES and Alex E HARKESS. Complementing model species with model clades. Plant Cell. Oxford University Press, 2023, vol. 2023, Jan, p. 1-22. ISSN 1040-4651. Available from: https://dx.doi.org/10.1093/plcell/koad260.URL
RIV/00216224:14740/23:00133734 Article in a journal. English. United States of America.
Lysák, Martin (203 Czech Republic, belonging to the institution) -- Harkess, Alex E (guarantor)
Keywords in English: GLUCOSINOLATE-PRODUCING PLANTS; WHOLE-GENOME DUPLICATION; GENE BALANCE HYPOTHESIS; SELF-INCOMPATIBILITY; ARABIDOPSIS-THALIANA; C-4 PHOTOSYNTHESIS; C-3-C-4 INTERMEDIATE; BIOCHEMICAL-CHARACTERIZATION; THELLUNGIELLA-HALOPHILA; DOMINANCE RELATIONSHIPS
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 27/3/2024 08:03. -
WLODZIMIERZ, Piotr, Fernando A RABANAL, Robin BURNS, Matthew NAISH, Elias PRIMETIS, Alison SCOTT, Terezie MALÍK MANDÁKOVÁ, Nicola GORRINGE, Andrew J TOCK, Daniel HOLLAND, Katrin FRITSCHI, Anette HABRING, Christa LANZ, Christie PATEL, Theresa SCHLEGEL, Maximilian COLLENBERG, Miriam MIELKE, Magnus NORDBORG, Fabrice ROUX, Gautam SHIRSEKAR, Carlos ALONSO-BLANCO, Martin LYSÁK, Polina Y NOVIKOVA, Alexandros BOUSIOS, Detlef WEIGEL and Ian R HENDERSON. Cycles of satellite and transposon evolution in <i>Arabidopsis</i> centromeres. Nature. BERLIN: NATURE PORTFOLIO, 2023, vol. 618, No 7965, p. 1-34. ISSN 0028-0836. Available from: https://dx.doi.org/10.1038/s41586-023-06062-z.URL
RIV/00216224:14740/23:00134414 Article in a journal. English. Germany.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution) -- Henderson, Ian R (guarantor)
Keywords in English: CONCERTED EVOLUTION; SELF-INCOMPATIBILITY; SEQUENCE; DNA THALIANALYRATA; HOMOGENIZATION; RECOMBINATION; ANNOTATION; ALIGNMENT
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 5/4/2024 10:32. -
HENDRIKS, Kasper P, Christiane KIEFER, Ihsan A AL-SHEHBAZ, C Donovan BAILEY, van Huysduynen Alex HOOFT, Lachezar A NIKOLOV, Lars NAUHEIMER, Alexandre R ZUNTINI, Dmitry A GERMAN, Andreas FRANZKE, Marcus A KOCH, Martin LYSÁK, Oscar TORO-NUNEZ, Baris OZUDOGRU, Vanessa R INVERNON, Nora WALDEN, Olivier MAURIN, Nikolai M HAY, Philip SHUSHKOV, Terezie MALÍK MANDÁKOVÁ, M Eric SCHRANZ, Mats THULIN, Michael D WINDHAM, Ivana RESETNIK, Stanislav SPANIEL, Elfy LY, J Chris PIRES, Alex HARKESS, Barbara NEUFFER, Robert VOGT, Christian BRAUCHLER, Heimo RAINER, Steven B JANSSENS, Michaela SCHMULL, Alan FORREST, Alessia GUGGISBERG, Sue ZMARZTY, Brendan J LEPSCHI, Neville SCARLETT, Fred W STAUFFER, Ines SCHONBERGER, Peter HEENAN, William J BAKER, Felix FOREST, Klaus MUMMENHOFF and Frederic LENS. Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset. Current Biology. CAMBRIDGE: CELL PRESS, 2023, vol. 33, No 19, p. 4052-4075. ISSN 0960-9822. Available from: https://dx.doi.org/10.1016/j.cub.2023.08.026.URL
RIV/00216224:14740/23:00134399 Article in a journal. English. United States of America.
Lysák, Martin (203 Czech Republic, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Mummenhoff, Klaus (guarantor)
Keywords in English: MULTIPLE SEQUENCE ALIGNMENT; MOLECULAR SYSTEMATICS; PENALIZED LIKELIHOOD; EVOLUTION; DIVERSIFICATION; BIOGEOGRAPHY; ARABIDOPSIS; PLANT DIPLOIDIZATION; TRANSITION
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 4/2/2024 14:28. -
HLAVATÁ, Kristýna, Jana LEONG-ŠKORNIČKOVÁ, Eliška ZÁVESKÁ, Otakar ŠÍDA, Mark NEWMAN, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Karol MARHOLD and Tomáš FÉR. Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods. Molecular Phylogenetics and Evolution. Elsevier, 2023, vol. 178, January, p. 1-14. ISSN 1055-7903. Available from: https://dx.doi.org/10.1016/j.ympev.2022.107666.URL
RIV/00216224:14740/23:00132764 Article in a journal. English. United States of America.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution) -- Fér, Tomáš (guarantor)
Keywords in English: Chromosome counts; cpDNA; Elettariopsis; Hyb-Seq; ITS; Polyploidy
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 5/4/2024 21:11. -
SHEN, Fei, Shixiao XU, Shen QI, Changwei BI and Martin LYSÁK. The allotetraploid horseradish genome provides insights into subgenome diversification and formation of critical traits. Nature Communications. Berlin: Nature Research, 2023, vol. 14, No 1, p. 1-19. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-023-39800-y.URL
RIV/00216224:14740/23:00133216 Article in a journal. English. Germany.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Genome; Genome duplication; Plant evolution; Secondary metabolism
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 7/3/2024 23:56. -
FARHAT, Perla, Terezie MALÍK MANDÁKOVÁ, Jan DIVÍŠEK, Hiroshi KUDOH, Dmitry A. GERMAN and Martin LYSÁK. The evolution of the hypotetraploid Catolobus pendulus genome – the poorly known sister species of Capsella. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2023, vol. 14, May, p. 1-17. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2023.1165140.URL
RIV/00216224:14740/23:00132119 Article in a journal. English. Switzerland.
Farhat, Perla (422 Lebanon, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Divíšek, Jan (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: chromosome painting; Hyb-Seq; Arabidopsis-related model systems; Brassicaceae; Cruciferae; polyploidy; diploidization; whole-genome duplication (WGD)
International impact: yes
Reviewed: yes
Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 6/3/2024 17:30. -
HUANG, Yile, Xinyi GUO, Kang ZHANG, Terezie MALÍK MANDÁKOVÁ, Feng CHENG and Martin LYSÁK. The meso-octoploid Heliophila variabilis genome sheds a new light on the impact of polyploidization and diploidization on the diversity of the Cape flora. Plant Journal. Wiley, 2023, vol. 116, No 2, p. 446-466. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.16383.URL
RIV/00216224:14740/23:00132880 Article in a journal. English. United States of America.
Huang, Yile (156 China, belonging to the institution) -- Guo, Xinyi (156 China, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: genome assembly; octoploidy; polyploidy; whole-genome duplication; genome diploidization; chromosomal rearrangements; adaptive evolution; southern Africa; Brassicaceae
International impact: yes
Reviewed: yes
Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 6/3/2024 17:25. -
HUANG, Yile. The pathways of whole-genome duplications, diploidization, and descending dysploidy in the Biscutelleae (Brassicaceae). In ANANI, Hussein, Terezie MALÍK MANDÁKOVÁ, Xinyi GUO, Manuel PORETTI, Christian PARISOD and Martin LYSÁK. Polyploidy 2023. 2023.
Name (in English): The pathways of whole-genome duplications, diploidization, and descending dysploidy in the Biscutelleae (Brassicaceae)
Changed by: Yile Huang, učo 528854. Changed: 22/5/2023 14:42. -
AGERBIRK, Niels, David I. PATTISON, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Sabine MONTAUT and Dan STAERK. Ancient Biosyntheses in an Oil Crop: Glucosinolate Profiles in Limnanthes alba and Its Relatives (Limnanthaceae, Brassicales). Journal of Agricultural and Food Chemistry. American Chemical Society, 2022, vol. 70, No 4, p. 1134-1147. ISSN 0021-8561. Available from: https://dx.doi.org/10.1021/acs.jafc.1c07299.URL
RIV/00216224:14740/22:00125529 Article in a journal. English. United States of America.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: biosynthesis; evolution; authentic references; spiking; UHPLC; NMR; LC-QToF-MS; QToF MS/MS; mass spectrometry; fragmentation; Limnanthes; Floerkea; Limnanthaceae; Moringaceae; Brassicaceae; crucifers
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 19/12/2022 10:29. -
LYSÁK, Martin. Celebrating Mendel, McClintock, and Darlington: On end-to-end chromosome fusions and nested chromosome fusions. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2022, vol. 34, No 7, p. 2475-2491. ISSN 1040-4651. Available from: https://dx.doi.org/10.1093/plcell/koac116.URL
RIV/00216224:14740/22:00129410 Article in a journal. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: GENOME PROVIDES INSIGHTSDICENTRIC CHROMOSOMESARABIDOPSIS-THALIANAKARYOTYPE EVOLUTIONNUMBER REDUCTIONCENTROMEREORIGINSIZEDIPLOIDIZATIONRECOMBINATION
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 31/1/2023 15:15. -
MAU, Martin, Terezie MALÍK MANDÁKOVÁ, Xingliang MA, Jana EBERSBACH, Lifang ZOU, Martin LYSÁK and Timothy F SHARBEL. Evolution of an Apomixis-Specific Allele Class in Supernumerary Chromatin of Apomictic Boechera. Frontiers in Plant Science. Lausanne: FRONTIERS MEDIA SA, 2022, vol. 13, JUN, p. 890038-890054. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.890038.URL
RIV/00216224:14740/22:00129385 Article in a journal. English. Switzerland.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: apomixis; pollen; UPGRADE2; tapetum; heterochromatic chromosome; gene evolution; Boechera; supernumerary DNA
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 20/1/2023 14:07. -
OLSEN, Luka N, Marie K BRANDRUD, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Charlotte S BJORA, Eduardo CIRES, Inger NORDAL and Anne K BRYSTING. Genetic structure and evolution of diploid Cochlearia in Iceland. Botanical Journal of the Linnean society. OXFORD: The Linnean Society of London, 2022, vol. 200, No 3, p. 395-415. ISSN 0024-4074. Available from: https://dx.doi.org/10.1093/botlinnean/boac018.URL
RIV/00216224:14740/22:00127897 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: alpine; Brassicaceae; chromosome counts; coastal plant; dysploidy; morphology; RADseq
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 11/1/2023 16:49. -
ZUO, Sheng, Xinyi GUO, Terezie MALÍK MANDÁKOVÁ, Mark EDGINTON, Ihsan A AL-SHEHBAZ and Martin LYSÁK. Genome diploidization associates with cladogenesis, trait disparity, and plastid gene evolution. PLANT PHYSIOLOGY. UNITED STATES: OXFORD UNIV PRESS INC, 2022, vol. 190, No 1, p. 403-420. ISSN 0032-0889. Available from: https://dx.doi.org/10.1093/plphys/kiac268.URL
RIV/00216224:14740/22:00126244 Article in a journal. English. United States of America.
Zuo, Sheng (156 China, belonging to the institution) -- Guo, Xinyi (156 China, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicaceae; chloroplast; chloroplast gene; cladistics; cladogenesis; coevolution; cold stress; DNA sequence; fruit; homoeologous recombination; human; molecular evolution; natural selection; nonhuman
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 10/2/2023 13:34. -
ZUO, Sheng, Terezie MALÍK MANDÁKOVÁ, Michaela KUBOVÁ and Martin LYSÁK. Genomes, repeatomes and interphase chromosome organization in the meadowfoam family (Limnanthaceae, Brassicales). PLANT JOURNAL. ENGLAND: WILEY, 2022, vol. 110, No 5, p. 1462-1475. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15750.URL
Name (in English): Genomes, repeatomes and interphase chromosome organization in the meadowfoam family (Limnanthaceae, Brassicales)
RIV/00216224:14740/22:00125618 Article in a journal. English. United States of America.
Zuo, Sheng (156 China, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Kubová, Michaela (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicales chromosomes DNA repeats interphase Limnanthes meadowfoam Rabl repeatome
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 10/2/2023 13:46. -
AL-SHEHBAZ, Ihsan A, Terezie MALÍK MANDÁKOVÁ, Klaus MUMMENHOFF and Martin LYSÁK. Heliophila verna (Brassicaceae), a new species from the Northern Cape of South Africa. Phytotaxa. ST LUKES, NEW ZEALAND: MAGNOLIA PRESS, 2022, vol. 555, No 2, p. 195-199. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.555.2.8.URL
RIV/00216224:14740/22:00128586 Article in a journal. English. New Zealand.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicaceae; Cruciferae; cytogenomics; Heliophila; South Africa
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 10/2/2023 13:47. -
BROCK, Jordan R., Terezie MALÍK MANDÁKOVÁ, Michael MCKAIN, Martin LYSÁK and Kenneth M. OLSEN. Chloroplast phylogenomics in Camelina (Brassicaceae) reveals multiple origins of polyploid species and the maternal lineage of C. sativa. Horticulture Research. Oxford University Press, 2022, vol. 9, January, p. 1-13. ISSN 2662-6810. Available from: https://dx.doi.org/10.1093/hr/uhab050.URL
RIV/00216224:14740/22:00125530 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicaceae; Camelina; Chloroplast Genomics; Divergence Time; Hybridization; Phylogenetics; Polyploidy
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 19/8/2022 13:51. -
DOGAN, Mert, Terezie MALÍK MANDÁKOVÁ, Xinyi GUO and Martin LYSÁK. Idahoa and Subularia: Hidden polyploid origins of two enigmatic genera of crucifers. American Journal of Botany. St Louis: Botanical Soc Amer Inc, 2022, vol. 109, No 8, p. 1273-1289. ISSN 0002-9122. Available from: https://dx.doi.org/10.1002/ajb2.16042.URL
RIV/00216224:14740/22:00127509 Article in a journal. English. United States of America.
Dogan, Mert (792 Turkey, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Guo, Xinyi (156 China, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicaceae; CES clade; Cruciferae; Hyb-Seq; Lineage V; mesopolyploidy; plastome phylogeny; repeatome; Subularieae; whole-genome duplication
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 10/2/2023 13:49. -
RANDALL, Ricardo S, Claire JOURDAIN, Anna NOWICKA, Kateina KADUCHOVA, Michaela KUBOVÁ, Mohammad A AYOUB, Veit SCHUBERT, Christophe TATOUT, Isabelle COLAS, K. KALYANIKRISHNA, Sophie DESSET, Sarah MERMET, Aurelia BOULAFLOUS-STEVENS, Ivona KUBALOVA, Terezie MALÍK MANDÁKOVÁ, Stefan HECKMANN, Martin LYSÁK, Martina PANATTA, Raffaella SANTORO, Daniel SCHUBERT, Ales PECINKA, Devin ROUTH and Celia BAROUX. Image analysis workflows to reveal the spatial organization of cell nuclei and chromosomes. Nucleus. 2022, vol. 13, No 1, p. 277-299. ISSN 1949-1034. Available from: https://dx.doi.org/10.1080/19491034.2022.2144013.URL
RIV/00216224:14740/22:00128557 Article in a journal. English. United States of America.
