Publication Records

SAKAMOTO, Tomoaki, Shuka IKEMATSU, Hokuto NAKAYAMA, Terezie MALÍK MANDÁKOVÁ, Gholamreza GOHARI, Takuya SAKAMOTO, Gaojie LI, Hongwei HOU, Sachihiro MATSUNAGA, Martin LYSÁK and Seisuke KIMURA. A chromosome-level genome assembly for the amphibious plant <i>Rorippa aquatica</i> reveals its allotetraploid origin and mechanisms of heterophylly upon submergence. Communications Biology. BERLIN: Nature Research, 2024, vol. 7, No 1, p. 1-14. ISSN 2399-3642. Available from: https://dx.doi.org/10.1038/s42003-024-06088-7.

MUCINA, Ladislav, Klaus MUMMENHOFF, Pieter WINTER, van Niekerk ADRIAAN, Terezie MALÍK MANDÁKOVÁ and Martin LYSÁK. Drought and life-history strategies in Heliophila (Brassicaceae). New Phytologist. HOBOKEN: Blackwell Science, 2024, vol. 241, No 2, p. 532-534. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.19352.

JEDLIČKOVÁ, Veronika, Marie ŠTEFKOVÁ, Terezie MALÍK MANDÁKOVÁ, Juan Francisco SANCHEZ LOPEZ, Marek SEDLÁČEK, Martin LYSÁK and Helene ROBERT BOISIVON. Injection-based hairy root induction and plant regeneration techniques in Brassicaceae. PLANT METHODS. LONDON: BIOMED CENTRAL LTD, 2024, vol. 20, No 1, p. 12, 1-12. ISSN 1746-4811. Available from: https://dx.doi.org/10.1186/s13007-024-01150-1.

MALÍK MANDÁKOVÁ, Terezie, Alice KRUMPOLCOVÁ, Roman MATYÁŠEK, Roman VOLKOV, Martin LYSÁK and Ales KOVARIK. Uniparental silencing of 5S rRNA genes in plant allopolyploids - insights from <i>Cardamine</i> (Brassicaceae). Plant Journal. Hoboken (USA): Wiley-Blackwell, 2024, vol. 119, No 3, p. 1313-1326. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.16850.

HAY, Nikolai M, Michael D WINDHAM, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Kasper P. HENDRIKS, Klaus MUMMENHOFF, Frederic LENS, Kathleen M. PRYER and C. Donovan BAILEY. A Hyb-Seq phylogeny of Boechera and related genera using a combination of Angiosperms353 and Brassicaceae-specific bait sets. American Journal of Botany. 1537-2197: Wiley, 2023, vol. 110, No 10, p. 1-20. ISSN 0002-9122. Available from: https://dx.doi.org/10.1002/ajb2.16226.

WLODZIMIERZ, Piotr, Fernando A RABANAL, Robin BURNS, Matthew NAISH, Elias PRIMETIS, Alison SCOTT, Terezie MALÍK MANDÁKOVÁ, Nicola GORRINGE, Andrew J TOCK, Daniel HOLLAND, Katrin FRITSCHI, Anette HABRING, Christa LANZ, Christie PATEL, Theresa SCHLEGEL, Maximilian COLLENBERG, Miriam MIELKE, Magnus NORDBORG, Fabrice ROUX, Gautam SHIRSEKAR, Carlos ALONSO-BLANCO, Martin LYSÁK, Polina Y NOVIKOVA, Alexandros BOUSIOS, Detlef WEIGEL and Ian R HENDERSON. Cycles of satellite and transposon evolution in <i>Arabidopsis</i> centromeres. Nature. BERLIN: NATURE PORTFOLIO, 2023, vol. 618, No 7965, p. 1-34. ISSN 0028-0836. Available from: https://dx.doi.org/10.1038/s41586-023-06062-z.

HENDRIKS, Kasper P, Christiane KIEFER, Ihsan A AL-SHEHBAZ, C Donovan BAILEY, van Huysduynen Alex HOOFT, Lachezar A NIKOLOV, Lars NAUHEIMER, Alexandre R ZUNTINI, Dmitry A GERMAN, Andreas FRANZKE, Marcus A KOCH, Martin LYSÁK, Oscar TORO-NUNEZ, Baris OZUDOGRU, Vanessa R INVERNON, Nora WALDEN, Olivier MAURIN, Nikolai M HAY, Philip SHUSHKOV, Terezie MALÍK MANDÁKOVÁ, M Eric SCHRANZ, Mats THULIN, Michael D WINDHAM, Ivana RESETNIK, Stanislav SPANIEL, Elfy LY, J Chris PIRES, Alex HARKESS, Barbara NEUFFER, Robert VOGT, Christian BRAUCHLER, Heimo RAINER, Steven B JANSSENS, Michaela SCHMULL, Alan FORREST, Alessia GUGGISBERG, Sue ZMARZTY, Brendan J LEPSCHI, Neville SCARLETT, Fred W STAUFFER, Ines SCHONBERGER, Peter HEENAN, William J BAKER, Felix FOREST, Klaus MUMMENHOFF and Frederic LENS. Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset. Current Biology. CAMBRIDGE: CELL PRESS, 2023, vol. 33, No 19, p. 4052-4075. ISSN 0960-9822. Available from: https://dx.doi.org/10.1016/j.cub.2023.08.026.

SLOVÁK, Marek, Andrea MELICHÁRKOVÁ, Eliška GBÚROVÁ ŠTUBŇOVÁ, Jaromír KUČERA, Terezie MALÍK MANDÁKOVÁ, Jan SMYČKA, Sébastien LAVERGNE, Nicodemo Giuseppe PASSALACQUA, Peter VĎAČNÝ and Ovidiu PAUN. Pervasive Introgression During Rapid Diversification of the European Mountain Genus Soldanella (L.) (Primulaceae). Systematic Biology. Oxford University Press, 2023, vol. 72, No 3, p. 491-504. ISSN 1063-5157. Available from: https://dx.doi.org/10.1093/sysbio/syac071.

HLAVATÁ, Kristýna, Jana LEONG-ŠKORNIČKOVÁ, Eliška ZÁVESKÁ, Otakar ŠÍDA, Mark NEWMAN, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Karol MARHOLD and Tomáš FÉR. Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods. Molecular Phylogenetics and Evolution. Elsevier, 2023, vol. 178, January, p. 1-14. ISSN 1055-7903. Available from: https://dx.doi.org/10.1016/j.ympev.2022.107666.

FARHAT, Perla, Terezie MALÍK MANDÁKOVÁ, Jan DIVÍŠEK, Hiroshi KUDOH, Dmitry A. GERMAN and Martin LYSÁK. The evolution of the hypotetraploid Catolobus pendulus genome – the poorly known sister species of Capsella. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2023, vol. 14, May, p. 1-17. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2023.1165140.

HUANG, Yile, Xinyi GUO, Kang ZHANG, Terezie MALÍK MANDÁKOVÁ, Feng CHENG and Martin LYSÁK. The meso-octoploid Heliophila variabilis genome sheds a new light on the impact of polyploidization and diploidization on the diversity of the Cape flora. Plant Journal. Wiley, 2023, vol. 116, No 2, p. 446-466. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.16383.

HUANG, Yile. The pathways of whole-genome duplications, diploidization, and descending dysploidy in the Biscutelleae (Brassicaceae). In ANANI, Hussein, Terezie MALÍK MANDÁKOVÁ, Xinyi GUO, Manuel PORETTI, Christian PARISOD and Martin LYSÁK. Polyploidy 2023. 2023.