Kubová, Michaela (203 Czech Republic, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Nucleus; chromatin; 3D organization; spatial distribution; image analysis; segmentation; quantification; mitosis; meiosis; chromosome; metaphase; pachytene; crossovers; nuclear speckles; nuclear bodies
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 10/2/2023 13:50. -
BARTHA, Laszlo, Terezie MALÍK MANDÁKOVÁ, Ales KOVARIK, Paul-Adrian BULZU, Nathalie RODDE, Vaclav MAHELKA, Martin LYSÁK, Margaux-Alison FUSTIER, Jan SAFAR, Petr CAPAL, Lujza KERESZTES and Horia L BANCIU. Intact ribosomal DNA arrays of Potentilla origin detected in Erythronium nucleus suggest recent eudicot-to-monocot horizontal transfer. New Phytologist. Blackwell Science, 2022, vol. 235, No 3, p. 1246-1259. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.18171.URL
RIV/00216224:14740/22:00128173 Article in a journal. English. United States of America.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Erythronium; horizontal gene transfer; internal transcribed spacer; lateral gene transfer; Potentilla; rDNA; ribosomal RNA genes
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 20/1/2023 13:44. -
ZUO, Sheng, Ramakrishna YADALA, Fen YANG, Paul TALBERT, Joerg FUCHS, Veit SCHUBERT, Ulkar AHMADLI, Twan RUTTEN, Ales PECINKA, Martin LYSÁK and Inna LERMONTOVA. Recurrent Plant-Specific Duplications of KNL2 and its Conserved Function as a Kinetochore Assembly Factor. Molecular Biology and Evolution. OXFORD: OXFORD UNIV PRESS, 2022, vol. 39, No 6, p. nestrankovano, 18 pp. ISSN 0737-4038. Available from: https://dx.doi.org/10.1093/molbev/msac123.URL
RIV/00216224:14740/22:00126245 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Zuo, Sheng (156 China, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Lermontova, Inna (276 Germany, belonging to the institution)
Keywords in English: adaptive evolution; CENH3; centromere; endopolyploidy; gene duplication; kinetochore; KNL2
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 10/2/2023 13:51. -
HUANG, Yile. Structure and evolution of the meso-octoploid genome of Heliophila variabilis (Brassicaceae). In MALÍK MANDÁKOVÁ, Terezie, Xinyi GUO and Martin LYSÁK. Congress of the European Society for Evolutionary Biology. 2022.
Name (in English): Structure and evolution of the meso-octoploid genome of Heliophila variabilis (Brassicaceae)
English. Czech Republic.
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Yile Huang, učo 528854. Changed: 3/1/2023 14:20. -
RU, Yalu, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK and Marcus A KOCH. The evolutionary history of Cardamine bulbifera shows a successful rapid postglacial Eurasian range expansion in the absence of sexual reproduction. Annals of Botany. Oxford: Oxford University Press, 2022, vol. 130, No 2, p. 245-263. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcac088.URL
RIV/00216224:14740/22:00128585 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Cardamine bulbifera; clonal reproduction; chromosome painting; demographic history; evolutionary history; ecological modelling; genomics; polyploidy; postglacial expansion; reproductive shift
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 3/4/2023 13:28. -
MALÍK MANDÁKOVÁ, Terezie and Martin LYSÁK. The identification of the missing maternal genome of the allohexaploid camelina (Camelina sativa). Plant Journal. Hoboken (USA): Wiley-Blackwell, 2022, vol. 112, No 3, p. 622-629. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15931.URL
RIV/00216224:14740/22:00129248 Article in a journal. English. United States of America.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: allopolyploidy; Brassicaceae; Camelina; false flax; chromosome rearrangements; genome evolution; hybridization
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 13/12/2022 09:49. -
LYSÁK, Martin, Mark EDGINTON, Sheng ZUO, Xinyi GUO, Terezie MALÍK MANDÁKOVÁ and Ihsan A AL-SHEHBAZ. Transfer of two Arabidella and two Cuphonotus species to the genus Lemphoria (Brassicaceae) and a description of the new species L. queenslandica. Phytotaxa. ST LUKES, NEW ZEALAND: MAGNOLIA PRESS, 2022, vol. 549, No 2, p. 235-240. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.549.2.9.URL
RIV/00216224:14740/22:00129416 Article in a journal. English. New Zealand.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Zuo, Sheng (156 China, belonging to the institution) -- Guo, Xinyi (156 China, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution)
Keywords in English: Arabidella; Australia; Brassicaceae; Cuphonotus; Lemphoria; New Zealand
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 10/2/2023 13:52. -
ŠLENKER, Marek, Adam KANTOR, Karol MARHOLD, Roswitha SCHMICKL, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Marián PERNÝ, Michaela CABOŇOVÁ, Marek SLOVÁK and Judita ZOZOMOVÁ-LIHOVÁ. Allele Sorting as a Novel Approach to Resolving the Origin of Allotetraploids Using Hyb-Seq Data: A Case Study of the Balkan Mountain Endemic Cardamine barbaraeoides. Frontiers in Plant Science. Lausanne: Frontiers Media SA, 2021, vol. 12, April, p. "659275", 22 pp. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2021.659275.URL
RIV/00216224:14740/21:00119685 Article in a journal. English. Switzerland.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: allopolyploidy; Balkan endemism; genomic in situ hybridization; Hyb-Seq; nrDNA; Pindhos Mts; read-backed phasing; target enrichment
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 15/3/2022 18:33. -
DOGAN, Mert, Milan POUCH, Terezie MANDÁKOVÁ, Petra HLOUŠKOVÁ, Xinyi GUO, P. WINTER, Z. CHUMOVA, A. VAN NIEKERK, K. MUMMENHOFF, I.A. AL-SHEHBAZ, L. MUCINA and Martin LYSÁK. Evolution of Tandem Repeats Is Mirroring Post-polyploid Cladogenesis in Heliophila (Brassicaceae). Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2021, vol. 11, JAN, p. 607893-607910. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2020.607893.URL
RIV/00216224:14740/21:00118891 Article in a journal. English. Switzerland.
Dogan, Mert (792 Turkey, belonging to the institution) -- Pouch, Milan (203 Czech Republic, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Hloušková, Petra (203 Czech Republic, belonging to the institution) -- Guo, Xinyi (156 China, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: repetitive DNA; repeatome; whole-genome duplication (WGD); rDNA ITS; plastome phylogeny; Cruciferae; Cape flora; South Africa
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 7/2/2022 12:38. -
HU, Q.J., Y.Z. MA, Terezie MALÍK MANDÁKOVÁ, S. SHI, C.L. CHEN, P.C. SUN, L. ZHANG, L.D. FENG, Y.D. ZHENG, X.Q. FENG, W.J. YANG, J.B. JIANG, T. LI, P.P. ZHOU, Q.S. YU, D.S. WAN, Martin LYSÁK, Z.X. XI, E. NEVO and J.Q. LIU. Genome evolution of the psammophyte Pugionium for desert adaptation and further speciation. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: NATL ACAD SCIENCES, 2021, vol. 118, No 42, p. „e2025711118“, 7 pp. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.2025711118.URL
RIV/00216224:14740/21:00124290 Article in a journal. English. United States of America.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: polyploidization; chromosomal structural variation; microhabitat divergence
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 18/5/2022 13:41. -
MALÍK MANDÁKOVÁ, Terezie, K. ASHBY, B.J. PRICE, M.D. WINDHAM, J.G. CARMAN and Martin LYSÁK. Genome structure and apomixis in Phoenicaulis (Brassicaceae; Boechereae). Journal of Systematics and Evolution. Hoboken: Wiley, 2021, vol. 59, No 1, p. 83-92. ISSN 1674-4918. Available from: https://dx.doi.org/10.1111/jse.12555.URL
RIV/00216224:14740/21:00121303 Article in a journal. English. United States of America.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: apomixis; apospory; autopolyploidy; Boechera; Brassicaceae; karyotype evolution
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 15/3/2022 18:08. -
BAYAT, Soheila, Martin LYSÁK and Terezie MALÍK MANDÁKOVÁ. Genome structure and evolution in the cruciferous tribe Thlaspideae (Brassicaceae). Plant Journal. Hoboken: Wiley-Blackwell, 2021, vol. 108, No 6, p. 1768-1785. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15542.URL
RIV/00216224:14740/21:00119686 Article in a journal. English. United States of America.
Bayat, Soheila (364 Islamic Republic of Iran, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution)
Keywords in English: chromosome rearrangements; garlic mustard; genome evolution; pennycress; pericentric inversions; repetitive DNA; Thlaspideae; Brassicaceae
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 15/3/2022 18:37. -
BURNS, Robin, Terezie MALÍK MANDÁKOVÁ, Joanna GUNIS, Luz Mayela SOTO-JIMÉNEZ, Chang LIU, Martin LYSÁK, Polina Yu. NOVIKOVA and Magnus NORDBORG. Gradual evolution of allopolyploidy in Arabidopsis suecica. Nature Ecology & Evolution. Nature Research, 2021, vol. 5, No 10, p. 1367-1381, 29 pp. ISSN 2397-334X. Available from: https://dx.doi.org/10.1038/s41559-021-01525-w.URL
RIV/00216224:14740/21:00119687 Article in a journal. English. Germany.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution) -- Nordborg, Magnus (guarantor)
Keywords in English: RIBOSOMAL-RNA GENES; NUCLEOLAR DOMINANCE; TRANSPOSABLE ELEMENTS; GENOME ASSEMBLIES; BRASSICA-NAPUS; CD-HIT; POLYPLOIDY; EXPRESSION; COTTON; ELIMINATION
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 5/5/2022 15:21. -
GUO, Xinyi, Terezie MALÍK MANDÁKOVÁ, Karolína TRACHTOVÁ, B. OZUDOGRU, J.Q. LIU and Martin LYSÁK. Linked by Ancestral Bonds: Multiple Whole-Genome Duplications and Reticulate Evolution in a Brassicaceae Tribe. Molecular Biology and Evolution. OXFORD: OXFORD UNIV PRESS, 2021, vol. 38, No 5, p. 1695-1714. ISSN 0737-4038. Available from: https://dx.doi.org/10.1093/molbev/msaa327.URL
RIV/00216224:14740/21:00119671 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Guo, Xinyi (156 China, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Trachtová, Karolína (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: hybridization; polyploidy; whole-genome duplication; reticulate evolution; diploidization; dysploidy; chromosome rearrangements; phylogenetics
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 24/2/2022 16:11. -
SHAN, Wenbo, Michaela KUBOVÁ, Terezie MALÍK MANDÁKOVÁ and Martin LYSÁK. Nuclear organization in crucifer genomes: nucleolus-associated telomere clustering is not a universal interphase configuration in Brassicaceae. Plant Journal. Hoboken: Wiley-Blackwell, 2021, vol. 108, No 2, p. 528-540. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15459.URL
RIV/00216224:14740/21:00119689 Article in a journal. English. United States of America.
Shan, Wenbo (156 China, belonging to the institution) -- Kubová, Michaela (203 Czech Republic, belonging to the institution) -- Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: interphase; chromocenter-loop model; Rabl; centromere; telomere; nucleolus; Arabidopsis thaliana; Crucifereae
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 15/3/2022 18:43. -
HENDRIKS, K.P., Terezie MALÍK MANDÁKOVÁ, N.M. HAY, E. LY, A.H. VAN HUYSDUYNEN, R. TAMRAKAR, S.K. THOMAS, O. TORO-NUNEZ, J.C. PIRES, L.A. NIKOLOV, M.A. KOCH, M.D. WINDHAM, Martin LYSÁK, F. FOREST, K. MUMMENHOFF, W.J. BAKER, F. LENS and C.D. BAILEY. The best of both worlds: Combining lineage-specific and universal bait sets in target-enrichment hybridization reactions. Applications in Plant Sciences. HOBOKEN: Wiley, 2021, vol. 9, No 7, p. „e11438“, 12 pp. ISSN 2168-0450. Available from: https://dx.doi.org/10.1002/aps3.11438.URL
RIV/00216224:14740/21:00119664 Article in a journal. English. United States of America.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicaceae; combining probes; enrichment; Hyb-Seq; phylogenomics; phylogeny; population biology; target enrichment
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 21/2/2022 21:42. -
MAYROSE, I. and Martin LYSÁK. The Evolution of Chromosome Numbers: Mechanistic Models and Experimental Approaches. GENOME BIOLOGY AND EVOLUTION. Oxford University Press, 2021, vol. 13, No 2, p. 1-15. ISSN 1759-6653. Available from: https://dx.doi.org/10.1093/gbe/evaa220.URL
RIV/00216224:14740/21:00121243 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: chromosome numbers; polyploidy; dysploidy; cytogenomics; phylogenetic models; genome evolution
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 18/1/2022 13:59. -
NAISH, M., M. ALONGE, P. WLODZIMIERZ, A.J. TOCK, B.W. ABRAMSON, A. SCHMUCKER, Terezie MALÍK MANDÁKOVÁ, B. JAMGE, C. LAMBING, P. KUO, N. YELINA, N. HARTWICK, K. COLT, L.M. SMITH, J. TON, T. KAKUTANI, R.A. MARTIENSSEN, K. SCHNEEBERGER, Martin LYSÁK, F. BERGER, A. BOUSIOS, T.P. MICHAEL, M.C. SCHATZ and I.R. HENDERSON. The genetic and epigenetic landscape of the Arabidopsis centromeres. Science. WASHINGTON: AMER ASSOC ADVANCEMENT SCIENCE, 2021, vol. 374, No 6569, p. "840"-"+", 88 pp. ISSN 0036-8075. Available from: https://dx.doi.org/10.1126/science.abi7489.URL
RIV/00216224:14740/21:00119657 Article in a journal. English. United States of America.
Malík Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: HUMAN X-CHROMOSOME; TRANSPOSABLE ELEMENTS; SEQUENCE ORGANIZATION; READ ALIGNMENT; WILD-TYPE; GENOME; CHROMATIN; LOCALIZATION; SATELLITE; EVOLUTION
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 21/2/2022 10:39. -
NOWAK, M.D., S. BIRKELAND, Terezie MANDÁKOVÁ, R.R. CHOUDHURY, Xinyi GUO, A.L.S. GUSTAFSSON, A. GIZAW, A. SCHRODER-NIELSEN, M. FRACASSETTI, A.K. BRYSTING, L. RIESEBERG, T. SLOTTE, C. PARISOD, Martin LYSÁK and C. BROCHMANN. The genome of Draba nivalis shows signatures of adaptation to the extreme environmental stresses of the Arctic. Molecular Ecology Resources. HOBOKEN: WILEY, 2021, vol. 21, No 3, p. 661-676. ISSN 1755-098X. Available from: https://dx.doi.org/10.1111/1755-0998.13280.URL
RIV/00216224:14740/21:00118890 Article in a journal. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Guo, Xinyi (156 China, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: adaptation; Arctic; Brassicaceae; chromosome‐ scale assembly; linkage map
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 18/1/2022 13:55. -
YANG, W.J., L. ZHANG, Terezie MANDÁKOVÁ, L. HUANG, T. LI, J.B. JIANG, Y.Z. YANG, Martin LYSÁK, J.Q. LIU and Q.J. HU. The chromosome-level genome sequence and karyotypic evolution of Megadenia pygmaea (Brassicaceae). Molecular Ecology Resources. HOBOKEN: WILEY, 2021, vol. 21, No 3, p. 871-879. ISSN 1755-098X. Available from: https://dx.doi.org/10.1111/1755-0998.13291.URL
RIV/00216224:14740/21:00121242 Article in a journal. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicaceae; descending dysploidy; genome assembly; karyotype and chromosome evolution; Qinghai-Tibet Plateau
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 18/1/2022 13:57. -
MANDÁKOVÁ, Terezie, Petra HLOUŠKOVÁ, M.A. KOCH and Martin LYSÁK. Genome Evolution in Arabideae Was Marked by Frequent Centromere Repositioning. The Plant Cell. American Society of Plant Physiologists, 2020, vol. 32, No 3, p. 650-665. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.19.00557.URL
RIV/00216224:14740/20:00113894 Article in a journal. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Hloušková, Petra (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: acrocentric chromosom; Arabis; chromosomal localization
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 1/3/2021 19:17. -
WALDEN, N., T.P. NGUYEN, Terezie MANDÁKOVÁ, Martin LYSÁK and M.E. SCHRANZ. Genomic Blocks in Aethionema arabicum Support Arabideae as Next Diverging Clade in Brassicaceae. Frontiers in Plant Science. 2020, vol. 11, JUN, p. 719-727. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2020.00719.URL
RIV/00216224:14740/20:00113906 Article in a journal. English. Switzerland.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Aethionema; Brassicaceae; comparative genomics; genomic blocks; synteny; Arabideae
International impact: yes
Reviewed: yes
Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 16/3/2021 10:32. -
MANDÁKOVÁ, Terezie, Petra HLOUŠKOVÁ, M.D. WINDHAM, T. MITCHELL-OLDS, K. ASHBY, B. PRICE, J. CARMAN and Martin LYSÁK. Chromosomal Evolution and Apomixis in the Cruciferous Tribe Boechereae. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2020, vol. 11, MAY, p. 514-530. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2020.00514.URL
RIV/00216224:14740/20:00117309 Article in a journal. English. Switzerland.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Hloušková, Petra (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: apomixis; apospory; autopolyploidy; Cruciferae; descending dysploidy; karyotype evolution; North America; speciation
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 11/3/2021 17:49. -
SHAN, Wenbo, Terezie MANDÁKOVÁ and Martin LYSÁK. Interphase Chromosome Organization in the Brassicaceae. In CEITEC PhD Conference. 2020.URL
RIV/00216224:14740/20:00118411 Conference abstract. English. Czech Republic.