AGERBIRK, Niels, David I. PATTISON, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Sabine MONTAUT and Dan STAERK. Ancient Biosyntheses in an Oil Crop: Glucosinolate Profiles in Limnanthes alba and Its Relatives (Limnanthaceae, Brassicales). Journal of Agricultural and Food Chemistry. American Chemical Society, 2022, vol. 70, No 4, p. 1134-1147. ISSN 0021-8561. Available from: https://dx.doi.org/10.1021/acs.jafc.1c07299.

MAU, Martin, Terezie MALÍK MANDÁKOVÁ, Xingliang MA, Jana EBERSBACH, Lifang ZOU, Martin LYSÁK and Timothy F SHARBEL. Evolution of an Apomixis-Specific Allele Class in Supernumerary Chromatin of Apomictic Boechera. Frontiers in Plant Science. Lausanne: FRONTIERS MEDIA SA, 2022, vol. 13, JUN, p. 890038-890054. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.890038.

OLSEN, Luka N, Marie K BRANDRUD, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Charlotte S BJORA, Eduardo CIRES, Inger NORDAL and Anne K BRYSTING. Genetic structure and evolution of diploid Cochlearia in Iceland. Botanical Journal of the Linnean society. OXFORD: The Linnean Society of London, 2022, vol. 200, No 3, p. 395-415. ISSN 0024-4074. Available from: https://dx.doi.org/10.1093/botlinnean/boac018.

ZUO, Sheng, Xinyi GUO, Terezie MALÍK MANDÁKOVÁ, Mark EDGINTON, Ihsan A AL-SHEHBAZ and Martin LYSÁK. Genome diploidization associates with cladogenesis, trait disparity, and plastid gene evolution. PLANT PHYSIOLOGY. UNITED STATES: OXFORD UNIV PRESS INC, 2022, vol. 190, No 1, p. 403-420. ISSN 0032-0889. Available from: https://dx.doi.org/10.1093/plphys/kiac268.

ZUO, Sheng, Terezie MALÍK MANDÁKOVÁ, Michaela KUBOVÁ and Martin LYSÁK. Genomes, repeatomes and interphase chromosome organization in the meadowfoam family (Limnanthaceae, Brassicales). PLANT JOURNAL. ENGLAND: WILEY, 2022, vol. 110, No 5, p. 1462-1475. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15750.

AL-SHEHBAZ, Ihsan A, Terezie MALÍK MANDÁKOVÁ, Klaus MUMMENHOFF and Martin LYSÁK. Heliophila verna (Brassicaceae), a new species from the Northern Cape of South Africa. Phytotaxa. ST LUKES, NEW ZEALAND: MAGNOLIA PRESS, 2022, vol. 555, No 2, p. 195-199. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.555.2.8.

BROCK, Jordan R., Terezie MALÍK MANDÁKOVÁ, Michael MCKAIN, Martin LYSÁK and Kenneth M. OLSEN. Chloroplast phylogenomics in Camelina (Brassicaceae) reveals multiple origins of polyploid species and the maternal lineage of C. sativa. Horticulture Research. Oxford University Press, 2022, vol. 9, January, p. 1-13. ISSN 2662-6810. Available from: https://dx.doi.org/10.1093/hr/uhab050.

DOGAN, Mert, Terezie MALÍK MANDÁKOVÁ, Xinyi GUO and Martin LYSÁK. Idahoa and Subularia: Hidden polyploid origins of two enigmatic genera of crucifers. American Journal of Botany. St Louis: Botanical Soc Amer Inc, 2022, vol. 109, No 8, p. 1273-1289. ISSN 0002-9122. Available from: https://dx.doi.org/10.1002/ajb2.16042.

RANDALL, Ricardo S, Claire JOURDAIN, Anna NOWICKA, Kateina KADUCHOVA, Michaela KUBOVÁ, Mohammad A AYOUB, Veit SCHUBERT, Christophe TATOUT, Isabelle COLAS, K. KALYANIKRISHNA, Sophie DESSET, Sarah MERMET, Aurelia BOULAFLOUS-STEVENS, Ivona KUBALOVA, Terezie MALÍK MANDÁKOVÁ, Stefan HECKMANN, Martin LYSÁK, Martina PANATTA, Raffaella SANTORO, Daniel SCHUBERT, Ales PECINKA, Devin ROUTH and Celia BAROUX. Image analysis workflows to reveal the spatial organization of cell nuclei and chromosomes. Nucleus. 2022, vol. 13, No 1, p. 277-299. ISSN 1949-1034. Available from: https://dx.doi.org/10.1080/19491034.2022.2144013.

STEIER, Julia E, Terezie MALÍK MANDÁKOVÁ, Martin F WOJCIECHOWSKI and Kelly P STEELE. Insights into Species Delimitation of Selected Species in the Flowering Plant Genus Medicago section Buceras (Leguminosae). SYSTEMATIC BOTANY. UNITED STATES: AMER SOC PLANT TAXONOMISTS, 2022, vol. 47, No 2, p. 431-440. ISSN 0363-6445. Available from: https://dx.doi.org/10.1600/036364422X16512564801533.

BARTHA, Laszlo, Terezie MALÍK MANDÁKOVÁ, Ales KOVARIK, Paul-Adrian BULZU, Nathalie RODDE, Vaclav MAHELKA, Martin LYSÁK, Margaux-Alison FUSTIER, Jan SAFAR, Petr CAPAL, Lujza KERESZTES and Horia L BANCIU. Intact ribosomal DNA arrays of Potentilla origin detected in Erythronium nucleus suggest recent eudicot-to-monocot horizontal transfer. New Phytologist. Blackwell Science, 2022, vol. 235, No 3, p. 1246-1259. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.18171.

WOS, Guillaume, Erwann ARC, Karl HUELBER, Veronika KONECNA, Adam KNOTEK, Doubravka POZAROVA, Clara BERTEL, Dominik KAPLENIG, Terezie MALÍK MANDÁKOVÁ, Gilbert NEUNER, Peter SCHOENSWETTER, Ilse KRANNER and Filip KOLAR. Parallel local adaptation to an alpine environment in Arabidopsis arenosa. Journal of Ecology. Wiley, 2022, vol. 110, No 10, p. 2448-2461. ISSN 0022-0477. Available from: https://dx.doi.org/10.1111/1365-2745.13961.

ERIKSSON, Mimmi C, Terezie MALÍK MANDÁKOVÁ, Jamie MCCANN, Eva M TEMSCH, Mark W CHASE, Mikael HEDREN, Hanna WEISS-SCHNEEWEISS and Ovidiu PAUN. Repeat Dynamics across Timescales: A Perspective from Sibling Allotetraploid Marsh Orchids (Dactylorhiza majalis s.l.). Molecular Biology and Evolution. Oxford: Oxford University Press, 2022, vol. 39, No 8, p. 1-15. ISSN 0737-4038. Available from: https://dx.doi.org/10.1093/molbev/msac167.

HUANG, Yile. Structure and evolution of the meso-octoploid genome of Heliophila variabilis (Brassicaceae). In MALÍK MANDÁKOVÁ, Terezie, Xinyi GUO and Martin LYSÁK. Congress of the European Society for Evolutionary Biology. 2022.

RU, Yalu, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK and Marcus A KOCH. The evolutionary history of Cardamine bulbifera shows a successful rapid postglacial Eurasian range expansion in the absence of sexual reproduction. Annals of Botany. Oxford: Oxford University Press, 2022, vol. 130, No 2, p. 245-263. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcac088.

MALÍK MANDÁKOVÁ, Terezie and Martin LYSÁK. The identification of the missing maternal genome of the allohexaploid camelina (Camelina sativa). Plant Journal. Hoboken (USA): Wiley-Blackwell, 2022, vol. 112, No 3, p. 622-629. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15931.

CHUMOVA, Zuzana, Alexander BELYAYEV, Terezie MALÍK MANDÁKOVÁ, Vojtech ZEISEK, Eva HODKOVA, Kristyna SEMBEROVA, Douglas EUSTON-BROWN and Pavel TRAVNICEK. The relationship between transposable elements and ecological niches in the Greater Cape Floristic Region: A study on the genus Pteronia (Asteraceae). Frontiers in Plant Science. Lausanne: FRONTIERS MEDIA SA, 2022, vol. 13, SEP, p. 982852-982869. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.982852.

LYSÁK, Martin, Mark EDGINTON, Sheng ZUO, Xinyi GUO, Terezie MALÍK MANDÁKOVÁ and Ihsan A AL-SHEHBAZ. Transfer of two Arabidella and two Cuphonotus species to the genus Lemphoria (Brassicaceae) and a description of the new species L. queenslandica. Phytotaxa. ST LUKES, NEW ZEALAND: MAGNOLIA PRESS, 2022, vol. 549, No 2, p. 235-240. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.549.2.9.

WATSON, J.M., J. TRIEB, M. TROESTL, K. RENFREW, Terezie MALÍK MANDÁKOVÁ, Jaroslav FULNEČEK, D.E. SHIPPEN and Karel ŘÍHA. A hypomorphic allele of telomerase uncovers the minimal functional length of telomeres in Arabidopsis. Genetics. BETHESDA (USA): GENETICS SOCIETY AMERICA, 2021, vol. 219, No 2, p. „iyab126“, 9 pp. ISSN 0016-6731. Available from: https://dx.doi.org/10.1093/genetics/iyab126.

ŠLENKER, Marek, Adam KANTOR, Karol MARHOLD, Roswitha SCHMICKL, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Marián PERNÝ, Michaela CABOŇOVÁ, Marek SLOVÁK and Judita ZOZOMOVÁ-LIHOVÁ. Allele Sorting as a Novel Approach to Resolving the Origin of Allotetraploids Using Hyb-Seq Data: A Case Study of the Balkan Mountain Endemic Cardamine barbaraeoides. Frontiers in Plant Science. Lausanne: Frontiers Media SA, 2021, vol. 12, April, p. "659275", 22 pp. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2021.659275.

DOGAN, Mert, Milan POUCH, Terezie MANDÁKOVÁ, Petra HLOUŠKOVÁ, Xinyi GUO, P. WINTER, Z. CHUMOVA, A. VAN NIEKERK, K. MUMMENHOFF, I.A. AL-SHEHBAZ, L. MUCINA and Martin LYSÁK. Evolution of Tandem Repeats Is Mirroring Post-polyploid Cladogenesis in Heliophila (Brassicaceae). Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2021, vol. 11, JAN, p. 607893-607910. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2020.607893.

HU, Q.J., Y.Z. MA, Terezie MALÍK MANDÁKOVÁ, S. SHI, C.L. CHEN, P.C. SUN, L. ZHANG, L.D. FENG, Y.D. ZHENG, X.Q. FENG, W.J. YANG, J.B. JIANG, T. LI, P.P. ZHOU, Q.S. YU, D.S. WAN, Martin LYSÁK, Z.X. XI, E. NEVO and J.Q. LIU. Genome evolution of the psammophyte Pugionium for desert adaptation and further speciation. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: NATL ACAD SCIENCES, 2021, vol. 118, No 42, p. „e2025711118“, 7 pp. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.2025711118.

MALÍK MANDÁKOVÁ, Terezie, K. ASHBY, B.J. PRICE, M.D. WINDHAM, J.G. CARMAN and Martin LYSÁK. Genome structure and apomixis in Phoenicaulis (Brassicaceae; Boechereae). Journal of Systematics and Evolution. Hoboken: Wiley, 2021, vol. 59, No 1, p. 83-92. ISSN 1674-4918. Available from: https://dx.doi.org/10.1111/jse.12555.

BAYAT, Soheila, Martin LYSÁK and Terezie MALÍK MANDÁKOVÁ. Genome structure and evolution in the cruciferous tribe Thlaspideae (Brassicaceae). Plant Journal. Hoboken: Wiley-Blackwell, 2021, vol. 108, No 6, p. 1768-1785. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15542.

BURNS, Robin, Terezie MALÍK MANDÁKOVÁ, Joanna GUNIS, Luz Mayela SOTO-JIMÉNEZ, Chang LIU, Martin LYSÁK, Polina Yu. NOVIKOVA and Magnus NORDBORG. Gradual evolution of allopolyploidy in Arabidopsis suecica. Nature Ecology & Evolution. Nature Research, 2021, vol. 5, No 10, p. 1367-1381, 29 pp. ISSN 2397-334X. Available from: https://dx.doi.org/10.1038/s41559-021-01525-w.

TRÁVNÍČEK, Pavel, Zuzana CHUMOVÁ, Eliška ZÁVESKÁ, Johana HANZLÍČKOVÁ, Lucie KUPKOVÁ, Jaromír KUČERA, Eliška GBÚROVÁ ŠTUBŇOVÁ, Ludmila REJLOVÁ, Terezie MALÍK MANDÁKOVÁ and Jan PONERT. Integrative Study of Genotypic and Phenotypic Diversity in the Eurasian Orchid Genus Neotinea. Frontiers in Plant Science. Lausanne: Frontiers Media SA, 2021, vol. 12, October, p. 1-18. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2021.734240.

GUO, Xinyi, Terezie MALÍK MANDÁKOVÁ, Karolína TRACHTOVÁ, B. OZUDOGRU, J.Q. LIU and Martin LYSÁK. Linked by Ancestral Bonds: Multiple Whole-Genome Duplications and Reticulate Evolution in a Brassicaceae Tribe. Molecular Biology and Evolution. OXFORD: OXFORD UNIV PRESS, 2021, vol. 38, No 5, p. 1695-1714. ISSN 0737-4038. Available from: https://dx.doi.org/10.1093/molbev/msaa327.

BOHUTINSKA, M., M. ALSTON, P. MONNAHAN, Terezie MALÍK MANDÁKOVÁ, S. BRAY, P. PAAJANEN, F. KOLAR and L. YANT. Novelty and Convergence in Adaptation to Whole Genome Duplication. Molecular Biology and Evolution. OXFORD: OXFORD UNIV PRESS, 2021, vol. 38, No 9, p. 3910-3924. ISSN 0737-4038. Available from: https://dx.doi.org/10.1093/molbev/msab096.

SHAN, Wenbo, Michaela KUBOVÁ, Terezie MALÍK MANDÁKOVÁ and Martin LYSÁK. Nuclear organization in crucifer genomes: nucleolus-associated telomere clustering is not a universal interphase configuration in Brassicaceae. Plant Journal. Hoboken: Wiley-Blackwell, 2021, vol. 108, No 2, p. 528-540. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15459.

CHUMOVA, Z., Terezie MALÍK MANDÁKOVÁ and P. TRAVNICEK. On the Origin of Tetraploid Vernal Grasses (Anthoxanthum) in Europe. Genes. BASEL: MDPI, 2021, vol. 12, No 7, p. 966-982. ISSN 2073-4425. Available from: https://dx.doi.org/10.3390/genes12070966.

WOS, G., M. BOHUTINSKA, J. NOSKOVA, Terezie MALÍK MANDÁKOVÁ and F. KOLAR. Parallelism in gene expression between foothill and alpine ecotypes in Arabidopsis arenosa. Plant Journal. Hoboken (USA): Wiley-Blackwell, 2021, vol. 105, No 5, p. 1211-1224. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15105.