Shan, Wenbo (156 China, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution)
Keywords in English: Brassicaceae
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 17/3/2021 14:52. -
MELICHARKOVA, Andrea, Marek SLENKER, Judita ZOZOMOVA-LIHOVA, Katarina SKOKANOVA, Barbora SINGLIAROVA, Tatiana KACMAROVA, Michaela CABONOVA, Matus KEMPA, GabrielaG SRAMKOVA, Terezie MANDÁKOVÁ, Martin LYSÁK, Marek SVITOK, Lenka MARTONFIOVA and Karol MARHOLD. So Closely Related and Yet So Different: Strong Contrasts Between the Evolutionary Histories of Species of the Cardamine pratensis Polyploid Complex in Central Europe. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2020, vol. 11, December 2020, p. 1-25. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2020.588856.URL
RIV/00216224:14740/20:00114723 Article in a journal. English. Switzerland.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution)
Keywords in English: Brassicaceae; environmental niche; genome size; hybridization; microsatellites; phylogeography; polyploidy; target enrichment
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 9/3/2021 13:31. -
BROCK, J.R., Terezie MANDÁKOVÁ, Martin LYSÁK and I.A. AL-SHEHBAZ. Camelina neglecta (Brassicaceae, Camelineae), a new diploid species from Europe. PHYTOKEYS. SOFIA: PENSOFT PUBL, 2019, JAN, No 115, p. 51-57. ISSN 1314-2011. Available from: https://dx.doi.org/10.3897/phytokeys.115.31704.URL
RIV/00216224:14740/19:00108133 Article in a journal. English. Bulgaria.
Brock, J.R. (840 United States of America) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Al-Shehbaz, I.A. (840 United States of America)
Keywords in English: Brassicaceae; Camelina; Camelineae; chromosome numbers; Cruciferae
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 31/3/2020 21:25. -
FINKE, A., Terezie MANDÁKOVÁ, K. NAWAZ, G.T.H. VU, P. NOVÁK, Jiří MACAS, Martin LYSÁK and A. PECINKA. Genome invasion by a hypomethylated satellite repeat in Australian crucifer Ballantinia antipoda. Plant Journal. Oxford: Blackwell Publishing Ltd, 2019, vol. 99, No 6, p. 1066-1079. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.14380.URL
RIV/00216224:14740/19:00108135 Article in a journal. English. United States of America.
Finke, A. (276 Germany) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Nawaz, K. (276 Germany) -- Vu, G.T.H. (276 Germany) -- Novák, P. (203 Czech Republic) -- Macas, Jiří (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Pecinka, A. (203 Czech Republic)
Keywords in English: satellite repeats; heterochromatin; DNA methylation; comparative genomics; Brassicaceae
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 31/3/2020 21:35. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Healthy Roots and Leaves: Comparative Genome Structure of Horseradish and Watercress. Plant Physiology. ROCKVILLE: American Society of Plant Physiologists, 2019, vol. 179, No 1, p. 66-73. ISSN 0032-0889. Available from: https://dx.doi.org/10.1104/pp.18.01165.URL
RIV/00216224:14740/19:00108134 Article in a journal. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: ARMORACIA-RUSTICANA; BRASSICACEAE; EVOLUTION; DIPLOIDIZATION; HYBRIDIZATION; BLOCKS; VIEW
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 31/3/2020 21:36. -
MANDÁKOVÁ, Terezie, Milan POUCH, J.R. BROCK, I.A. AL-SHEHBAZ and Martin LYSÁK. Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2019, vol. 31, No 11, p. 2596-2612. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.19.00366.URL
RIV/00216224:14740/19:00108120 Article in a journal. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Pouch, Milan (203 Czech Republic, belonging to the institution) -- Brock, J.R. (840 United States of America) -- Al-Shehbaz, I.A. (840 United States of America) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: BRASSICACEAE PHYLOGENY; ARABIDOPSIS-THALIANA; RECENT HYBRIDIZATION; FALSE FLAX; SATIVA; CONSEQUENCES; SEQUENCE; CHROMOTHRIPSIS; POLYPLOIDY; PLANTS
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 31/3/2020 21:47. -
MANDÁKOVÁ, Terezie, Xinyi GUO and Martin LYSÁK. Phylo-cytogenomic Analysis of Genome Duplications in Crucifers. In 1st Annual CEITEC Postdoc Retreat. 2019.
RIV/00216224:14740/19:00113365 Conference abstract. English. Czech Republic.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Guo, Xinyi (156 China, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Phylo-cytogenomic Analysis; Crucifers
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 26/3/2020 21:30. -
HLOUŠKOVÁ, Petra, Terezie MANDÁKOVÁ, Milan POUCH, Pavel TRÁVNÍČEK and Martin LYSÁK. The large genome size variation in the Hesperis clade was shaped by the prevalent proliferation of DNA repeats and rarer genome downsizing. Annals of Botany. Oxford: Oxford University Press, 2019, vol. 124, No 1, p. 103-119. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcz036.URL
RIV/00216224:14740/19:00108137 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Hloušková, Petra (203 Czech Republic, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Pouch, Milan (203 Czech Republic, belonging to the institution) -- Trávníček, Pavel (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Genome size evolution; repetitive DNA; tandem repeats; retrotransposons; interstitial telomeric repeats (ITRs); chromosome organization; Bunias; Hesperis; Matthiola; Lineage III; Brassicaceae
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 31/3/2020 21:58. -
MANDÁKOVÁ, Terezie, J. ZOZOMOVA-LIHOVA, H. KUDOH, Y.P. ZHAO, Martin LYSÁK and K. MARHOLD. The story of promiscuous crucifers: origin and genome evolution of an invasive species, Cardamine occulta (Brassicaceae), and its relatives. Annals of Botany. Oxford: Oxford University Press, 2019, vol. 124, No 2, p. 209-220. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcz019.URL
RIV/00216224:14740/19:00108121 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Zozomova-Lihova, J. (703 Slovakia) -- Kudoh, H. (392 Japan) -- Zhao, Y.P. (156 China) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Marhold, K. (703 Slovakia)
Keywords in English: Allopolyploidy; autopolyploidy; Asian Cardamine; Brassicaceae; centromere repositioning; chromosome rearrangements; comparative chromosome painting; diploidization; genome collinearity
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 31/3/2020 21:59. -
LYSÁK, Martin. Brassicales: an update on chromosomal evolution and ancient polyploidy. Plant Systematics and Evolution. WIEN: Springer, 2018, vol. 304, No 6, p. 757-762. ISSN 0378-2697. Available from: https://dx.doi.org/10.1007/s00606-018-1507-2.URL
RIV/00216224:14740/18:00101423 Article in a journal. English. Austria.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Ancestral genome evolution; Chromosome number evolution; Paleogenomics; Paleopolyploidy; Post-polyploid diversification; Whole-genome duplications
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 13/3/2019 12:55. -
MANDÁKOVÁ, Terezie, Xinyi GUO, B. OZUDOGRU, K. MUMMENHOFF and Martin LYSÁK. Hybridization-facilitated genome merger and repeated chromosome fusion after 8 million years. Plant Journal. Oxford: Blackwell Publishing Ltd, 2018, vol. 96, No 4, p. 748-760. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.14065.URL
RIV/00216224:14740/18:00101418 Article in a journal. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Guo, Xinyi (156 China, belonging to the institution) -- Ozudogru, B. (792 Turkey) -- Mummenhoff, K. (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: karyotype evolution; hybridization; ancient polyploidy; diploidization; chromosomal rearrangements; dysploidy; Ricotia
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 13/3/2019 13:27. -
SHAN, Wenbo, Terezie MANDÁKOVÁ and Martin LYSÁK. Interphase chromosome organization and early meiotic chromosome pairing in Brassicaceae species. In 22nd International Chromosome Conference. 2018.
RIV/00216224:14740/18:00106747 Conference abstract. English. Czech Republic.
Shan, Wenbo (156 China, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: chromosome; meiotic; Brassicaceae
Type of participation: active participation (giving a lecture, organization, etc.)
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 2/4/2019 13:03. -
DOGAN, Mert, Milan POUCH, Petra HLOUŠKOVÁ, Terezie MANDÁKOVÁ and Martin LYSÁK. Phylogenetics and repeatome analysis of the southern African tribe Heliophileae. In 22nd International Chromosome Conference, 2018. 2018.
RIV/00216224:14740/18:00106748 Conference abstract. English. Czech Republic.
Dogan, Mert (792 Turkey, belonging to the institution) -- Pouch, Milan (203 Czech Republic, belonging to the institution) -- Hloušková, Petra (203 Czech Republic, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: phylogenetics; Heliophileae
Type of participation: active participation (giving a lecture, organization, etc.)
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 2/4/2019 13:22. -
BAYAT, Soheila, Shokouh ESMAILBEGI KERMANI, Terezie MANDÁKOVÁ and Martin LYSÁK. Phylogeny and genome evolution in the tribe Thlaspideae (Brassicaceae). In 22nd International Chromosome Conference, 2018. 2018.
RIV/00216224:14740/18:00106749 Conference abstract. English. Czech Republic.
Bayat, Soheila (364 Islamic Republic of Iran, belonging to the institution) -- Esmailbegi Kermani, Shokouh (364 Islamic Republic of Iran, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: phylogeny; Thlaspideae
Type of participation: active participation (giving a lecture, organization, etc.)
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 2/4/2019 13:26. -
ESMAILBEGI KERMANI, Shokouh, I.A. AL-SHEHBAZ, Milan POUCH, Terezie MANDÁKOVÁ, K. MUMMENHOFF, M.R. RAHIMINEJAD, M. MIRTADZADINI and Martin LYSÁK. Phylogeny and systematics of the tribe Thlaspideae (Brassicaceae) and the recognition of two new genera. Taxon. Bratislava: International Assoc. for Plant Taxonomy, 2018, vol. 67, No 2, p. 324-340. ISSN 0040-0262. Available from: https://dx.doi.org/10.12705/672.4.URL
RIV/00216224:14740/18:00101424 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Esmailbegi Kermani, Shokouh (364 Islamic Republic of Iran, belonging to the institution) -- Al-Shehbaz, I.A. (276 Germany) -- Pouch, Milan (203 Czech Republic, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Mummenhoff, K. (276 Germany) -- Rahiminejad, M.R. (364 Islamic Republic of Iran) -- Mirtadzadini, M. (364 Islamic Republic of Iran) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Alliaria; chromosome counts; Cruciferae; Didymophysa; Elburzia; Lysakia; Mummenhoffia; Parlatoria; phylogeny; taxonomy; Thlaspideae
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 13/3/2019 16:38. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Post-polyploid diploidization and diversification through dysploid changes. CURRENT OPINION IN PLANT BIOLOGY. LONDON: CURRENT BIOLOGY LTD, 2018, vol. 42, APR, p. 55-65. ISSN 1369-5266. Available from: https://dx.doi.org/10.1016/j.pbi.2018.03.001.URL
RIV/00216224:14740/18:00101422 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: CHROMOSOME-NUMBER REDUCTION; WHOLE GENOME DUPLICATIONS; ANGIOSPERM DIVERSIFICATION; KARYOTYPE EVOLUTION; SPECIES RADIATION; FLOWERING PLANTS; SEED PLANTS; GENE; SIZE; ORCHIDS
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 13/3/2019 16:38. -
FILIAULT, D.L., ES BALLERINI, Terezie MANDÁKOVÁ, G. AKOZ, N.J. DERIEG, J. SCHMUTZ, J. JENKINS, J. GRIMWOOD, S.Q. SHU, R.D. HAYES, U. HELLSTEN, K. BARRY, J.Y. YAN, S. MIHALTCHEVA, M. KARAFIATOVA, V. NIZHYNSKA, E.M. KRAMER, Martin LYSÁK, S.A. HODGES and M. NORDBORG. The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history. elife. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD, 2018, vol. 7, OCT, p. 36426-36456. ISSN 2050-084X. Available from: https://dx.doi.org/10.7554/eLife.36426.URL
RIV/00216224:14740/18:00101417 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Filiault, D.L. (40 Austria) -- Ballerini, ES (840 United States of America) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Akoz, G. (40 Austria) -- Derieg, N.J. (840 United States of America) -- Schmutz, J. (840 United States of America) -- Jenkins, J. (840 United States of America) -- Grimwood, J. (840 United States of America) -- Shu, S.Q. (840 United States of America) -- Hayes, R.D. (840 United States of America) -- Hellsten, U. (840 United States of America) -- Barry, K. (840 United States of America) -- Yan, J.Y. (840 United States of America) -- Mihaltcheva, S. (840 United States of America) -- Karafiatova, M. (203 Czech Republic) -- Nizhynska, V. (40 Austria) -- Kramer, E.M. (840 United States of America) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Hodges, S.A. (840 United States of America) -- Nordborg, M. (40 Austria)
Keywords in English: DIFFERENTIAL EXPRESSION ANALYSIS; NUCLEAR-DNA AMOUNTS; INBREEDING DEPRESSION; PHYLOGENETIC ANALYSIS; SEX-CHROMOSOME; B CHROMOSOMES; GENE; EVOLUTION; HYBRIDIZATION; DUPLICATIONS
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 13/3/2019 17:07. -
ESMAILBEGI KERMANI, Shokouh, Martin LYSÁK, Mohammad Reza RAHIMINEJAD, Mansour MIRTADZADINI, Klaus MUMMENHOFF and Ihsan A. AL-SHEHBAZ. A taxonomic Revision of the genus Graellsia (Brassicaceae, tribe Thlaspideae). PHYTOTAXA. AUCKLAND: MAGNOLIA PRESS, 2017, vol. 313, No 1, p. 105-116. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.313.1.7.URL
RIV/00216224:14740/17:00098208 Article in a journal. Genetics and molecular biology. English. New Zealand.
Esmailbegi Kermani, Shokouh (364 Islamic Republic of Iran, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Rahiminejad, Mohammad Reza (364 Islamic Republic of Iran) -- Mirtadzadini, Mansour (364 Islamic Republic of Iran) -- Mummenhoff, Klaus (276 Germany) -- Al-Shehbaz, Ihsan A. (840 United States of America)
Keywords in English: Afghanistan; Cruciferae; Draba; Iran; Iraq; Physallidium; Turkmenistan
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 1/3/2018 14:47. -
ESMAILBEGI KERMANI, Shokouh, Martin LYSÁK, Mohammad Reza RAHIMINEJAD, Mansour MIRTADZADINI, Klaus MUMMENHOFF and Ihsan A. AL-SHEHBAZ. A taxonomic revision of the genus Pseudocamelina (Brasssicaceae, tribe Thlaspideae). PHYTOTAXA. AUCKLAND: MAGNOLIA PRESS, 2017, vol. 313, No 1, p. 117-129. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.313.1.8.URL
RIV/00216224:14740/17:00098206 Article in a journal. Genetics and molecular biology. English. New Zealand.