CHUMOVA, Z., E. ZAVESKA, P. HLOUSKOVA, J. PONERT, P.A. SCHMIDT, M. CERTNER, Terezie MALÍK MANDÁKOVÁ and P. TRAVNICEK. Repeat proliferation and partial endoreplication jointly shape the patterns of genome size evolution in orchids. Plant Journal. Hoboken (USA): Wiley-Blackwell, 2021, vol. 107, No 2, p. 511-524. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15306.

HENDRIKS, K.P., Terezie MALÍK MANDÁKOVÁ, N.M. HAY, E. LY, A.H. VAN HUYSDUYNEN, R. TAMRAKAR, S.K. THOMAS, O. TORO-NUNEZ, J.C. PIRES, L.A. NIKOLOV, M.A. KOCH, M.D. WINDHAM, Martin LYSÁK, F. FOREST, K. MUMMENHOFF, W.J. BAKER, F. LENS and C.D. BAILEY. The best of both worlds: Combining lineage-specific and universal bait sets in target-enrichment hybridization reactions. Applications in Plant Sciences. HOBOKEN: Wiley, 2021, vol. 9, No 7, p. „e11438“, 12 pp. ISSN 2168-0450. Available from: https://dx.doi.org/10.1002/aps3.11438.

NAISH, M., M. ALONGE, P. WLODZIMIERZ, A.J. TOCK, B.W. ABRAMSON, A. SCHMUCKER, Terezie MALÍK MANDÁKOVÁ, B. JAMGE, C. LAMBING, P. KUO, N. YELINA, N. HARTWICK, K. COLT, L.M. SMITH, J. TON, T. KAKUTANI, R.A. MARTIENSSEN, K. SCHNEEBERGER, Martin LYSÁK, F. BERGER, A. BOUSIOS, T.P. MICHAEL, M.C. SCHATZ and I.R. HENDERSON. The genetic and epigenetic landscape of the Arabidopsis centromeres. Science. WASHINGTON: AMER ASSOC ADVANCEMENT SCIENCE, 2021, vol. 374, No 6569, p. "840"-"+", 88 pp. ISSN 0036-8075. Available from: https://dx.doi.org/10.1126/science.abi7489.

NOWAK, M.D., S. BIRKELAND, Terezie MANDÁKOVÁ, R.R. CHOUDHURY, Xinyi GUO, A.L.S. GUSTAFSSON, A. GIZAW, A. SCHRODER-NIELSEN, M. FRACASSETTI, A.K. BRYSTING, L. RIESEBERG, T. SLOTTE, C. PARISOD, Martin LYSÁK and C. BROCHMANN. The genome of Draba nivalis shows signatures of adaptation to the extreme environmental stresses of the Arctic. Molecular Ecology Resources. HOBOKEN: WILEY, 2021, vol. 21, No 3, p. 661-676. ISSN 1755-098X. Available from: https://dx.doi.org/10.1111/1755-0998.13280.

YANG, W.J., L. ZHANG, Terezie MANDÁKOVÁ, L. HUANG, T. LI, J.B. JIANG, Y.Z. YANG, Martin LYSÁK, J.Q. LIU and Q.J. HU. The chromosome-level genome sequence and karyotypic evolution of Megadenia pygmaea (Brassicaceae). Molecular Ecology Resources. HOBOKEN: WILEY, 2021, vol. 21, No 3, p. 871-879. ISSN 1755-098X. Available from: https://dx.doi.org/10.1111/1755-0998.13291.

MANDÁKOVÁ, Terezie, Petra HLOUŠKOVÁ, M.A. KOCH and Martin LYSÁK. Genome Evolution in Arabideae Was Marked by Frequent Centromere Repositioning. The Plant Cell. American Society of Plant Physiologists, 2020, vol. 32, No 3, p. 650-665. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.19.00557.

WALDEN, N., T.P. NGUYEN, Terezie MANDÁKOVÁ, Martin LYSÁK and M.E. SCHRANZ. Genomic Blocks in Aethionema arabicum Support Arabideae as Next Diverging Clade in Brassicaceae. Frontiers in Plant Science. 2020, vol. 11, JUN, p. 719-727. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2020.00719.

PEŠKA, Vratislav, Martin MÁTL, Terezie MANDÁKOVÁ, Daniel VITALES, Petr FAJKUS, Jiří FAJKUS and Sonia GARCIA. Human-like telomeres in Zostera marina reveal a mode of transition from the plant to the human telomeric sequences. Journal of Experimental Botany. Oxford: Oxford University Press, 2020, vol. 71, No 19, p. 5786-5793. ISSN 0022-0957. Available from: https://dx.doi.org/10.1093/jxb/eraa293.

MANDÁKOVÁ, Terezie, Petra HLOUŠKOVÁ, M.D. WINDHAM, T. MITCHELL-OLDS, K. ASHBY, B. PRICE, J. CARMAN and Martin LYSÁK. Chromosomal Evolution and Apomixis in the Cruciferous Tribe Boechereae. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2020, vol. 11, MAY, p. 514-530. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2020.00514.

SHAN, Wenbo, Terezie MANDÁKOVÁ and Martin LYSÁK. Interphase Chromosome Organization in the Brassicaceae. In CEITEC PhD Conference. 2020.

MOOD, J.D., M. ARDIYANI, T. VELDKAMP, Terezie MANDÁKOVÁ, L.M. PRINCE and H.J. BOER. Nomenclatural changes in Zingiberaceae: Haplochorema is reduced to Boesenbergia. Gardens' Bulletin Singapore. 2020, vol. 72, No 1, p. 77-95. ISSN 0374-7859. Available from: https://dx.doi.org/10.26492/gbs72(1).2020-08.

PENNER, Shira, Barak DROR, Iris AVIEZER, Yamit BAR-LEV, Ayelet SALMAN-MINKOV, Terezie MANDÁKOVÁ, Petr ŠMARDA, Itay MAYROSE and Yuval SAPIR. Phenology and polyploidy in annual Brachypodium species (Poaceae) along the aridity gradient in Israel. Journal of Systematics and Evolution. Hoboken: Wiley, 2020, vol. 58, No 2, p. 189-199. ISSN 1674-4918. Available from: https://dx.doi.org/10.1111/jse.12489.

MELICHARKOVA, Andrea, Marek SLENKER, Judita ZOZOMOVA-LIHOVA, Katarina SKOKANOVA, Barbora SINGLIAROVA, Tatiana KACMAROVA, Michaela CABONOVA, Matus KEMPA, GabrielaG SRAMKOVA, Terezie MANDÁKOVÁ, Martin LYSÁK, Marek SVITOK, Lenka MARTONFIOVA and Karol MARHOLD. So Closely Related and Yet So Different: Strong Contrasts Between the Evolutionary Histories of Species of the Cardamine pratensis Polyploid Complex in Central Europe. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2020, vol. 11, December 2020, p. 1-25. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2020.588856.

PONERT, J., Z. CHUMOVA, Terezie MANDÁKOVÁ and P. TRAVNICEK. A new species of Acianthera (Pleurothallidinae, Orchidaceae) from Brazil. Phytotaxa. ST LUKES, NEW ZEALAND: MAGNOLIA PRESS, 2019, vol. 402, No 1, p. 29-37. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.402.1.4.

BROCK, J.R., Terezie MANDÁKOVÁ, Martin LYSÁK and I.A. AL-SHEHBAZ. Camelina neglecta (Brassicaceae, Camelineae), a new diploid species from Europe. PHYTOKEYS. SOFIA: PENSOFT PUBL, 2019, JAN, No 115, p. 51-57. ISSN 1314-2011. Available from: https://dx.doi.org/10.3897/phytokeys.115.31704.