Esmailbegi Kermani, Shokouh (364 Islamic Republic of Iran, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Rahiminejad, Mohammad Reza (364 Islamic Republic of Iran) -- Mirtadzadini, Mansour (364 Islamic Republic of Iran) -- Mummenhoff, Klaus (276 Germany) -- Al-Shehbaz, Ihsan A. (840 United States of America)
Keywords in English: Camelinopsis; Cruciferae; Iran; Iraq; Pakistan
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 1/3/2018 14:31. -
MANDÁKOVÁ, Terezie, Zheng LI, Michael S. BARKER and Martin LYSÁK. Diverse genome organization following 13 independent mesopolyploid events in Brassicaceae contrasts with convergent patterns of gene retention. Plant Journal. Hoboken (USA): Wiley-Blackwell, 2017, vol. 91, No 1, p. 3-21. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.13553.URL
RIV/00216224:14740/17:00095155 Article in a journal. Genetics and molecular biology. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Li, Zheng (840 United States of America) -- Barker, Michael S. (840 United States of America) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: whole-genome duplication; mesopolyploidy; post-polyploid diploidization; biased gene retention/loss; chromosome number variation; descending dysploidy; chromosomal rearrangement; Brassicaceae
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 1/3/2018 14:37. -
RABANAL, Fernando A., Terezie MANDÁKOVÁ, Luz M. SOTO-JIMENEZ, Robert GREENHALGH, David L. PARROTT, Stefan LUTZMAYER, Joshua G. STEFFEN, Viktoria NIZHYNSKA, Richard MOTT, Martin LYSÁK, Richar M. CLARK and Magnus NORDBORG. Epistatic and allelic interactions control expression of ribosomal RNA gene clusters in Arabidopsis thaliana. GENOME BIOLOGY. LONDON: BIOMED CENTRAL LTD, 2017, vol. 18, May, p. nestránkováno, 15 pp. ISSN 1474-760X. Available from: https://dx.doi.org/10.1186/s13059-017-1209-z.URL
RIV/00216224:14740/17:00095154 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Rabanal, Fernando A. (40 Austria) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Soto-Jimenez, Luz M. (40 Austria) -- Greenhalgh, Robert (840 United States of America) -- Parrott, David L. (840 United States of America) -- Lutzmayer, Stefan (40 Austria) -- Steffen, Joshua G. (840 United States of America) -- Nizhynska, Viktoria (40 Austria) -- Mott, Richard (826 United Kingdom of Great Britain and Northern Ireland) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Clark, Richar M. (840 United States of America) -- Nordborg, Magnus (40 Austria)
Keywords in English: Ribosomes; rRNA genes; Transcription; Epistasis; Dominance
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 23/3/2018 15:28. -
MANDÁKOVÁ, Terezie, Hjortur THORBJORNSSON, Rahul PISUPATI, Ilka REICHARDT, Martin LYSÁK and Kesara ANAMTHAWAT-JONSSON. Icelandic accession of Arabidopsis thaliana confirmed with cytogenetic markers and its origin inferred from whole-genome sequencing. ICELANDIC AGRICULTURAL SCIENCES. REYKJAVIK: RANNSOKNASTOFNUN LANDBUNADARINS, 2017, vol. 30, No 2017, p. 29-38. ISSN 1670-567X. Available from: https://dx.doi.org/10.16886/IAS.2017.03.URL
RIV/00216224:14740/17:00098205 Article in a journal. Genetics and molecular biology. English. Iceland.
Mandáková, Terezie (203 Czech Republic, guarantor, belonging to the institution) -- Thorbjornsson, Hjortur (352 Iceland) -- Pisupati, Rahul (40 Austria) -- Reichardt, Ilka (40 Austria) -- Lysák, Martin (203 Czech Republic, belonging to the institution) -- Anamthawat-Jonsson, Kesara (352 Iceland)
Keywords in English: Brassicaceae; chromosome painting; comparative cytogenomics; geothermal soil; meiosis; ribosomal FISH; paracentric inversion; SNPmatch
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 1/3/2018 14:29. -
MANDÁKOVÁ, Terezie, Petra HLOUŠKOVÁ, Dmitry A. GERMAN and Martin LYSÁK. Monophyletic Origin and Evolution of the Largest Crucifer Genomes. Plant Physiology. Rockville (USA): American Society of Plant Physiologists, 2017, vol. 174, No 4, p. 2062-2071. ISSN 0032-0889. Available from: https://dx.doi.org/10.1104/pp.17.00457.URL
RIV/00216224:14740/17:00095153 Article in a journal. Genetics and molecular biology. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Hloušková, Petra (203 Czech Republic, belonging to the institution) -- German, Dmitry A. (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: BRASSICACEAE PHYLOGENY; ARABIDOPSIS-THALIANA; MOLECULAR PHYLOGENY; SEQUENCE DATA; HISTORY; BLOCKS; PLANTS; GENES
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 1/3/2018 14:33. -
MANDÁKOVÁ, Terezie, Milan POUCH, Klára HARMANOVÁ, Itay MAYROSE, Shing Hei ZHAN and Martin LYSÁK. Multispeed genome diploidization and diversification after an ancient allopolyploidization. Molecular Ecology. Blackwell Science, 2017, vol. 26, No 22, p. 6445-6462. ISSN 0962-1083. Available from: https://dx.doi.org/10.1111/mec.14379.URL
Name (in English): Multispeed genome diploidization and diversification after an ancient allopolyploidization
RIV/00216224:14740/17:00095490 Article in a journal. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Pouch, Milan (203 Czech Republic, belonging to the institution) -- Harmanová, Klára (203 Czech Republic, belonging to the institution) -- Mayrose, Itay (376 Israel) -- Zhan, Shing Hei (840 United States of America) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicaceae; comparative genomics; distant hybridization; long-distance dispersal; phylogeography; whole-genome duplication
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 15/3/2018 10:37. -
RABANAL, Fernando A., Viktoria NIZHYNSKA, Terezie MANDÁKOVÁ, Polina Yu NOVIKOVA, Martin LYSÁK, Richard MOTT and Magnus NORDBORG. Unstable Inheritance of 45S rRNA Genes in Arabidopsis thaliana. G3-Genes, Genomes, Genetics. USA: Bethesda, 2017, vol. 7, No 4, p. 1201-1209. ISSN 2160-1836. Available from: https://dx.doi.org/10.1534/g3.117.040204.URL
RIV/00216224:14740/17:00095157 Article in a journal. Genetics and molecular biology. English. United States of America.
Rabanal, Fernando A. (40 Austria) -- Nizhynska, Viktoria (40 Austria) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Novikova, Polina Yu (40 Austria) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Mott, Richard (826 United Kingdom of Great Britain and Northern Ireland) -- Nordborg, Magnus (40 Austria)
Keywords in English: ribosomes; 45S rRNA genes; natural variation; Arabidopsis thaliana
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 1/3/2018 14:39. -
LEE, Cheng-Ruei, Baosheng WANG, Julius P. MOJICA, Terezie MANDÁKOVÁ, Kasavajhala V. S. K. PRASAD, Jose Luis GOICOECHEA, Nadeesha PERERA, Uffe HELLSTEN, Hope N. HUNDLEY, Jenifer JOHNSON, Jane GRIMWOOD, Kerrie BARRY, Stephen FAIRCLOUGH, Jerry W. JENKINS, Yeisoo YU, Dave KUDRNA, Jianwei ZHANG, Jayson TALAG, Wolfgang GOLSER, Kathryn GHATTAS, M. Eric SCHRANZ, Rod WING, Martin LYSÁK, Jeremy SCHMUTZ, Daniel S. ROKHSAR and Thomas MITCHELL-OLDS. Young inversion with multiple linked QTLs under selection in a hybrid zone. Nature Ecology and Evolution. Nature Publishing Group, 2017, vol. 1, No 5, p. nestránkováno, 12 pp. ISSN 2397-334X. Available from: https://dx.doi.org/10.1038/s41559-017-0119.URL
RIV/00216224:14740/17:00095159 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Lee, Cheng-Ruei (840 United States of America) -- Wang, Baosheng (840 United States of America) -- Mojica, Julius P. (840 United States of America) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Prasad, Kasavajhala V. S. K. (840 United States of America) -- Goicoechea, Jose Luis (840 United States of America) -- Perera, Nadeesha (840 United States of America) -- Hellsten, Uffe (840 United States of America) -- Hundley, Hope N. (840 United States of America) -- Johnson, Jenifer (840 United States of America) -- Grimwood, Jane (840 United States of America) -- Barry, Kerrie (840 United States of America) -- Fairclough, Stephen (840 United States of America) -- Jenkins, Jerry W. (840 United States of America) -- Yu, Yeisoo (410 Republic of Korea) -- Kudrna, Dave (840 United States of America) -- Zhang, Jianwei (840 United States of America) -- Talag, Jayson (840 United States of America) -- Golser, Wolfgang (840 United States of America) -- Ghattas, Kathryn (840 United States of America) -- Schranz, M. Eric (528 Netherlands) -- Wing, Rod (840 United States of America) -- Lysák, Martin (203 Czech Republic) -- Schmutz, Jeremy (840 United States of America) -- Rokhsar, Daniel S. (840 United States of America) -- Mitchell-Olds, Thomas (840 United States of America)
Keywords in English: QUANTITATIVE TRAIT LOCI; GENERATION SEQUENCING DATA; ARABIDOPSIS-THALIANA; CHROMOSOMAL INVERSIONS; DROSOPHILA-MELANOGASTER; KARYOTYPE EVOLUTION; BOECHERA-STRICTA; SPECIATION; GENOME; EXPRESSION
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 29/3/2019 11:04. -
LYSÁK, Martin, Terezie MANDÁKOVÁ and M. Eric SCHRANZ. Comparative paleogenomics of crucifers: ancestral genomic blocks revisited. CURRENT OPINION IN PLANT BIOLOGY. LONDON: CURRENT BIOLOGY LTD, 2016, vol. 30, April, p. 108-115. ISSN 1369-5266. Available from: https://dx.doi.org/10.1016/j.pbi.2016.02.001.URL
RIV/00216224:14740/16:00088694 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Schranz, M. Eric (528 Netherlands)
Keywords in English: MESOHEXAPLOID BRASSICA-RAPA; KARYOTYPE EVOLUTION; ARABIDOPSIS-THALIANA; SPECIES BRASSICACEAE; RADIATION; CARDAMINE; DIVERSIFICATION; CHROMOSOMES; DIVERGENCE; PHYLOGENY
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 23/2/2017 14:35. -
MANDÁKOVÁ, Terezie, Andrew D. GLOSS, Noah K. WHITEMAN and Martin LYSÁK. How diploidization turned a tetraploid into a pseudotriploid. American Journal of Botany. St Louis: Botanical Soc Amer Inc, 2016, vol. 103, No 7, p. 1187-1196. ISSN 0002-9122. Available from: https://dx.doi.org/10.3732/ajb.1500452.URL
RIV/00216224:14740/16:00088729 Article in a journal. Genetics and molecular biology. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Gloss, Andrew D. (840 United States of America) -- Whiteman, Noah K. (840 United States of America) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicaceae; centromere loss; chromosome fusion; chromosome translocation; diploidization; dysploidy; karyotype evolution; polyploidy; whole-genome duplication
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 1/3/2017 13:57. -
JANEČKA, Jan and Martin LYSÁK. chromDraw: an R package for visualization of linear and circular karyotypes. Chromosome Research. Dordrecht: Springer, 2016, vol. 24, No 2, p. 217-223. ISSN 0967-3849. Available from: https://dx.doi.org/10.1007/s10577-015-9513-5.URL
Name in Czech: chromDraw: R balíček pro lineární a církulární vizualizaci karyotypů
RIV/00216224:14740/16:00087797 Article in a journal. Biochemistry. English. Netherlands.
Janečka, Jan (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Visualization; Chromosome; Karyotype; R
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 6/10/2017 15:51. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Chromosome Preparation for Cytogenetic Analyses in Arabidopsis. Current protocols in plant biology. John Wiley & Sons, 2016, vol. 1, No 1, p. 43-51. ISSN 2379-8068. Available from: https://dx.doi.org/10.1002/cppb.20009.URL
RIV/00216224:14740/16:00088725 Article in a journal. Genetics and molecular biology. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: arabidopsis; Brassicaceae; mitotic and meiotic chromosomes; pachytene
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 28/2/2017 15:23. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Painting of Arabidopsis Chromosomes with Chromosome-Specific BAC Clones. Current protocols in plant biology. John Wiley & Sons, 2016, vol. 4, No 2, p. 359-371. ISSN 2379-8068. Available from: https://dx.doi.org/10.1002/cppb.20022.URL
RIV/00216224:14740/16:00093748 Article in a journal. Genetics and molecular biology. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: BAC FISH; Brassicaceae; chromosome painting; fluorescence in situ hybridization (FISH); nick translation; pachytene chromosomes
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 28/2/2017 15:13. -
GEISER, Celine, Terezie MANDÁKOVÁ, Nils ARRIGO, Martin LYSÁK and Christian PARISOD. Repeated Whole-Genome Duplication, Karyotype Reshuffling, and Biased Retention of Stress-Responding Genes in Buckler Mustard. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2016, vol. 28, No 1, p. 17-27. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.15.00791.URL
RIV/00216224:14740/16:00088730 Article in a journal. Biochemistry. English. United States of America.
Geiser, Celine (756 Switzerland) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Arrigo, Nils (756 Switzerland) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Parisod, Christian (756 Switzerland)
Keywords in English: BISCUTELLA-LAEVIGATA BRASSICACEAE; PHYLOGENETIC ANALYSIS; AGE DISTRIBUTIONS; FLOWERING PLANTS; EVOLUTION; CONSEQUENCES; POLYPLOIDS; ARABIDOPSIS; PALEOPOLYPLOIDY; DIPLOIDIZATION
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 1/3/2017 14:18. -
HOHMANN, Nora, Eva M. WOLF, Martin LYSÁK and Marcus A. KOCH. A time-calibrated road map of brassicaceae species radiation and evolutionary history. The Plant Cell. Rockville (USA): American Society of Plant Biologists, 2015, vol. 27, No 10, p. 2770-2784. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.15.00482.URL
Name (in English): A time-calibrated road map of brassicaceae species radiation and evolutionary history
RIV/00216224:14740/15:00081442 Article in a journal. Botany. English. United States of America.
Hohmann, Nora (276 Germany) -- Wolf, Eva M. (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Koch, Marcus A. (276 Germany)
Keywords in English: Time-Calibrated; Brassicaceae; Evolutionary History
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 5/4/2016 13:17. -
KELLY, Laura J., Simon RENNY-BYFIELD, Jaume PELLICER, Jiří MACAS, Petr NOVÁK, Pavel NEUMANN, Martin LYSÁK, Peter D. DAY, Madeleine BERGER, Michael F. FAY, Richard A. NICHOLS, Andrew R. LEITCH and Ilia J. LEITCH. Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size. New Phytologist. HOBOKEN: WILEY-BLACKWELL, 2015, vol. 208, No 2, p. 596-607. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.13471.URL
RIV/00216224:14740/15:00081441 Article in a journal. Botany. English. United States of America.
Kelly, Laura J. (826 United Kingdom of Great Britain and Northern Ireland) -- Renny-Byfield, Simon (826 United Kingdom of Great Britain and Northern Ireland) -- Pellicer, Jaume (840 United States of America) -- Macas, Jiří (203 Czech Republic) -- Novák, Petr (203 Czech Republic) -- Neumann, Pavel (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Day, Peter D. (826 United Kingdom of Great Britain and Northern Ireland) -- Berger, Madeleine (826 United Kingdom of Great Britain and Northern Ireland) -- Fay, Michael F. (826 United Kingdom of Great Britain and Northern Ireland) -- Nichols, Richard A. (826 United Kingdom of Great Britain and Northern Ireland) -- Leitch, Andrew R. (826 United Kingdom of Great Britain and Northern Ireland) -- Leitch, Ilia J. (826 United Kingdom of Great Britain and Northern Ireland)
Keywords in English: DNA deletion; Fritillaria; genome size evolution; genome turnover; Liliaceae; repetitive DNA; transposable elements (TEs)
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 5/4/2016 13:09. -
TAN, Ek Han, Isabelle M. HENRY, Maruthachalam RAVI, Keith R. BRADNAM, Terezie MANDÁKOVÁ, Mohan P. A. MURIMUTHU, Ian KORF, Martin LYSÁK, Luca COMAI and Simon W. L. CHAN. Catastrophic chromosomal restructuring during genome elimination in plants. eLife. Oxford: eLife Sciences Publications, 2015, vol. 4, may, p. "nestránkováno", 16 pp. ISSN 2050-084X. Available from: https://dx.doi.org/10.7554/eLife.06516.URL
RIV/00216224:14740/15:00081230 Article in a journal. Biochemistry. English. United Kingdom of Great Britain and Northern Ireland.