PEŠKA, Vratislav, Terezie MANDÁKOVÁ, Veronika IHRADSKÁ and Jiří FAJKUS. Comparative Dissection of Three Giant Genomes: Allium cepa, Allium sativum, and Allium ursinum. International Journal of Molecular Sciences. Basel: Multidisciplinary Digital Publishing Institute, 2019, vol. 20, No 3, p. 1-25. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms20030733.

FINKE, A., Terezie MANDÁKOVÁ, K. NAWAZ, G.T.H. VU, P. NOVÁK, Jiří MACAS, Martin LYSÁK and A. PECINKA. Genome invasion by a hypomethylated satellite repeat in Australian crucifer Ballantinia antipoda. Plant Journal. Oxford: Blackwell Publishing Ltd, 2019, vol. 99, No 6, p. 1066-1079. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.14380.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Healthy Roots and Leaves: Comparative Genome Structure of Horseradish and Watercress. Plant Physiology. ROCKVILLE: American Society of Plant Physiologists, 2019, vol. 179, No 1, p. 66-73. ISSN 0032-0889. Available from: https://dx.doi.org/10.1104/pp.18.01165.

MANDÁKOVÁ, Terezie, Milan POUCH, J.R. BROCK, I.A. AL-SHEHBAZ and Martin LYSÁK. Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2019, vol. 31, No 11, p. 2596-2612. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.19.00366.

MANDÁKOVÁ, Terezie, Xinyi GUO and Martin LYSÁK. Phylo-cytogenomic Analysis of Genome Duplications in Crucifers. In 1st Annual CEITEC Postdoc Retreat. 2019.

MACKOVÁ, Eliška, Jana ŘEPKOVÁ and Terezie MANDÁKOVÁ. Study of karyotype structure and evolution in the genus Trifolium (Fabaceae). In XX. Setkání biochemiků a molekulárních biologů. 2019. ISBN 978-80-210-9420-8.

HLOUŠKOVÁ, Petra, Terezie MANDÁKOVÁ, Milan POUCH, Pavel TRÁVNÍČEK and Martin LYSÁK. The large genome size variation in the Hesperis clade was shaped by the prevalent proliferation of DNA repeats and rarer genome downsizing. Annals of Botany. Oxford: Oxford University Press, 2019, vol. 124, No 1, p. 103-119. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcz036.

MANDÁKOVÁ, Terezie, J. ZOZOMOVA-LIHOVA, H. KUDOH, Y.P. ZHAO, Martin LYSÁK and K. MARHOLD. The story of promiscuous crucifers: origin and genome evolution of an invasive species, Cardamine occulta (Brassicaceae), and its relatives. Annals of Botany. Oxford: Oxford University Press, 2019, vol. 124, No 2, p. 209-220. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcz019.

MOOD, J.D., J.F. VELDKAMP, Terezie MANDÁKOVÁ, L.M. PRINCE and H.J. DE BOER. Three new species of Boesenbergia (Zingiberaceae) from Thailand and Lao P.D.R. Gardens' Bulletin Singapore. 2019, vol. 71, No 2, p. 477-498. ISSN 0374-7859. Available from: https://dx.doi.org/10.26492/gbs71(2).2019-15.

MANDÁKOVÁ, Terezie, Xinyi GUO, B. OZUDOGRU, K. MUMMENHOFF and Martin LYSÁK. Hybridization-facilitated genome merger and repeated chromosome fusion after 8 million years. Plant Journal. Oxford: Blackwell Publishing Ltd, 2018, vol. 96, No 4, p. 748-760. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.14065.

SHAN, Wenbo, Terezie MANDÁKOVÁ and Martin LYSÁK. Interphase chromosome organization and early meiotic chromosome pairing in Brassicaceae species. In 22nd International Chromosome Conference. 2018.

SLENKER, M., J. ZOZOMOVA-LIHOVA, Terezie MANDÁKOVÁ, H. KUDOH, Y.P. ZHAO, A. SOEJIMA, T. YAHARA, K. SKOKANOVA, S. SPANIEL and K. MARHOLD. Morphology and genome size of the widespread weed Cardamine occulta: how it differs from cleistogamic C. kokaiensis and other closely related taxa in Europe and Asia. Botanical Journal of the Linnean society. OXFORD: The Linnean Society of London, 2018, vol. 187, No 3, p. 456-482. ISSN 0024-4074. Available from: https://dx.doi.org/10.1093/botlinnean/boy030.

DOGAN, Mert, Milan POUCH, Petra HLOUŠKOVÁ, Terezie MANDÁKOVÁ and Martin LYSÁK. Phylogenetics and repeatome analysis of the southern African tribe Heliophileae. In 22nd International Chromosome Conference, 2018. 2018.

BAYAT, Soheila, Shokouh ESMAILBEGI KERMANI, Terezie MANDÁKOVÁ and Martin LYSÁK. Phylogeny and genome evolution in the tribe Thlaspideae (Brassicaceae). In 22nd International Chromosome Conference, 2018. 2018.

ESMAILBEGI KERMANI, Shokouh, I.A. AL-SHEHBAZ, Milan POUCH, Terezie MANDÁKOVÁ, K. MUMMENHOFF, M.R. RAHIMINEJAD, M. MIRTADZADINI and Martin LYSÁK. Phylogeny and systematics of the tribe Thlaspideae (Brassicaceae) and the recognition of two new genera. Taxon. Bratislava: International Assoc. for Plant Taxonomy, 2018, vol. 67, No 2, p. 324-340. ISSN 0040-0262. Available from: https://dx.doi.org/10.12705/672.4.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Post-polyploid diploidization and diversification through dysploid changes. CURRENT OPINION IN PLANT BIOLOGY. LONDON: CURRENT BIOLOGY LTD, 2018, vol. 42, APR, p. 55-65. ISSN 1369-5266. Available from: https://dx.doi.org/10.1016/j.pbi.2018.03.001.

PYSEK, P., H. SKALOVA, J. CUDA, W.Y. GUO, J. SUDA, J. DOLEZAL, O. KAUZAL, C. LAMBERTINI, M. LUCANOVA, Terezie MANDÁKOVÁ, L. MORAVCOVA, K. PYSKOVA, H. BRIX and L.A. MEYERSON. Small genome separates native and invasive populations in an ecologically important cosmopolitan grass. Ecology. HOBOKEN, NJ USA: WILEY, 2018, vol. 99, No 1, p. 79-90. ISSN 0012-9658. Available from: https://dx.doi.org/10.1002/ecy.2068.

KOBRLOVA, L., Terezie MANDÁKOVÁ and M. HRONES. Taxonomic status and typification of a neglected name Symphytum leonhardtianum from the Symphytum tuberosum complex (Boraginaceae). Phytotaxa. ST LUKES, NEW ZEALAND: MAGNOLIA PRESS, 2018, vol. 349, No 3, p. 225-236. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.349.3.3.

FILIAULT, D.L., ES BALLERINI, Terezie MANDÁKOVÁ, G. AKOZ, N.J. DERIEG, J. SCHMUTZ, J. JENKINS, J. GRIMWOOD, S.Q. SHU, R.D. HAYES, U. HELLSTEN, K. BARRY, J.Y. YAN, S. MIHALTCHEVA, M. KARAFIATOVA, V. NIZHYNSKA, E.M. KRAMER, Martin LYSÁK, S.A. HODGES and M. NORDBORG. The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history. elife. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD, 2018, vol. 7, OCT, p. 36426-36456. ISSN 2050-084X. Available from: https://dx.doi.org/10.7554/eLife.36426.

MANDÁKOVÁ, Terezie, Zheng LI, Michael S. BARKER and Martin LYSÁK. Diverse genome organization following 13 independent mesopolyploid events in Brassicaceae contrasts with convergent patterns of gene retention. Plant Journal. Hoboken (USA): Wiley-Blackwell, 2017, vol. 91, No 1, p. 3-21. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.13553.