Tan, Ek Han (840 United States of America) -- Henry, Isabelle M. (840 United States of America) -- Ravi, Maruthachalam (356 India) -- Bradnam, Keith R. (840 United States of America) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Murimuthu, Mohan P. A. (840 United States of America) -- Korf, Ian (840 United States of America) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Comai, Luca (840 United States of America) -- Chan, Simon W. L. (840 United States of America)
Keywords in English: Arabidopsis thaliana; Article; chromosome analysis; chromosome rearrangement; copy number variation
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 28/3/2019 15:29. -
WILLING, Eva-Maria, Vimal RAWAT, Terezie MANDÁKOVÁ, Florian MAUMUS, Geo Velikkakam JAMES, Karl J. V. NORDSTROM, Claude BECKER, Norman WARTHMANN, Claudia CHICA, Bogna SZARZYNSKA, Matthias ZYTNICKI, Maria C. ALBANI, Christiane KIEFER, Sara BERGONZI, Loren CASTAINGS, Julieta L. MATEOS, Markus C. BERNS, Nora BUJDOSO, Thomas PIOFCZYK, Laura DE LORENZO, Cristina BARRERO-SICILIA, Isabel MATEOS, Mathieu PIEDNOEL, Joerg HAGMANN, Romy CHEN-MIN-TAO, Raquel IGLESIAS-FERNANDEZ, Stephan C. SCHUSTER, Carlos ALONSO-BLANCO, Francois ROUDIER, Pilar CARBONERO, Javier PAZ-ARES, Seth J. DAVIS, Aleš PEČINKA, Hadi QUESNEVILLE, Vincent COLOT, Martin LYSÁK, Detlef WEIGEL, George COUPLAND and Korbinian SCHNEEBERGER. Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation. NATURE PLANTS. LONDON: NATURE PUBLISHING GROUP, 2015, vol. 1, No 2, p. 1-7. ISSN 2055-026X. Available from: https://dx.doi.org/10.1038/NPLANTS.2014.23.URL
RIV/00216224:14740/15:00081444 Article in a journal. Botany. English. United Kingdom of Great Britain and Northern Ireland.
Willing, Eva-Maria (276 Germany) -- Rawat, Vimal (276 Germany) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Maumus, Florian (250 France) -- James, Geo Velikkakam (276 Germany) -- Nordstrom, Karl J. V. (276 Germany) -- Becker, Claude (276 Germany) -- Warthmann, Norman (276 Germany) -- Chica, Claudia (250 France) -- Szarzynska, Bogna (250 France) -- Zytnicki, Matthias (250 France) -- Albani, Maria C. (276 Germany) -- Kiefer, Christiane (276 Germany) -- Bergonzi, Sara (276 Germany) -- Castaings, Loren (276 Germany) -- Mateos, Julieta L. (276 Germany) -- Berns, Markus C. (276 Germany) -- Bujdoso, Nora (276 Germany) -- Piofczyk, Thomas (276 Germany) -- de Lorenzo, Laura (724 Spain) -- Barrero-Sicilia, Cristina (724 Spain) -- Mateos, Isabel (724 Spain) -- Piednoel, Mathieu (276 Germany) -- Hagmann, Joerg (276 Germany) -- Chen-Min-Tao, Romy (250 France) -- Iglesias-Fernandez, Raquel (724 Spain) -- Schuster, Stephan C. (840 United States of America) -- Alonso-Blanco, Carlos (724 Spain) -- Roudier, Francois (724 Spain) -- Carbonero, Pilar (724 Spain) -- Paz-Ares, Javier (724 Spain) -- Davis, Seth J. (276 Germany) -- Pečinka, Aleš (203 Czech Republic) -- Quesneville, Hadi (250 France) -- Colot, Vincent (250 France) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Weigel, Detlef (276 Germany) -- Coupland, George (276 Germany) -- Schneeberger, Korbinian (276 Germany)
Keywords in English: ARABIDOPSIS-THALIANA; PROVIDES INSIGHT; EVOLUTION; LYRATA; DIVERGENCE; SEQUENCE; REVEALS; SIZE
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 5/4/2016 13:39. -
MANDÁKOVÁ, Terezie, Vasantika SINGH, Ute KRAMER and Martin LYSÁK. Genome Structure of the Heavy Metal Hyperaccumulator Noccaea caerulescens and Its Stability on Metalliferous and Nonmetalliferous Soils. Plant Physiology. Rockville (USA): American Society of Plant Physiologists, 2015, vol. 169, No 1, p. "674"-"+", 22 pp. ISSN 0032-0889. Available from: https://dx.doi.org/10.1104/pp.15.00619.URL
RIV/00216224:14740/15:00081228 Article in a journal. Morphological game parks and cytology. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Singh, Vasantika (276 Germany) -- Kramer, Ute (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: THLASPI-CAERULESCENS; ARABIDOPSIS-HALLERI; ZINC ACCUMULATION; DROSOPHILA-MELANOGASTER; PERICENTRIC INVERSIONS; EXPRESSION DIFFERENCES; KARYOTYPE EVOLUTION; BRASSICACEAE; GENES; NICOTIANAMINE
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 4/4/2016 10:42. -
JANEČKA, Jan and Martin LYSÁK. chromDraw: a bioinformatic tool for visualization of linear and circular karyotypes. In The Biomania - Student Scientific Meeting 2015. 2015. ISBN 978-80-210-7933-5.
Biochemistry. English. Czech Republic.
Keywords in English: R, karyotype, visualization
Reviewed: yes
Changed by: Mgr. Ing. Jan Janečka, učo 418142. Changed: 13/10/2015 09:07. -
JANEČKA, Jan and Martin LYSÁK. chromDraw: an R package for visualization of linear and circular karyotypes. In CEITEC PhD Retreat. 2015. ISBN 978-80-210-7825-3.URL
Name (in English): chromDraw: an R package for visualization of linear and circular karyotypes
Biochemistry. English. Czech Republic.
Keywords in English: visualization, chromosome, karyotype, R
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. Ing. Jan Janečka, učo 418142. Changed: 13/10/2015 08:51. -
JANEČKA, Jan and Martin LYSÁK. chromDraw for visualization of linear and circular karyotypes. In European Bioconductor Developers' Meeting 2015. 2015.URL
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. Ing. Jan Janečka, učo 418142. Changed: 2/7/2016 10:07. -
MANDÁKOVÁ, Terezie, M. Eric SCHRANZ, Timothy F. SHARBEL, Hans DE JONG and Martin LYSÁK. Karyotype evolution in apomictic Boechera and the origin of the aberrant chromosomes. Plant Journal. Hoboken (USA): Wiley-Blackwell, 2015, vol. 82, No 5, p. 785-793. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.12849.URL
RIV/00216224:14740/15:00081229 Article in a journal. Morphological game parks and cytology. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Schranz, M. Eric (528 Netherlands) -- Sharbel, Timothy F. (276 Germany) -- de Jong, Hans (528 Netherlands) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Boechera; Brassicaceae; apomixis; chromosome fission; karyotype evolution; heterochromatin; centromere inactivation
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 4/4/2016 10:47. -
CHENG, F., Martin LYSÁK, Terezie MANDÁKOVÁ and X. WANG. The Common Ancestral Genome of the Brassica Species. In Wang X. ; Kole CH. The Brassica rapa Genome. Německo: Springer Berlin Heidelberg, 2015, p. 97-105. Compendium of Plant Genomes. ISBN 978-3-662-47900-1. Available from: https://dx.doi.org/10.1007/978-3-662-47901-8_8.URL
Name (in English): The Common Ancestral Genome of the Brassica Species
RIV/00216224:14740/15:00085821 Chapter(s) of a specialized book. Botany. English. Germany.
Cheng, F. (156 China) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Wang, X. (156 China)
Keywords in English: Brassica species; chromosomes; genetic studies
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 12/4/2016 09:34. -
LEXA, Matej, Lenka RADOVÁ, Martin LYSÁK, Tomáš MARTÍNEK, Nikola TOM, Karol PÁL, Alexandru POPA and Jana KAPUSTOVÁ. Bioinformatics Summer School 2014: Theoretical and practical aspects of processing and analysis of sequencing data. 2014. Available from: https://dx.doi.org/10.13140/RG.2.1.4517.0721.Summer school homepage
RIV/00216224:14330/14:00079922 Organization of a workshop. Genetics and molecular biology. English. Czech Republic.
Lexa, Matej (703 Slovakia, guarantor, belonging to the institution) -- Radová, Lenka (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution) -- Martínek, Tomáš (203 Czech Republic) -- Tom, Nikola (203 Czech Republic, belonging to the institution) -- Pál, Karol (703 Slovakia, belonging to the institution) -- Popa, Alexandru (642 Romania, belonging to the institution) -- Kapustová, Jana (203 Czech Republic)
Keywords in English: next generation sequencing; bioinformatics
Changed by: doc. Ing. Matej Lexa, Ph.D., učo 31298. Changed: 13/3/2018 14:06. -
KIEFER, Markus, Roswitha SCHMICKL, Dmitry A. GERMAN, Terezie MANDÁKOVÁ, Martin LYSÁK, Ihsan A. AL-SHEHBAZ, Andreas FRANZKE, Klaus MUMMENHOFF, Alexandros STAMATAKIS and Marcus A. KOCH. BrassiBase: Introduction to a Novel Knowledge Database on Brassicaceae Evolution. PLANT AND CELL PHYSIOLOGY. Oxford: Oxford University Press, 2014, vol. 55, No 1, p. "nestránkováno", 9 pp. ISSN 0032-0781. Available from: https://dx.doi.org/10.1093/pcp/pct158.URL
RIV/00216224:14740/14:00074933 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Kiefer, Markus (276 Germany) -- Schmickl, Roswitha (276 Germany) -- German, Dmitry A. (276 Germany) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Al-Shehbaz, Ihsan A. (840 United States of America) -- Franzke, Andreas (276 Germany) -- Mummenhoff, Klaus (276 Germany) -- Stamatakis, Alexandros (276 Germany) -- Koch, Marcus A. (276 Germany)
Keywords in English: BrassiBase; Brassicaceae; Evolution; Knowledge database
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 11/3/2015 13:41. -
HAY, Angela S., Bjorn PIEPER, Elizabeth COOKE, Terezie MANDÁKOVÁ, Maria CARTOLANO, Alexander D. TATTERSALL, Raffaele D. IOIO, Simon J. MCGOWAN, Michalis BARKOULAS, Carla GALINHA, Madlen I. RAST, Hugo HOFHUIS, Christiane THEN, Jörg PLIESKE, Martin GANAL, Richard MOTT, Jaime F. MARTINEZ- GARCIA, Mark A. CARINE, Robert W. SCOTLAND, Xiangchao GAN, Dmitry A. FILATOV, Martin LYSÁK and Miltos TSIANTIS. Cardamine hirsuta: a versatile genetic system for comparative studies. The Plant Journal. Hoboken (USA): Blackwell Science, 2014, vol. 78, No 1, p. 1-15. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.12447.URL
RIV/00216224:14740/14:00074132 Article in a journal. Genetics and molecular biology. English. United States of America.
Hay, Angela S. (276 Germany) -- Pieper, Bjorn (826 United Kingdom of Great Britain and Northern Ireland) -- Cooke, Elizabeth (826 United Kingdom of Great Britain and Northern Ireland) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Cartolano, Maria (276 Germany) -- Tattersall, Alexander D. (826 United Kingdom of Great Britain and Northern Ireland) -- Ioio, Raffaele D. (276 Germany) -- McGowan, Simon J. (826 United Kingdom of Great Britain and Northern Ireland) -- Barkoulas, Michalis (826 United Kingdom of Great Britain and Northern Ireland) -- Galinha, Carla (826 United Kingdom of Great Britain and Northern Ireland) -- Rast, Madlen I. (276 Germany) -- Hofhuis, Hugo (276 Germany) -- Then, Christiane (724 Spain) -- Plieske, Jörg (276 Germany) -- Ganal, Martin (276 Germany) -- Mott, Richard (826 United Kingdom of Great Britain and Northern Ireland) -- Martinez- Garcia, Jaime F. (724 Spain) -- Carine, Mark A. (826 United Kingdom of Great Britain and Northern Ireland) -- Scotland, Robert W. (826 United Kingdom of Great Britain and Northern Ireland) -- Gan, Xiangchao (276 Germany) -- Filatov, Dmitry A. (826 United Kingdom of Great Britain and Northern Ireland) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Tsiantis, Miltos (276 Germany)
Keywords in English: ARABIDOPSIS-THALIANA; SHADE AVOIDANCE; ARABIS-ALPINA; GENOME SIZE; BRASSICACEAE; EVOLUTION; DIVERSITY; EXPRESSION; DROSOPHILA; PATTERNS
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 26/11/2014 08:12. -
LYSÁK, Martin and Paul F. FRANSZ. From transposon to chromosome and polyploidy. An update on cytogenetics and genomics of Arabidopsis. Chromosome Research. Dordrecht: Springer, 2014, vol. 22, No 2, p. 99-101. ISSN 0967-3849. Available from: https://dx.doi.org/10.1007/s10577-014-9427-7.URL
Genetics and molecular biology. English. Netherlands.
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 26/11/2014 10:22. -
MAJEROVÁ, Eva, Terezie MANDÁKOVÁ, GTH VU, Jiří FAJKUS, Martin LYSÁK and Miloslava FOJTOVÁ. Chromatin features of plant telomeric sequences at terminal vs. internal positions. Frontiers in Plant Science. LAUSANNE: Frontiers Research Foundation, 2014, vol. 5, November, p. "nestránkováno", 10 pp. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2014.00593.URL
RIV/00216224:14740/14:00074402 Article in a journal. Genetics and molecular biology. English. Switzerland.
Majerová, Eva (203 Czech Republic, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Vu, GTH (276 Germany) -- Fajkus, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Lysák, Martin (203 Czech Republic, belonging to the institution) -- Fojtová, Miloslava (203 Czech Republic, belonging to the institution)
Keywords in English: telomere; chromatin; epigenetics; Nicotiana tabacum; Ballantinia antipoda; histone modifications; DNA methylation
International impact: yes
Reviewed: yes
Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 10/12/2019 09:57. -
LYSÁK, Martin. Live and let die: centromere loss during evolution of plant chromosomes. New Phytologist. Hoboken: WILEY-BLACKWELL, 2014, vol. 203, No 4, p. 1082-1089. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.12885.URL
RIV/00216224:14740/14:00074133 Article in a journal. Genetics and molecular biology. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: DICENTRIC CHROMOSOMES; KARYOTYPE EVOLUTION; GENOME SIZE; ARABIDOPSIS-THALIANA; NUMBER REDUCTION; BREAKAGE-FUSION; PHYSICAL MAP; HISTONE H3; MAIZE; INACTIVATION
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 26/11/2014 08:59. -
ZOZOMOVÁ-LIHOVÁ, Judita, Karol KRAK, Terezie MANDÁKOVÁ, Kentaro K. SHIMIZU, Stanislav ŠPANIEL, Petr VÍT and Martin LYSÁK. Multiple hybridization events in Cardamine (Brassicaceae) during the last 150 years: revisiting a textbook example of neoallopolyploidy. Annals of Botany. Oxford: Oxford University Press, 2014, vol. 113, No 5, p. 817-830. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcu012.URL
RIV/00216224:14740/14:00074136 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Zozomová-Lihová, Judita (703 Slovakia) -- Krak, Karol (203 Czech Republic) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Shimizu, Kentaro K. (756 Switzerland) -- Španiel, Stanislav (203 Czech Republic) -- Vít, Petr (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: MULTILOCUS GENOTYPE DATA; POPULATION-STRUCTURE; TRAGOPOGON ASTERACEAE; ALLOPOLYPLOID ORIGIN; RECURRENT FORMATION; AMARA BRASSICACEAE; MOLECULAR EVIDENCE; HYBRID SPECIATION; GENETIC DIVERSITY; GENOME EVOLUTION
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 26/11/2014 11:43. -
MANDÁKOVÁ, Terezie, Karol MARHOLD and Martin LYSÁK. The widespread crucifer species Cardamine flexuosa is an allotetraploid with a conserved subgenomic structure. New Phytologist. Hoboken: WILEY-BLACKWELL, 2014, vol. 201, No 3, p. 982-992. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.12567.URL
RIV/00216224:14740/14:00073464 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Marhold, Karol (703 Slovakia) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Brassicaceae; Cardamine flexuosa (Wavy Bittercress); chromosome painting; genome collinearity; GISH (genomic in situ hybridization); intergenome translocation; polyploidy
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 15/8/2014 12:32. -
ZOZOMOVÁ-LIHOVÁ, Judita, Terezie MANDÁKOVÁ, Alena KOVAŘÍKOVÁ, Andreas MÜHLHAUSEN, Klaus MUMMENHOFF, Martin LYSÁK and Aleš KOVAŘÍK. When fathers are instant losers: homogenization of rDNA loci in recently formed Cardamine X schulzii trigenomic allopolyploid. New Phytologist. Hoboken: WILEY-BLACKWELL, 2014, vol. 203, No 4, p. 1096-1108. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.12873.URL
RIV/00216224:14740/14:00074135 Article in a journal. Genetics and molecular biology. English. United States of America.