RABANAL, Fernando A., Terezie MANDÁKOVÁ, Luz M. SOTO-JIMENEZ, Robert GREENHALGH, David L. PARROTT, Stefan LUTZMAYER, Joshua G. STEFFEN, Viktoria NIZHYNSKA, Richard MOTT, Martin LYSÁK, Richar M. CLARK and Magnus NORDBORG. Epistatic and allelic interactions control expression of ribosomal RNA gene clusters in Arabidopsis thaliana. GENOME BIOLOGY. LONDON: BIOMED CENTRAL LTD, 2017, vol. 18, May, p. nestránkováno, 15 pp. ISSN 1474-760X. Available from: https://dx.doi.org/10.1186/s13059-017-1209-z.

MANDÁKOVÁ, Terezie, Hjortur THORBJORNSSON, Rahul PISUPATI, Ilka REICHARDT, Martin LYSÁK and Kesara ANAMTHAWAT-JONSSON. Icelandic accession of Arabidopsis thaliana confirmed with cytogenetic markers and its origin inferred from whole-genome sequencing. ICELANDIC AGRICULTURAL SCIENCES. REYKJAVIK: RANNSOKNASTOFNUN LANDBUNADARINS, 2017, vol. 30, No 2017, p. 29-38. ISSN 1670-567X. Available from: https://dx.doi.org/10.16886/IAS.2017.03.

MANDÁKOVÁ, Terezie, Petra HLOUŠKOVÁ, Dmitry A. GERMAN and Martin LYSÁK. Monophyletic Origin and Evolution of the Largest Crucifer Genomes. Plant Physiology. Rockville (USA): American Society of Plant Physiologists, 2017, vol. 174, No 4, p. 2062-2071. ISSN 0032-0889. Available from: https://dx.doi.org/10.1104/pp.17.00457.

MANDÁKOVÁ, Terezie, Milan POUCH, Klára HARMANOVÁ, Itay MAYROSE, Shing Hei ZHAN and Martin LYSÁK. Multispeed genome diploidization and diversification after an ancient allopolyploidization. Molecular Ecology. Blackwell Science, 2017, vol. 26, No 22, p. 6445-6462. ISSN 0962-1083. Available from: https://dx.doi.org/10.1111/mec.14379.

CHUMOVA, Zuzana, Eliska ZAVESKA, Terezie MANDÁKOVÁ, Karol KRAK and Pavel TRAVNICEK. The Mediterranean: the cradle of Anthoxanthum (Poaceae) diploid diversity. Annals of Botany. Oxford: Oxford University Press, 2017, vol. 120, No 2, p. 285-302. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcx021.

RABANAL, Fernando A., Viktoria NIZHYNSKA, Terezie MANDÁKOVÁ, Polina Yu NOVIKOVA, Martin LYSÁK, Richard MOTT and Magnus NORDBORG. Unstable Inheritance of 45S rRNA Genes in Arabidopsis thaliana. G3-Genes, Genomes, Genetics. USA: Bethesda, 2017, vol. 7, No 4, p. 1201-1209. ISSN 2160-1836. Available from: https://dx.doi.org/10.1534/g3.117.040204.

LEE, Cheng-Ruei, Baosheng WANG, Julius P. MOJICA, Terezie MANDÁKOVÁ, Kasavajhala V. S. K. PRASAD, Jose Luis GOICOECHEA, Nadeesha PERERA, Uffe HELLSTEN, Hope N. HUNDLEY, Jenifer JOHNSON, Jane GRIMWOOD, Kerrie BARRY, Stephen FAIRCLOUGH, Jerry W. JENKINS, Yeisoo YU, Dave KUDRNA, Jianwei ZHANG, Jayson TALAG, Wolfgang GOLSER, Kathryn GHATTAS, M. Eric SCHRANZ, Rod WING, Martin LYSÁK, Jeremy SCHMUTZ, Daniel S. ROKHSAR and Thomas MITCHELL-OLDS. Young inversion with multiple linked QTLs under selection in a hybrid zone. Nature Ecology and Evolution. Nature Publishing Group, 2017, vol. 1, No 5, p. nestránkováno, 12 pp. ISSN 2397-334X. Available from: https://dx.doi.org/10.1038/s41559-017-0119.

CHUMOVA, Zuzana, Terezie MANDÁKOVÁ and Pavel TRAVNICEK. Are B-chromosomes responsible for the extraordinary genome size variation in selected Anthoxanthum annuals? Plant Systematics and Evolution. WIEN: Springer, 2016, vol. 302, No 6, p. 731-738. ISSN 0378-2697. Available from: https://dx.doi.org/10.1007/s00606-016-1295-5.

LYSÁK, Martin, Terezie MANDÁKOVÁ and M. Eric SCHRANZ. Comparative paleogenomics of crucifers: ancestral genomic blocks revisited. CURRENT OPINION IN PLANT BIOLOGY. LONDON: CURRENT BIOLOGY LTD, 2016, vol. 30, April, p. 108-115. ISSN 1369-5266. Available from: https://dx.doi.org/10.1016/j.pbi.2016.02.001.

KOLÁŘ, Filip, Magdalena LUČANOVÁ, Eliška ZÁVESKÁ, Gabriela FUXOVÁ, Terezie MANDÁKOVÁ, Stanislav ŠPANIEL, Dušan SENKO, Marek SVITOK, Martin KOLNÍK, Zigmantas GUDŽINSKAS and Karol MARHOLD. Ecological segregation does not drive the intricate parapatric distribution of diploid and tetraploid cytotypes of the Arabidopsis arenosa group (Brassicaceae). Biological Journal of the Linnean Society. Hoboken: Wiley-Blackwell, 2016, vol. 119, No 3, p. 673-688. ISSN 0024-4066. Available from: https://dx.doi.org/10.1111/bij.12479.

MANDÁKOVÁ, Terezie, Andrew D. GLOSS, Noah K. WHITEMAN and Martin LYSÁK. How diploidization turned a tetraploid into a pseudotriploid. American Journal of Botany. St Louis: Botanical Soc Amer Inc, 2016, vol. 103, No 7, p. 1187-1196. ISSN 0002-9122. Available from: https://dx.doi.org/10.3732/ajb.1500452.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Chromosome Preparation for Cytogenetic Analyses in Arabidopsis. Current protocols in plant biology. John Wiley & Sons, 2016, vol. 1, No 1, p. 43-51. ISSN 2379-8068. Available from: https://dx.doi.org/10.1002/cppb.20009.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Painting of Arabidopsis Chromosomes with Chromosome-Specific BAC Clones. Current protocols in plant biology. John Wiley & Sons, 2016, vol. 4, No 2, p. 359-371. ISSN 2379-8068. Available from: https://dx.doi.org/10.1002/cppb.20022.

GEISER, Celine, Terezie MANDÁKOVÁ, Nils ARRIGO, Martin LYSÁK and Christian PARISOD. Repeated Whole-Genome Duplication, Karyotype Reshuffling, and Biased Retention of Stress-Responding Genes in Buckler Mustard. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2016, vol. 28, No 1, p. 17-27. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.15.00791.

TAN, Ek Han, Isabelle M. HENRY, Maruthachalam RAVI, Keith R. BRADNAM, Terezie MANDÁKOVÁ, Mohan P. A. MURIMUTHU, Ian KORF, Martin LYSÁK, Luca COMAI and Simon W. L. CHAN. Catastrophic chromosomal restructuring during genome elimination in plants. eLife. Oxford: eLife Sciences Publications, 2015, vol. 4, may, p. "nestránkováno", 16 pp. ISSN 2050-084X. Available from: https://dx.doi.org/10.7554/eLife.06516.

CHUMOVÁ, Zuzana, Jana KREJČÍKOVÁ, Terezie MANDÁKOVÁ, Jan SUDA and Pavel TRÁVNÍČEK. Evolutionary and Taxonomic Implications of Variation in Nuclear Genome Size: Lesson from the Grass Genus Anthoxanthum (Poaceae). Plos one. San Francisco: Public Library of Science, 2015, vol. 10, No 7, p. "nestránkováno", 17 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0133748.

WILLING, Eva-Maria, Vimal RAWAT, Terezie MANDÁKOVÁ, Florian MAUMUS, Geo Velikkakam JAMES, Karl J. V. NORDSTROM, Claude BECKER, Norman WARTHMANN, Claudia CHICA, Bogna SZARZYNSKA, Matthias ZYTNICKI, Maria C. ALBANI, Christiane KIEFER, Sara BERGONZI, Loren CASTAINGS, Julieta L. MATEOS, Markus C. BERNS, Nora BUJDOSO, Thomas PIOFCZYK, Laura DE LORENZO, Cristina BARRERO-SICILIA, Isabel MATEOS, Mathieu PIEDNOEL, Joerg HAGMANN, Romy CHEN-MIN-TAO, Raquel IGLESIAS-FERNANDEZ, Stephan C. SCHUSTER, Carlos ALONSO-BLANCO, Francois ROUDIER, Pilar CARBONERO, Javier PAZ-ARES, Seth J. DAVIS, Aleš PEČINKA, Hadi QUESNEVILLE, Vincent COLOT, Martin LYSÁK, Detlef WEIGEL, George COUPLAND and Korbinian SCHNEEBERGER. Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation. NATURE PLANTS. LONDON: NATURE PUBLISHING GROUP, 2015, vol. 1, No 2, p. 1-7. ISSN 2055-026X. Available from: https://dx.doi.org/10.1038/NPLANTS.2014.23.

MANDÁKOVÁ, Terezie, Vasantika SINGH, Ute KRAMER and Martin LYSÁK. Genome Structure of the Heavy Metal Hyperaccumulator Noccaea caerulescens and Its Stability on Metalliferous and Nonmetalliferous Soils. Plant Physiology. Rockville (USA): American Society of Plant Physiologists, 2015, vol. 169, No 1, p. "674"-"+", 22 pp. ISSN 0032-0889. Available from: https://dx.doi.org/10.1104/pp.15.00619.

MANDÁKOVÁ, Terezie, M. Eric SCHRANZ, Timothy F. SHARBEL, Hans DE JONG and Martin LYSÁK. Karyotype evolution in apomictic Boechera and the origin of the aberrant chromosomes. Plant Journal. Hoboken (USA): Wiley-Blackwell, 2015, vol. 82, No 5, p. 785-793. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.12849.

CHENG, F., Martin LYSÁK, Terezie MANDÁKOVÁ and X. WANG. The Common Ancestral Genome of the Brassica Species. In Wang X. ; Kole CH. The Brassica rapa Genome. Německo: Springer Berlin Heidelberg, 2015, p. 97-105. Compendium of Plant Genomes. ISBN 978-3-662-47900-1. Available from: https://dx.doi.org/10.1007/978-3-662-47901-8_8.

KIEFER, Markus, Roswitha SCHMICKL, Dmitry A. GERMAN, Terezie MANDÁKOVÁ, Martin LYSÁK, Ihsan A. AL-SHEHBAZ, Andreas FRANZKE, Klaus MUMMENHOFF, Alexandros STAMATAKIS and Marcus A. KOCH. BrassiBase: Introduction to a Novel Knowledge Database on Brassicaceae Evolution. PLANT AND CELL PHYSIOLOGY. Oxford: Oxford University Press, 2014, vol. 55, No 1, p. "nestránkováno", 9 pp. ISSN 0032-0781. Available from: https://dx.doi.org/10.1093/pcp/pct158.

HAY, Angela S., Bjorn PIEPER, Elizabeth COOKE, Terezie MANDÁKOVÁ, Maria CARTOLANO, Alexander D. TATTERSALL, Raffaele D. IOIO, Simon J. MCGOWAN, Michalis BARKOULAS, Carla GALINHA, Madlen I. RAST, Hugo HOFHUIS, Christiane THEN, Jörg PLIESKE, Martin GANAL, Richard MOTT, Jaime F. MARTINEZ- GARCIA, Mark A. CARINE, Robert W. SCOTLAND, Xiangchao GAN, Dmitry A. FILATOV, Martin LYSÁK and Miltos TSIANTIS. Cardamine hirsuta: a versatile genetic system for comparative studies. The Plant Journal. Hoboken (USA): Blackwell Science, 2014, vol. 78, No 1, p. 1-15. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.12447.

MAJEROVÁ, Eva, Terezie MANDÁKOVÁ, GTH VU, Jiří FAJKUS, Martin LYSÁK and Miloslava FOJTOVÁ. Chromatin features of plant telomeric sequences at terminal vs. internal positions. Frontiers in Plant Science. LAUSANNE: Frontiers Research Foundation, 2014, vol. 5, November, p. "nestránkováno", 10 pp. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2014.00593.

ZOZOMOVÁ-LIHOVÁ, Judita, Karol KRAK, Terezie MANDÁKOVÁ, Kentaro K. SHIMIZU, Stanislav ŠPANIEL, Petr VÍT and Martin LYSÁK. Multiple hybridization events in Cardamine (Brassicaceae) during the last 150 years: revisiting a textbook example of neoallopolyploidy. Annals of Botany. Oxford: Oxford University Press, 2014, vol. 113, No 5, p. 817-830. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcu012.

MANDÁKOVÁ, Terezie, Karol MARHOLD and Martin LYSÁK. The widespread crucifer species Cardamine flexuosa is an allotetraploid with a conserved subgenomic structure. New Phytologist. Hoboken: WILEY-BLACKWELL, 2014, vol. 201, No 3, p. 982-992. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.12567.

ZOZOMOVÁ-LIHOVÁ, Judita, Terezie MANDÁKOVÁ, Alena KOVAŘÍKOVÁ, Andreas MÜHLHAUSEN, Klaus MUMMENHOFF, Martin LYSÁK and Aleš KOVAŘÍK. When fathers are instant losers: homogenization of rDNA loci in recently formed Cardamine X schulzii trigenomic allopolyploid. New Phytologist. Hoboken: WILEY-BLACKWELL, 2014, vol. 203, No 4, p. 1096-1108. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.12873.

HAUNDRY, Annabelle, Adrian E. PLATTS, Emilio VELLO, Douglas R. HOEN, Mickael LECLERCQ, Robert J. WILLIAMSON, Ewa FORCZEK, Zoé JOLY-LOPEZ, Joshua G. STEFFEN, Khaled M. HAZZOURI, Ken DEWAR, John R. STINCHCOMBE, Daniel J. SCHOEN, Xiaowu WANG, Jeremy SCHMUTZ, Christopher D. TOWN, Patrick P. EDGER, J. Chris PIRES, Karen S. SCHUMAKER, David E. JARVIS, Terezie MANDÁKOVÁ, Martin LYSÁK, Erik VAN DEN BERGH, M. Eric SCHRANZ, Paul M. HARRISON, Alan M. MOSES, Thomas E. BUREAU, Stephen I. WRIGHT and Mathieu BLANCHETTE. An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nature Genetics. New York: Nature Publishing Group, 2013, vol. 45, No 8, p. 891-"U228", 10 pp. ISSN 1061-4036. Available from: https://dx.doi.org/10.1038/ng.2684.