Zozomová-Lihová, Judita (703 Slovakia) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Kovaříková, Alena (203 Czech Republic) -- Mühlhausen, Andreas (276 Germany) -- Mummenhoff, Klaus (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Kovařík, Aleš (203 Czech Republic)
Keywords in English: NUCLEAR RIBOSOMAL DNA; RNA GENE SITES; CONCERTED EVOLUTION; TRAGOPOGON ASTERACEAE; NATURAL-POPULATIONS; SENECIO-CAMBRENSIS; MOLECULAR EVIDENCE; BRASSICA-NAPUS; PARENTAL RDNA; GENOME
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 11/3/2015 13:49. -
HAUNDRY, Annabelle, Adrian E. PLATTS, Emilio VELLO, Douglas R. HOEN, Mickael LECLERCQ, Robert J. WILLIAMSON, Ewa FORCZEK, Zoé JOLY-LOPEZ, Joshua G. STEFFEN, Khaled M. HAZZOURI, Ken DEWAR, John R. STINCHCOMBE, Daniel J. SCHOEN, Xiaowu WANG, Jeremy SCHMUTZ, Christopher D. TOWN, Patrick P. EDGER, J. Chris PIRES, Karen S. SCHUMAKER, David E. JARVIS, Terezie MANDÁKOVÁ, Martin LYSÁK, Erik VAN DEN BERGH, M. Eric SCHRANZ, Paul M. HARRISON, Alan M. MOSES, Thomas E. BUREAU, Stephen I. WRIGHT and Mathieu BLANCHETTE. An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nature Genetics. New York: Nature Publishing Group, 2013, vol. 45, No 8, p. 891-"U228", 10 pp. ISSN 1061-4036. Available from: https://dx.doi.org/10.1038/ng.2684.URL
RIV/00216224:14740/13:00066454 Article in a journal. Genetics and molecular biology. English. United States of America.
Haundry, Annabelle (250 France) -- Platts, Adrian E. (124 Canada) -- Vello, Emilio (124 Canada) -- Hoen, Douglas R. (124 Canada) -- Leclercq, Mickael (124 Canada) -- Williamson, Robert J. (124 Canada) -- Forczek, Ewa (124 Canada) -- Joly-Lopez, Zoé (124 Canada) -- Steffen, Joshua G. (840 United States of America) -- Hazzouri, Khaled M. (124 Canada) -- Dewar, Ken (124 Canada) -- Stinchcombe, John R. (124 Canada) -- Schoen, Daniel J. (124 Canada) -- Wang, Xiaowu (156 China) -- Schmutz, Jeremy (840 United States of America) -- Town, Christopher D. (724 Spain) -- Edger, Patrick P. (840 United States of America) -- Pires, J. Chris (840 United States of America) -- Schumaker, Karen S. (840 United States of America) -- Jarvis, David E. (840 United States of America) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- van den Bergh, Erik (528 Netherlands) -- Schranz, M. Eric (528 Netherlands) -- Harrison, Paul M. (124 Canada) -- Moses, Alan M. (124 Canada) -- Bureau, Thomas E. (124 Canada) -- Wright, Stephen I. (124 Canada) -- Blanchette, Mathieu (124 Canada)
Keywords in English: ARABIDOPSIS-THALIANA; HUMAN GENOME; DNA ELEMENTS; ULTRACONSERVED ELEMENTS; BRASSICA-OLERACEA; GENE-EXPRESSION; EVOLUTION; DROSOPHILA; SIZE; ANNOTATION
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 25/4/2014 16:54. -
LYSÁK, Martin and Terezie MANDÁKOVÁ. Analysis of Plant Meiotic Chromosomes by Chromosome Painting. In Pawlowski Wojciech P.; Grelon Mathidle; Armstrong Susan. Plant Meiosis: Methods and Protocols. New York: Humana Press, 2013, p. 13-24. Part 1. ISBN 978-1-62703-332-9. Available from: https://dx.doi.org/10.1007/978-1-62703-333-6_2.URL
RIV/00216224:14740/13:00065831 Chapter(s) of a specialized book. Genetics and molecular biology. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution)
Keywords in English: Chromosome painting; Fluorescence in situ hybridization; BAC FISH; Pachytene chromosomes; DNA labeling
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 11/4/2014 15:22. -
CHENG, Feng, Terezie MANDÁKOVÁ, Jian WU, Qi XIE, Martin LYSÁK and Xiaowu WANG. Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa. Plant Cell. AMER SOC PLANT BIOLOGISTS, 2013, vol. 25, No 5, p. 1541-1554. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.113.110486.URL
RIV/00216224:14740/13:00066451 Article in a journal. Genetics and molecular biology. English. United States of America.
Cheng, Feng (156 China) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Wu, Jian (156 China) -- Xie, Qi (156 China) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Wang, Xiaowu (156 China)
Keywords in English: CHROMOSOME-NUMBER REDUCTION; ARABIDOPSIS-THALIANA; SPECIES BRASSICACEAE; KARYOTYPE EVOLUTION; RAPHANUS-SATIVUS; SEQUENCE; PHYLOGENY; MAP; BLOCKS; RECONSTRUCTION
International impact: yes
Reviewed: yes
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 25/1/2017 12:54. -
LONG, Quan, Fernando A. RABANAL, Dazhe MENG, Christian D. HUBER, Ashley FARLOW, Alexander PLATZER, Qingrun ZHANG, Bjarni J. VILHJÁLMSSON, Arthur KORTE, Viktoria NIZHYNSKA, Viktor VORONIN, Pamela KORTE, Laura SEDMAN, Terezie MANDÁKOVÁ, Martin LYSÁK, Uemit SEREN, Ines HELLMANN and Magnus NORDBORG. Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden. Nature Genetics. New York: Nature Publishing Group, 2013, vol. 45, No 8, p. 884-"U218", 8 pp. ISSN 1061-4036. Available from: https://dx.doi.org/10.1038/ng.2678.URL
RIV/00216224:14740/13:00066452 Article in a journal. Genetics and molecular biology. English. United States of America.
Long, Quan (40 Austria) -- Rabanal, Fernando A. (40 Austria) -- Meng, Dazhe (840 United States of America) -- Huber, Christian D. (40 Austria) -- Farlow, Ashley (40 Austria) -- Platzer, Alexander (40 Austria) -- Zhang, Qingrun (40 Austria) -- Vilhjálmsson, Bjarni J. (840 United States of America) -- Korte, Arthur (40 Austria) -- Nizhynska, Viktoria (40 Austria) -- Voronin, Viktor (40 Austria) -- Korte, Pamela (40 Austria) -- Sedman, Laura (40 Austria) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Seren, Uemit (40 Austria) -- Hellmann, Ines (40 Austria) -- Nordborg, Magnus (840 United States of America)
Keywords in English: RIBOSOMAL-RNA GENES; LINKAGE DISEQUILIBRIUM; WIDE ASSOCIATION; NATURAL VARIATION; DNA; POPULATIONS; SEQUENCE; POLYMORPHISM; METHYLATION; ACCESSIONS
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 25/4/2014 16:52. -
SLOTTE, Tanja, Khaled M. HAZZOURI, J. Arvid AGREN, Daniel KOENIG, Florian MAUMUS, Ya-Long GUO, Kim STEIGE, Adrian E. PLATTS, Juan S. ESCOBAR, L. Killian NEWMAN, Wei WANG, Terezie MANDÁKOVÁ, Emilio VELLO, Lisa M. SMITH, Stefan R. HENZ, Joshua STEFFEN, Shohei TAKUNO, Yaniv BRANDVAIN, Graham COOP, Peter ANDOLFATTO, Tina T. HU, Mathieu BLANCHETTE, Richard M. CLARK, Hadi QUESNEVILLE, Magnus NORDBORG, Brandon S. GAUT, Martin LYSÁK, Jerry JENKINS, Jane GRIMWOOD, Jarrod CHAPMAN, Simon PROCHNIK, Shengqiang SHU, Daniel ROKHSAR, Jeremy SCHMUTZ, Detlef WEIGEL and Stephen I. WRIGHT. The Capsella rubella genome and the genomic consequences of rapid mating system evolution. Nature Genetics. New York: Nature Publishing Group, 2013, vol. 45, No 7, p. 831-"U165", 7 pp. ISSN 1061-4036. Available from: https://dx.doi.org/10.1038/ng.2669.URL
RIV/00216224:14740/13:00066453 Article in a journal. Genetics and molecular biology. English. United States of America.
Slotte, Tanja (752 Sweden) -- Hazzouri, Khaled M. (784 United Arab Emirates) -- Agren, J. Arvid (124 Canada) -- Koenig, Daniel (276 Germany) -- Maumus, Florian (250 France) -- Guo, Ya-Long (156 China) -- Steige, Kim (752 Sweden) -- Platts, Adrian E. (124 Canada) -- Escobar, Juan S. (124 Canada) -- Newman, L. Killian (124 Canada) -- Wang, Wei (124 Canada) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Vello, Emilio (124 Canada) -- Smith, Lisa M. (276 Germany) -- Henz, Stefan R. (276 Germany) -- Steffen, Joshua (840 United States of America) -- Takuno, Shohei (840 United States of America) -- Brandvain, Yaniv (840 United States of America) -- Coop, Graham (840 United States of America) -- Andolfatto, Peter (840 United States of America) -- Hu, Tina T. (840 United States of America) -- Blanchette, Mathieu (124 Canada) -- Clark, Richard M. (840 United States of America) -- Quesneville, Hadi (250 France) -- Nordborg, Magnus (40 Austria) -- Gaut, Brandon S. (840 United States of America) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Jenkins, Jerry (840 United States of America) -- Grimwood, Jane (826 United Kingdom of Great Britain and Northern Ireland) -- Chapman, Jarrod (840 United States of America) -- Prochnik, Simon (840 United States of America) -- Shu, Shengqiang (840 United States of America) -- Rokhsar, Daniel (840 United States of America) -- Schmutz, Jeremy (840 United States of America) -- Weigel, Detlef (276 Germany) -- Wright, Stephen I. (124 Canada)
Keywords in English: ARABIDOPSIS-THALIANA; TRANSPOSABLE ELEMENTS; MOLECULAR EVOLUTION; RECENT SPECIATION; SEQUENCE; EXPRESSION; GENES; GRANDIFLORA; ANNOTATION; MUTATIONS
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 25/4/2014 16:53. -
MANDÁKOVÁ, Terezie, Aleš KOVAŘÍK, Judita ZOZOMOVÁ-LIHOVÁ, Rie SHIMIZU-INATSUGI, Kentaro K. SHIMIZU, Klaus MUMMENHOFF, Karol MARHOLD and Martin LYSÁK. The More the Merrier: Recent Hybridization and Polyploidy in Cardamine. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2013, vol. 25, No 9, p. 3280-3295. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.113.114405.URL
RIV/00216224:14740/13:00066729 Article in a journal. Genetics and molecular biology. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Kovařík, Aleš (203 Czech Republic) -- Zozomová-Lihová, Judita (703 Slovakia) -- Shimizu-Inatsugi, Rie (392 Japan) -- Shimizu, Kentaro K. (392 Japan) -- Mummenhoff, Klaus (276 Germany) -- Marhold, Karol (703 Slovakia) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: CHROMOSOME-NUMBER REDUCTION; MIXED-PLOIDY POPULATIONS; NUCLEAR RIBOSOMAL DNA; COMPARATIVE GENOMICS; ARABIDOPSIS-THALIANA; GENETIC-VARIATION; VASCULAR PLANTS; FLOW-CYTOMETRY; BRASSICACEAE; EVOLUTION
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 13/2/2014 13:11. -
HEENAN, Peter B, Dagmar F GOEKE, Gary J HOULISTON and Martin LYSÁK. Phylogenetic analyses of ITS and rbcL DNA sequences for sixteen genera of Australian and New Zealand Brassicaceae result in the expansion of the tribe Microlepidieae. Taxon. Bratislava: International Assoc. for Plant Taxonomy, 2012, vol. 61, No 5, p. 970-979. ISSN 0040-0262.URL
RIV/00216224:14740/12:00057134 Article in a journal. Morphological game parks and cytology. English. Slovakia.
Heenan, Peter B (554 New Zealand) -- Goeke, Dagmar F (554 New Zealand) -- Houliston, Gary J (554 New Zealand) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Australian flora; Brassicaceae; Microlepidieae; New Zealand flora; tribal classification
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 6/4/2013 17:20. -
MANDÁKOVÁ, Terezie, Klaus MUMMENHOFF, Ihsan A AL-SHEHBAZ, Ladislav MUCINA, Andreas MUEHLHAUSEE and Martin LYSÁK. Whole-genome triplication and species radiation in the southern African tribe Heliophileae (Brassicaceae). Taxon. Bratislava: International Assoc. for Plant Taxonomy, 2012, vol. 61, No 5, p. 989-1000. ISSN 0040-0262.URL
RIV/00216224:14740/12:00057133 Article in a journal. Genetics and molecular biology. English. Slovakia.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Mummenhoff, Klaus (276 Germany) -- Al-Shehbaz, Ihsan A (840 United States of America) -- Mucina, Ladislav (40 Austria) -- Muehlhausee, Andreas (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Cape flora; chromosome painting; comparative phylogenomics; Heliophila; ITS; karyotype evolution; phylogenetics; polyploidy; rDNA; whole-genome duplication
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 6/4/2013 17:33. -
FRANZKE, Andreas, Martin LYSÁK, Ihsan A. AL-SHEHBAZ, Marcus A. KOCH and Klaus MUMMENHOFF. Cabbage family affairs: the evolutionary history of Brassicaceae. TRENDS in Plant Science. London: ELSEVIER SCIENCE LONDON, 2011, vol. 16, No 2, p. 108-116. ISSN 1360-1385. Available from: https://dx.doi.org/10.1016/j.tplants.2010.11.005.
Name (in English): Cabbage family affairs: the evolutionary history of Brassicaceae
RIV/00216224:14740/11:00049461 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Franzke, Andreas (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Al-Shehbaz, Ihsan A. (840 United States of America) -- Koch, Marcus A. (276 Germany) -- Mummenhoff, Klaus (276 Germany)
Keywords in English: Brassicaceae; crucifers; genome evolution; phylogenetics; plant systematics;
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 25/1/2017 12:48. -
ZIOLKOWSKI, Piotr A., Martin LYSÁK and Waheeb K. HENEEN. Cytogenetic studies in vegetable Brassicas. In Genetics, Genomics and Breeding of Vegetable Brassicas. Enfield: Science Publishers, 2011, p. 257-303, 46 pp. Genetics, Genomics and Breeding of Crop Plants. ISBN 978-1-57808-706-8.
RIV/00216224:14740/11:00049465 Chapter(s) of a specialized book. Genetics and molecular biology. English. United States of America.
Ziolkowski, Piotr A. (616 Poland) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Heneen, Waheeb K. (752 Sweden)
Keywords in English: Brassicaceae; crucifers; genome evolution; cytogenetics;
Changed by: Mgr. Nikola Kostlánová, Ph.D., učo 12689. Changed: 20/3/2012 13:48. -
AMBROŽOVÁ, Kateřina, Terezie MANDÁKOVÁ, Petr BUREŠ, Pavel NEUMANN, Ilia J. LEITCH, Andrea KOBLÍŽKOVÁ, Jiří MACAS and Martin LYSÁK. Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies. Annals of Botany. Oxford: Oxford University Press, 2011, vol. 107, No 2, p. 255-268. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcq235.URL
Name in Czech: Různé rodiny transpozonů a AT bohaté satelitní repetice zjištěny v obřích genome rodu Fritillaria
Name (in English): Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies
RIV/00216224:14740/11:00049704 Article in a journal. Botany. English. United Kingdom of Great Britain and Northern Ireland.
Ambrožová, Kateřina (203 Czech Republic, guarantor, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Bureš, Petr (203 Czech Republic, belonging to the institution) -- Neumann, Pavel (203 Czech Republic) -- Leitch, Ilia J. (826 United Kingdom of Great Britain and Northern Ireland) -- Koblížková, Andrea (203 Czech Republic) -- Macas, Jiří (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, belonging to the institution)
Keywords in English: Liliaceae; repetitive DNA; transposable elements; retrotransposon; heterochromatin; satellite repeats; chromosomes; genome size variation
Changed by: Mgr. Eva Doležalová, učo 74354. Changed: 20/4/2012 13:38. -
SCHUBERT, Ingo and Martin LYSÁK. Interpretation of karyotype evolution should consider chromosome structural constraints. Trends in Genetics. Elsevier Trends Journals, 2011, vol. 27, No 6, p. 207-216. ISSN 0168-9525. Available from: https://dx.doi.org/10.1016/j.tig.2011.03.004.
RIV/00216224:14740/11:00049462 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Schubert, Ingo (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: karyotype evolution; chromosome rearrangements; comparative genomics;
International impact: yes
Reviewed: yes
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 25/1/2017 12:51. -
GERMAN, Dmitry A., Jason R. GRANT, Martin LYSÁK and Ihsan A. AL-SHEHBAZ. Molecular phylogeny and systematics of the tribe Chorisporeae (Brassicaceae). Plant Systematics and Evolution. Wien: Springer-Verlag, 2011, vol. 294, 1-2, p. 65-86. ISSN 0378-2697. Available from: https://dx.doi.org/10.1007/s00606-011-0452-0.
RIV/00216224:14740/11:00049464 Article in a journal. Genetics and molecular biology. English. Austria.
German, Dmitry A. (643 Russian Federation, belonging to the institution) -- Grant, Jason R. (756 Switzerland) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Al-Shehbaz, Ihsan A. (840 United States of America)
Keywords in English: Brassicaceae; crucifers; molecular phylogenetics; plant systematics;
International impact: yes
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 25/1/2017 12:53. -
LYSÁK, Martin and Marcus A. KOCH. Phylogeny, Genome, and Karyotype Evolution of Crucifers (Brassicaceae). Online. In Genetics and Genomics of the Brassicaceae. New York: Springer Science+Business Media, 2011, p. 1-31. Plant Genetics and Genomics: Crops and Models, 9. ISBN 978-1-4419-7117-3. Available from: https://dx.doi.org/10.1007/978-1-4419-7118-0_1.
RIV/00216224:14740/11:00049463 Chapter(s) of a specialized book. Genetics and molecular biology. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Koch, Marcus A. (276 Germany)
Keywords in English: Brassicaceae; crucifers; genome evolution; phylogenetics; plant systematics;
Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 16/6/2020 09:50. -
LYSÁK, Martin. Between Arabidopsis and cabbage: a decade of crucifer cytogenomics. In 10th Gatersleben Research Conference (GRCX) 2010. 2010.
Name in Czech: Dekáda cytogenomiky brukvovitých
Name (in English): Between Arabidopsis and cabbage: a decade of crucifer cytogenomics
RIV/00216224:14310/10:00040686 Conference abstract. Genetics and molecular biology. English. Germany.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: genome evolution; Brassicaceae
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 13/9/2011 09:06. -
MANDÁKOVÁ, Terezie, Simon JOLY, Martin KRZYWINSKI, Klaus MUMMENHOFF and Martin LYSÁK. Fast diploidization in close mesopolyploid relatives of Arabidopsis. Plant Cell. UNITED STATES: AMER SOC PLANT BIOLOGISTS, 2010, vol. 22, No 7, 14 pp. ISSN 1040-4651.
RIV/00216224:14310/10:00040640 Article in a journal. Genetics and molecular biology. English. United States of America.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Joly, Simon (124 Canada) -- Krzywinski, Martin (124 Canada) -- Mummenhoff, Klaus (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: CHROMOSOME-NUMBER REDUCTION; GENOME EVOLUTION; PHYLOGENETIC ANALYSIS; BRASSICACEAE; TELOMERE FUSION; ARABIDOPSIS; GENE; PLANTS; POLYPLOIDY
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 13/9/2011 09:07. -
LYSÁK, Martin and Terezie MANDÁKOVÁ. Genome duplication and reshuffling: an insight from crucifers. In Structural and Functional Diversity of the Eukaryotic Genome. 2010. ISBN 978-80-210-5285-7.
Name in Czech: Duplikace a reorganizace genomu: příklady z čeledi Brassicaceae
Name (in English): Genome duplication and reshuffling: an insight from crucifers
RIV/00216224:14310/10:00040687 Conference abstract. Genetics and molecular biology. English. Czech Republic.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution)
Keywords in English: genome evolution; Brassicaceae
Type of participation: requested lecture
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 13/9/2011 09:07. -
MANDÁKOVÁ, Terezie, Peter HEENAN and Martin LYSÁK. Island species radiation and karyotypic stasis in Pachycladon allopolyploids. BMC Evolutionary Biology. BioMed Central Ltd: London, 2010, vol. 2010, No 10, p. 367-380. ISSN 1471-2148.
Name in Czech: Ostrovní speciace a stabilita karyotypu u allopolyploidů rodu Pachycladon
RIV/00216224:14310/10:00040684 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Heenan, Peter (554 New Zealand) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: genome evolution; karyotype evolution; island speciation; Brassicaceae; comparative chromosome painting; polyploidy
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 13/9/2011 09:08. -
LYSÁK, Martin. Past and present patterns of plant genome evolution: an insight from crucifers. In 19th International Sympsium "Biodiversity and Evolutionary Biology" of the German Botanical Society (DBG). 2010.
Name in Czech: Minulé a současné způsoby evoluce genomu rostlin: brukvovité
Name (in English): Past and present patterns of plant genome evolution: an insight from crucifers
RIV/00216224:14310/10:00040685 Conference abstract. Genetics and molecular biology. English. Germany.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: genome evolution; Brassicaceae
Type of participation: requested lecture
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 13/9/2011 09:08. -
LYSÁK, Martin, Terezie MANDÁKOVÁ and Eric LACOMBE. Reciprocal and multi-species chromosome BAC painting in crucifers (Brassicaceae). Cytogenetic and Genome Research. Switzerland: Karger, 2010, vol. 129, 1-3, 6 pp. ISSN 1424-8581.
RIV/00216224:14310/10:00040641 Article in a journal. Genetics and molecular biology. English. Switzerland.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lacombe, Eric (250 France)
Keywords in English: Arabidopsis halleri; Arabidopsis thaliana; BAC FISH; Brassicaceae; Collinearity; Comparative chromosome painting; Plant cytogenetics
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 13/9/2011 09:09. -
DIERSCHKE, Tom, Terezie MANDÁKOVÁ, Martin LYSÁK and Klaus MUMMENHOFF. A bicontinental origin of polyploid Australian/New Zealand Lepidium species (Brassicaceae)? Evidence from genomic in situ hybridization. Annals of Botany. Oxford: Oxford University Press, 2009, vol. 104, No 4, p. 681-688. ISSN 0305-7364.
Name in Czech: Bikontinentální původ polyploidních australských a novozélandských druhů rodu Lepidium (Brassicaceae)
RIV/00216224:14310/09:00028752 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Dierschke, Tom (276 Germany) -- Mandáková, Terezie (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor) -- Mummenhoff, Klaus (276 Germany)
Keywords in English: Lepidium; Brassicaceae; FISH; GISH; hybridization; polyploidy; long-distance dispersal; ITS; rDNA; Australia; New Zealand
International impact: yes
Reviewed: yes
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 23/2/2010 09:16. -
LYSÁK, Martin. Comparative Cytogenetics of Wild Crucifers. In Biology and Breeding of Crucifers. USA: CRC Press, Taylor & Francis Group, 2009, p. 177-205. ISBN 978-1-4200-8608-9.
Name in Czech: Srovnavaci cytogenetika brukvovitych
RIV/00216224:14310/09:00028531 Chapter(s) of a specialized book. Genetics and molecular biology. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: Brassicaceae;
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 31/3/2010 09:18. -
AMBROŽOVÁ, Kateřina, Jiří MACAS, Pavel NEUMANN, Ilia J. LEITCH and Martin LYSÁK. Molecular and cytogenetic analysis of the biggest plant genomes. In Bulletin České společnosti experimentální biologie rostlin a Fyziologické sekce Slovenské botanické společnosti. 2009. ISSN 1213-6670.
Name in Czech: Molekulární a cytogenetická analýza největších rostlinných genomů
RIV/00216224:14310/09:00030022 Conference abstract. Genetics and molecular biology. English. Czech Republic.
Ambrožová, Kateřina (203 Czech Republic, belonging to the institution) -- Macas, Jiří (203 Czech Republic) -- Neumann, Pavel (203 Czech Republic) -- Leitch, Ilia J. (826 United Kingdom of Great Britain and Northern Ireland) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Fritillaria; repetitive elements; genomic analysis; genome size
Type of proceedings: pre-proceedings
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 28/4/2011 13:45. -
LYSÁK, Martin, Terezie MANDÁKOVÁ and Eric SCHRANZ. Polyploidy events and karyotype alterations in the genome evolution of crucifers (Brassicaceae). In 17th International Chromosome Conference. 2009. ISSN 0967-3849.
Name in Czech: Polyploidie a změny karyotypu v evoluci genomu brukvovitých (Brassicaceae)
RIV/00216224:14310/09:00028763 Conference abstract. Genetics and molecular biology. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Schranz, Eric (840 United States of America)
Keywords in English: Brassicaceae;genome evolution;karyotype evolution;polyploidy
Type of proceedings: pre-proceedings
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 28/4/2011 13:46. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Studium evoluce karyotypu v čeledi brukvovitých (Brassicaceae) metodou komparativního chromosomálního paintingu (Karyotype evolution in crucifers (Brassicaceae) studied by comparative chromosome painting). In Bulletin České společnosti experimentální biologie rostlin a Fyziologické sekce Slovenské botanické společnosti. 2009. ISSN 1213-6670.
Name (in English): Karyotype evolution in crucifers (Brassicaceae) studied by comparative chromosome painting
RIV/00216224:14310/09:00028785 Conference abstract. Genetics and molecular biology. Czech. Czech Republic.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Comparative chromosome painting; Brassicaceae; karyotype evolution; paleopolyploidy
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 28/4/2011 13:47. -
LYSÁK, Martin, Marcus A. KOCH, Jeremy M. BEAULIEU, Armin MEISTER and Ilia J. LIETCH. The dynamic ups and downs of genome size evolution in Brassicaceae. MOLECULAR BIOLOGY AND EVOLUTION. USA: OXFORD UNIV PRESS, 2009, vol. 26, No 1, p. 85-98. ISSN 0737-4038.
Name in Czech: Dynamicka evoluce genomu u brukvovitých (Brassicaceae)
RIV/00216224:14310/09:00028447 Article in a journal. Genetics and molecular biology. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor) -- Koch, Marcus A. (276 Germany) -- Beaulieu, Jeremy M. (840 United States of America) -- Meister, Armin (276 Germany) -- Lietch, Ilia J. (826 United Kingdom of Great Britain and Northern Ireland)
Keywords in English: Brassicaceae; Cruciferae; Arabidopsis; genome size evolution; chromosomes; phylogenetics; polyploidy
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 26/6/2009 10:53. -
DE JONG, Hans, Christiane KIEFER, Eric SCHRANZ, Terezie MANDÁKOVÁ, Martin LYSÁK and Marcus KOCH. The Nature Of Aberrant Chromosomes In Apomictic Boechera Accessions. In Plant & Animal Genomes XVII Conference. 2009.
Name in Czech: Původ aberantních chromosomů u apomictického rodu Boechera
RIV/00216224:14310/09:00028473 Conference abstract. Genetics and molecular biology. English. United States of America.
de Jong, Hans (528 Netherlands) -- Kiefer, Christiane (40 Austria) -- Schranz, Eric (840 United States of America) -- Mandáková, Terezie (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor) -- Koch, Marcus (40 Austria)
Keywords in English: Apomixis; chromosome evolution; genome painting; heterochromatic chromosome
Type of proceedings: pre-proceedings
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 9/4/2010 14:06. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Unraveling the mesopolyploid history of Australian crucifers (Brassicaceae). In Polyploidy, Hybridization and Biodiversity. 2009.
Name in Czech: Mesopolyploidie u australských endemických rostlin z čeledi brukvovitých (Brassicaceae)
RIV/00216224:14310/09:00028533 Conference abstract. Genetics and molecular biology. English. France.
Mandáková, Terezie (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: Polyploidy; Australian crucifers; comparative chromosome painting
Type of proceedings: pre-proceedings
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 9/4/2010 14:09. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Chromosomal phylogeny and karyotype evolution in x=7 crucifer species (Brassicaceae). Plant Cell. United States: AMER SOC PLANT BIOLOGISTS, 2008, vol. 20, October, p. 2559-2570. ISSN 1040-4651.
Name in Czech: Evoluce karyotypu u vybraných druhů s počtem chromosomů n=7 z čeledi brukvovitých (Brassicaceae)
RIV/00216224:14310/08:00024401 Article in a journal. Genetics and molecular biology. English. United States of America.
Mandáková, Terezie (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: Brassicaceae; comparative chromosome painting (CCP); karyotype evolution; chromosomal phylogeny
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 26/6/2009 10:56. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Karyotype Evolution in n=7 Species from Different Crucifer Tribes. In Brassica2008. 2008.
Name in Czech: Evoluce karyotypu u brukvovitých druhů se sedmi páry chromosomů (n=7)
RIV/00216224:14310/08:00027367 Conference abstract. Genetics and molecular biology. English. Norway.
Mandáková, Terezie (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: Brassicaceae; chromosome evolution; comparative chromosome painting; cytogenetics
Type of proceedings: pre-proceedings
International impact: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 9/4/2010 14:10. -
AMBROŽOVÁ, Kateřina, Jiří MACAS, Ilia J. LEITCH and Martin LYSÁK. Molecular analysis of repetitive elements in giant genomes of Fritillaria ( liliaceae). In The Comparative Biology of the Monocotyledons; Systematics and Evolution. 2008. ISBN 978-87-87772-03-7.
Name in Czech: Molekulární analýza repetitivních elementů u obřích genomů rodu Fritillaria L. (Liliaceae)
RIV/00216224:14310/08:00025178 Conference abstract. Genetics and molecular biology. English. Denmark.
Ambrožová, Kateřina (203 Czech Republic, belonging to the institution) -- Macas, Jiří (203 Czech Republic) -- Leitch, Ilia J. (826 United Kingdom of Great Britain and Northern Ireland) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Fritillaria; repetitive elements; genomic analysis; genome size
Type of proceedings: pre-proceedings
International impact: yes
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 28/4/2011 13:43. -
LYSÁK, Martin, Kwok CHEUNG, Michaela KITSCHKE and Petr BUREŠ. Ancestral Chromosomal Blocks Are Triplicated in Brassiceae Species with Varying Chromosome Number and Genome Size. Plant Physiology. USA: American Society of Plant Physiologists, 2007, vol. 145, No 2, p. 402-410. ISSN 0032-0889.URL
Name in Czech: Ancestral Chromosomal Blocks Are Triplicated in Brassiceae Species with Varying Chromosome Number and Genome Size
Name (in English): Ancestral Chromosomal Blocks Are Triplicated in Brassiceae Species with Varying Chromosome Number and Genome Size
RIV/00216224:14310/07:00019484 Article in a journal. Botany. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Cheung, Kwok (826 United Kingdom of Great Britain and Northern Ireland) -- Kitschke, Michaela (276 Germany) -- Bureš, Petr (203 Czech Republic, belonging to the institution)
Keywords in English: chromosomel painting; genome size; chromosomal evolution; paleopolyploidy
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Petr Bureš, Ph.D., učo 2635. Changed: 26/3/2019 20:15. -
BUREŠ, Petr, Petr ŠMARDA, Ivana HRALOVÁ, Sara FUENTES-SORIANO, Martin LYSÁK, Radomír ŘEPKA, Klára HELÁNOVÁ, Olga ROTREKLOVÁ, Jana PROCHÁZKOVÁ, Luboš ÚRADNÍČEK and Jana KŮROVÁ. Correlation between GC content ond genome size in plants. Cytometry. New York: International Society for Analytical Cyt, 2007, 71A, No 9, p. 764-764. ISSN 0196-4763.
Name in Czech: Korelace mezi velikostí genomu a obsahem GC bazí u rostlin
RIV/00216224:14310/07:00022487 Article in a journal. Botany. English. United States of America.
Bureš, Petr (203 Czech Republic, guarantor) -- Šmarda, Petr (203 Czech Republic) -- Hralová, Ivana (203 Czech Republic) -- Fuentes-Soriano, Sara (484 Mexico) -- Lysák, Martin (203 Czech Republic) -- Řepka, Radomír (203 Czech Republic) -- Helánová, Klára (203 Czech Republic) -- Rotreklová, Olga (203 Czech Republic) -- Procházková, Jana (203 Czech Republic) -- Úradníček, Luboš (203 Czech Republic) -- Kůrová, Jana (203 Czech Republic)
Keywords in English: flow cytometry; AT/GC genomic ratio; base composition
International impact: yes
Changed by: prof. RNDr. Petr Bureš, Ph.D., učo 2635. Changed: 25/6/2009 11:17. -
LYSÁK, Martin. Evolutionary and comparative cytogenetics of the Brassicaceae and Cleomaceae. In Plant Biology &Botany. 2007.URL
Name in Czech: Evoluční a srovnávací cytogenetika v čeledích Brassicaceae a Cleomaceae
RIV/00216224:14310/07:00019412 Conference abstract. Genetics and molecular biology. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: Brassicaceae; karyotype evolution; paleopolyploidy; comparative phylogenomics
Type of proceedings: pre-proceedings
International impact: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 9/4/2010 14:16. -
BUREŠ, Petr, Petr ŠMARDA, Ivana HRALOVÁ, Sara FUNES-SORIANO, Martin LYSÁK, Radomír ŘEPKA, Klára HELÁNOVÁ, Olga ROTREKLOVÁ, Jana PROCHÁZKOVÁ, Luboš ÚRADNÍČEK and Jana KŮROVÁ. GC Content in Plant Genomes. In Analytical Cytometry IV. Brno: Czech Society for Analytical Cytometry, 2007, p. 19-20. ISBN 978-80-239-9591-6.
Name in Czech: GCbsah v rostlinných genomech
RIV/00216224:14310/07:00022323 Proceedings paper. Botany. English. Czech Republic.
Bureš, Petr (203 Czech Republic, guarantor, belonging to the institution) -- Šmarda, Petr (203 Czech Republic, belonging to the institution) -- Hralová, Ivana (203 Czech Republic) -- Funes-Soriano, Sara (484 Mexico) -- Lysák, Martin (203 Czech Republic, belonging to the institution) -- Řepka, Radomír (203 Czech Republic) -- Helánová, Klára (203 Czech Republic, belonging to the institution) -- Rotreklová, Olga (203 Czech Republic, belonging to the institution) -- Procházková, Jana (203 Czech Republic) -- Úradníček, Luboš (203 Czech Republic) -- Kůrová, Jana (203 Czech Republic)
Keywords in English: Genome size; base composition; Carex; Eleocharis; Festuca; Apiaceae; Brassicaceae; Epilobium; Salix
Type of proceedings: pre-proceedings
International impact: yes
Changed by: prof. RNDr. Petr Bureš, Ph.D., učo 2635. Changed: 26/3/2019 22:01. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Karyotype evolution in n=7 species from different tribes of the mustard family (Brassicaceae). In Chromosome Research. 2007. ISSN 0967-3849.
Name in Czech: Evoluce karyotypu u druhů se sedmi chromosomy (n=7) z různých tribů čeledi brukvovitých (Brassicaceae)
RIV/00216224:14310/07:00019575 Conference abstract. Genetics and molecular biology. English. Netherlands.
Mandáková, Terezie (203 Czech Republic, belonging to the institution) -- Lysák, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: karyotype evolution; Brassicaceae
Type of proceedings: pre-proceedings
Type of participation: active participation (giving a lecture, organization, etc.)
International impact: yes
Reviewed: yes
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 28/4/2011 13:42. -
LYSÁK, Martin. New insights into comparative phylogenomics of crucifers (Brassicaceae). In Résumés des Communications Orales. 2007.
Name in Czech: Nové poznatky ve srovnávací fylogenomice brukvovitých (Brassicaceae).
RIV/00216224:14310/07:00019413 Conference abstract. Genetics and molecular biology. English. France.
Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: Brassicaceae; karyotype evolution; paleopolyploidy; comparative phylogenomics
International impact: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 9/4/2010 14:17. -
LYSÁK, Martin. Paleopolyploidy And Karyotype Evolution In Crucifers (Brassicaceae). In Plant &Animal Genome XV. 2007.
Name in Czech: Paleopolyploidie a evoluce karyotypu brukvovitých (Brassicaceae)
RIV/00216224:14310/07:00019411 Conference abstract. Genetics and molecular biology. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: Brassicaceae; karyotype evolution; paleopolyploidy; comparative phylogenomics
International impact: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 9/4/2010 14:17. -
FAY, Michael F., Ilia J. LEITCH, Jeremy M. BEAULIEU and Martin LYSÁK. Punctuated genome size evolution in Liliaceae. In Plant Biology & Botany. 2007.
Name in Czech: Evoluce velikosti genomu v čeledi Liliaceae
RIV/00216224:14310/07:00019628 Conference abstract. Genetics and molecular biology. English. United States of America.
Fay, Michael F. (826 United Kingdom of Great Britain and Northern Ireland) -- Leitch, Ilia J. (826 United Kingdom of Great Britain and Northern Ireland) -- Beaulieu, Jeremy M. (840 United States of America) -- Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: Liliaceae; evolution
Type of proceedings: pre-proceedings
International impact: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 9/4/2010 14:18. -
LEITCH, I.J., J.M. BEAULIEU, K. CHEUNG, L. HANSON, Martin LYSÁK and M.F. FAY. Punctuated genome size evolution in Liliaceae. J EVOLUTION BIOL. Oxon: BLACKWELL PUBLISHING, 2007, vol. 20, No 6, p. 2296-2308. ISSN 1010-061X.
Name in Czech: Evoluce velikosti genomu v čeledi Liliaceae
RIV/00216224:14310/07:00020809 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Leitch, I.J. (826 United Kingdom of Great Britain and Northern Ireland) -- Beaulieu, J.M. (826 United Kingdom of Great Britain and Northern Ireland) -- Cheung, K. (826 United Kingdom of Great Britain and Northern Ireland) -- Hanson, L. (826 United Kingdom of Great Britain and Northern Ireland) -- Lysák, Martin (203 Czech Republic, guarantor) -- Fay, M.F. (826 United Kingdom of Great Britain and Northern Ireland)
Keywords in English: C-value; evolution; evolutionary trends; Fritillaria; genome size; Liliaceae; punctuated evolution
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 30/6/2009 13:49. -
KOCH, Marcus A., Christoph DOBEŠ, Christiane KIEFER, Roswitha SCHMICKL, Leoš KLIMEŠ and Martin LYSÁK. Supernetwork identifies multiple events of plastid trnF(GAA) pseudogene evolution in the Brassicaceae. Mol. Biol. Evol. USA: Oxford Univ Press, 2007, vol. 24, No 1, p. 63-73. ISSN 0737-4038.
Name in Czech: Supernetwork slouží k identifikaci vícečetného vzniku plastidového trnF(GAA) pseudogenu v čeledi Brassicaceae
RIV/00216224:14310/07:00019410 Article in a journal. Genetics and molecular biology. English. United States of America.
Koch, Marcus A. (276 Germany) -- Dobeš, Christoph (276 Germany) -- Kiefer, Christiane (276 Germany) -- Schmickl, Roswitha (276 Germany) -- Klimeš, Leoš (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: Brassicaceae; plastome; pseudogene; evolution; trnF gene; supernetwork
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 30/6/2009 13:49. -
MANDÁKOVÁ, Terezie and Martin LYSÁK. Unexpected paleopolyploid evolution in Stenopetalum - a genus with the lowest chromosome numbers in the Brassicaceae. In Bulletin České společnosti experimentální biologie rostlin a Fyziologické sekce Slovenské botanické společnosti. Olomouc: Česká společnost experimentální biologie rostlin, 2007, p. 63-64. ISSN 1213-6670.
Name in Czech: Překvapivý polyploidní původ rodu Stenopetalum: rodu s nejnižšími chromosomovými čísly v čeledi brukvovitých (Brassicaceae)
Name (in English): Unexpected paleopolyploid evolution in Stenopetalum - a genus with the lowest chromosome numbers in the Brassicaceae
RIV/00216224:14310/07:00019576 Proceedings paper. Genetics and molecular biology. Czech. Czech Republic.
Mandáková, Terezie (203 Czech Republic) -- Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: paleopolyploid evolution in Stenopetalum; Brassicaceae
Type of proceedings: pre-proceedings
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 14/5/2009 11:28. -
LYSÁK, Martin and Terezie MANDÁKOVÁ. Unexpected paleopolyploid evolution in Stenopetalum - a genus with the lowest chromosome numbers in the Brassicaceae. In Chromosome Research. Netherlands: Springer, 2007, p. 11-12. ISSN 0967-3849.
Name in Czech: Překvapivý polyploidní původ rodu Stenopetalum: rodu s nejnižšími chromosomovými čísly v čeledi brukvovitých (Brassicaceae)
RIV/00216224:14310/07:00019574 Proceedings paper. Genetics and molecular biology. English. Netherlands.
Lysák, Martin (203 Czech Republic, guarantor) -- Mandáková, Terezie (203 Czech Republic)
Keywords in English: paleopolyploid evolution in Stenopetalum; Brassicaceae
Type of proceedings: pre-proceedings
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 30/6/2009 14:12. -
LYSÁK, Martin. Diving deeper into the crucifer genomes. In 15 Crucifer Genetics Workshop: Brassica 2006. 2006.
Name in Czech: Hlubší pohled do genomů brukvovitých
RIV/00216224:14310/06:00015498 Conference abstract. Genetics and molecular biology. English. Netherlands.
Lysák, Martin (203 Czech Republic, guarantor)
Keywords in English: crucifer genomes; Brassicaceae
Type of proceedings: pre-proceedings
International impact: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 9/4/2010 14:19. -
BERR, Alexander, Ales PECINKA, Armin MEISTER, Gregor KRETH, Jorg FUCHS, Frank R. BLATTNER, Martin LYSÁK and Ingo SCHUBERT. Chromosome arrangement and nuclear architecture but not centromeric sequences are conserved between Arabidopsis thaliana and Arabidopsis lyrata. The Plant Journal. England: BLACKWELL PUBLISHING, 2006, Neuveden, No 48, p. 771-783. ISSN 0960-7412.
Name in Czech: Organizace chromosomů a jaderná architektura jsou konzervovány u Arabidopsis thaliana and Arabidopsis lyrata, nikoliv centromerické repetice
RIV/00216224:14310/06:00015497 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Berr, Alexander (250 France) -- Pecinka, Ales (203 Czech Republic) -- Meister, Armin (276 Germany) -- Kreth, Gregor (276 Germany) -- Fuchs, Jorg (276 Germany) -- Blattner, Frank R. (276 Germany) -- Lysák, Martin (203 Czech Republic, guarantor) -- Schubert, Ingo (276 Germany)
Keywords in English: Arabidopsis lyrata; nuclear architecture; chromosome territories; karyotype evolution; chromosome painting
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 30/6/2009 13:49. -
SCHRANZ, Eric M., Martin LYSÁK and Thomas MITCHELL-OLDS. The ABC’s of comparative genomics in the Brassicaceae: building blocks of crucifer genomes. TRENDS in Plant Science. England: ELSEVIER SCIENCE LONDON, 2006, vol. 11, No 11, p. 535-542. ISSN 1360-1385.
Name in Czech: ABC komparativní genomiky brukvovitých (Brassicaceae): stavbní kameny genomu brukvovitých
RIV/00216224:14310/06:00015496 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Schranz, Eric M. (840 United States of America) -- Lysák, Martin (203 Czech Republic, guarantor) -- Mitchell-Olds, Thomas (840 United States of America)
Keywords in English: Brassicaceae
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Jiří Fajkus, CSc., učo 28574. Changed: 30/6/2009 13:49. -
LYSÁK, Martin, A. BERR, A. PECINKA, R. SCHMIDT, K. MCBREEN and I. SCHUBERT. Title: Mechanisms of chromosome number reduction in Arabidopsis thaliana and related Brassicaceae species. Proceedings of the National Academy of Sciences of the USA. Washington, 2006, vol. 103, No 13, p. 5224-5229, 5 pp. ISSN 0027-8424.
Name in Czech: Redukce počtu chromosomů u Arabidopsis thaliana a příbuzných druhů z čeledi Brassicaceae
Name (in English): Title: Mechanisms of chromosome number reduction in Arabidopsis thaliana and related Brassicaceae species
RIV/00216224:14310/06:00022312 Article in a journal. Genetics and molecular biology. English. United States of America.
Lysák, Martin (203 Czech Republic, guarantor) -- Berr, A. (250 France) -- Pecinka, A. (203 Czech Republic) -- Schmidt, R. (276 Germany) -- McBreen, K. (554 New Zealand) -- Schubert, I. (276 Germany)
Keywords in English: Brassicaceae; Arabidopsis; karyotype evolution; comparative cytogenetics; genome homeology; chromosome painting; genome colinearity
International impact: yes
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 15/7/2008 16:26. -
LYSÁK, Martin and Christian LEXER. Towards the era of comparative evolutionary genomics in Brassicaceae. Plant Systematics and Evolution. Wien: Springer-Verlag, 2006, vol. 259, 2-4, p. 175-198. ISSN 0378-2697.
Name in Czech: Éra srovnávací evoluční genomiky brukvovitých (Brassicaceae)
Name (in English): Towards the era of comparative evolutionary genomics in Brassicaceae
RIV/00216224:14310/06:00022311 Article in a journal. Genetics and molecular biology. English. Austria.
Lysák, Martin (203 Czech Republic, guarantor) -- Lexer, Christian (40 Austria)
Keywords in English: Brassicaceae; Arabidopsis; karyotype evolution; comparative cytogenetics and phylogenomics
International impact: yes
Changed by: prof. Mgr. Martin Lysák, Ph.D., DSc., učo 204166. Changed: 15/7/2008 16:22. -
SIROKY, Jiri, Martin LYSÁK, Jaroslav DOLEŽEL, Eduard KEJNOVSKÝ and Boris VYSKOT. Heterogeneity of rDNA distribution and genome size in Silene spp. Chromosome Research. Springer, 2001, vol. 9, p. 387-393. ISSN 0967-3849.
Name in Czech: Heterogeneita distribuce rDNA a velikost genomu u druhů rodu Silene
Genetics and molecular biology. English. Czech Republic.
Changed by: doc. RNDr. Eduard Kejnovský, CSc., učo 204182. Changed: 7/2/2008 11:05.
2024
2023
2022
2021
2020
2019
2018
2017
2016
2015
2014
2013
2012
2011
2010
2009
2008
2007
2006
2001
Displayed: 30/4/2024 21:42