LYSÁK, Martin and Terezie MANDÁKOVÁ. Analysis of Plant Meiotic Chromosomes by Chromosome Painting. In Pawlowski Wojciech P.; Grelon Mathidle; Armstrong Susan. Plant Meiosis: Methods and Protocols. New York: Humana Press, 2013, p. 13-24. Part 1. ISBN 978-1-62703-332-9. Available from: https://dx.doi.org/10.1007/978-1-62703-333-6_2.

CHENG, Feng, Terezie MANDÁKOVÁ, Jian WU, Qi XIE, Martin LYSÁK and Xiaowu WANG. Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa. Plant Cell. AMER SOC PLANT BIOLOGISTS, 2013, vol. 25, No 5, p. 1541-1554. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.113.110486.

LONG, Quan, Fernando A. RABANAL, Dazhe MENG, Christian D. HUBER, Ashley FARLOW, Alexander PLATZER, Qingrun ZHANG, Bjarni J. VILHJÁLMSSON, Arthur KORTE, Viktoria NIZHYNSKA, Viktor VORONIN, Pamela KORTE, Laura SEDMAN, Terezie MANDÁKOVÁ, Martin LYSÁK, Uemit SEREN, Ines HELLMANN and Magnus NORDBORG. Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden. Nature Genetics. New York: Nature Publishing Group, 2013, vol. 45, No 8, p. 884-"U218", 8 pp. ISSN 1061-4036. Available from: https://dx.doi.org/10.1038/ng.2678.

SLOTTE, Tanja, Khaled M. HAZZOURI, J. Arvid AGREN, Daniel KOENIG, Florian MAUMUS, Ya-Long GUO, Kim STEIGE, Adrian E. PLATTS, Juan S. ESCOBAR, L. Killian NEWMAN, Wei WANG, Terezie MANDÁKOVÁ, Emilio VELLO, Lisa M. SMITH, Stefan R. HENZ, Joshua STEFFEN, Shohei TAKUNO, Yaniv BRANDVAIN, Graham COOP, Peter ANDOLFATTO, Tina T. HU, Mathieu BLANCHETTE, Richard M. CLARK, Hadi QUESNEVILLE, Magnus NORDBORG, Brandon S. GAUT, Martin LYSÁK, Jerry JENKINS, Jane GRIMWOOD, Jarrod CHAPMAN, Simon PROCHNIK, Shengqiang SHU, Daniel ROKHSAR, Jeremy SCHMUTZ, Detlef WEIGEL and Stephen I. WRIGHT. The Capsella rubella genome and the genomic consequences of rapid mating system evolution. Nature Genetics. New York: Nature Publishing Group, 2013, vol. 45, No 7, p. 831-"U165", 7 pp. ISSN 1061-4036. Available from: https://dx.doi.org/10.1038/ng.2669.

MANDÁKOVÁ, Terezie, Aleš KOVAŘÍK, Judita ZOZOMOVÁ-LIHOVÁ, Rie SHIMIZU-INATSUGI, Kentaro K. SHIMIZU, Klaus MUMMENHOFF, Karol MARHOLD and Martin LYSÁK. The More the Merrier: Recent Hybridization and Polyploidy in Cardamine. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2013, vol. 25, No 9, p. 3280-3295. ISSN 1040-4651. Available from: https://dx.doi.org/10.1105/tpc.113.114405.

MANDÁKOVÁ, Terezie, Klaus MUMMENHOFF, Ihsan A AL-SHEHBAZ, Ladislav MUCINA, Andreas MUEHLHAUSEE and Martin LYSÁK. Whole-genome triplication and species radiation in the southern African tribe Heliophileae (Brassicaceae). Taxon. Bratislava: International Assoc. for Plant Taxonomy, 2012, vol. 61, No 5, p. 989-1000. ISSN 0040-0262.

AMBROŽOVÁ, Kateřina, Terezie MANDÁKOVÁ, Petr BUREŠ, Pavel NEUMANN, Ilia J. LEITCH, Andrea KOBLÍŽKOVÁ, Jiří MACAS and Martin LYSÁK. Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies. Annals of Botany. Oxford: Oxford University Press, 2011, vol. 107, No 2, p. 255-268. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcq235.

MAJEROVÁ, Eva, Miloslava FOJTOVÁ, Terezie MANDÁKOVÁ and Jiří FAJKUS. Methylation of plant telomeric DNA: what do the results say? Plant Molecular Biology. Springer, 2011, vol. 77, No 6, p. 533-536. ISSN 0167-4412. Available from: https://dx.doi.org/10.1007/s11103-011-9834-5.

MANDÁKOVÁ, Terezie, Simon JOLY, Martin KRZYWINSKI, Klaus MUMMENHOFF and Martin LYSÁK. Fast diploidization in close mesopolyploid relatives of Arabidopsis. Plant Cell. UNITED STATES: AMER SOC PLANT BIOLOGISTS, 2010, vol. 22, No 7, 14 pp. ISSN 1040-4651.

LYSÁK, Martin and Terezie MANDÁKOVÁ. Genome duplication and reshuffling: an insight from crucifers. In Structural and Functional Diversity of the Eukaryotic Genome. 2010. ISBN 978-80-210-5285-7.

MANDÁKOVÁ, Terezie, Peter HEENAN and Martin LYSÁK. Island species radiation and karyotypic stasis in Pachycladon allopolyploids. BMC Evolutionary Biology. BioMed Central Ltd: London, 2010, vol. 2010, No 10, p. 367-380. ISSN 1471-2148.

LYSÁK, Martin, Terezie MANDÁKOVÁ and Eric LACOMBE. Reciprocal and multi-species chromosome BAC painting in crucifers (Brassicaceae). Cytogenetic and Genome Research. Switzerland: Karger, 2010, vol. 129, 1-3, 6 pp. ISSN 1424-8581.

DIERSCHKE, Tom, Terezie MANDÁKOVÁ, Martin LYSÁK and Klaus MUMMENHOFF. A bicontinental origin of polyploid Australian/New Zealand Lepidium species (Brassicaceae)? Evidence from genomic in situ hybridization. Annals of Botany. Oxford: Oxford University Press, 2009, vol. 104, No 4, p. 681-688. ISSN 0305-7364.

LYSÁK, Martin, Terezie MANDÁKOVÁ and Eric SCHRANZ. Polyploidy events and karyotype alterations in the genome evolution of crucifers (Brassicaceae). In 17th International Chromosome Conference. 2009. ISSN 0967-3849.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Studium evoluce karyotypu v čeledi brukvovitých (Brassicaceae) metodou komparativního chromosomálního paintingu (Karyotype evolution in crucifers (Brassicaceae) studied by comparative chromosome painting). In Bulletin České společnosti experimentální biologie rostlin a Fyziologické sekce Slovenské botanické společnosti. 2009. ISSN 1213-6670.

DE JONG, Hans, Christiane KIEFER, Eric SCHRANZ, Terezie MANDÁKOVÁ, Martin LYSÁK and Marcus KOCH. The Nature Of Aberrant Chromosomes In Apomictic Boechera Accessions. In Plant & Animal Genomes XVII Conference. 2009.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Unraveling the mesopolyploid history of Australian crucifers (Brassicaceae). In Polyploidy, Hybridization and Biodiversity. 2009.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Chromosomal phylogeny and karyotype evolution in x=7 crucifer species (Brassicaceae). Plant Cell. United States: AMER SOC PLANT BIOLOGISTS, 2008, vol. 20, October, p. 2559-2570. ISSN 1040-4651.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Karyotype Evolution in n=7 Species from Different Crucifer Tribes. In Brassica2008. 2008.

MANDÁKOVÁ, Terezie and Zuzana MÜNZBERGOVÁ. Morphometric and genetic differentiation of diploid and hexaploid populations of Aster amellus agg. in a contact zone. PLANT SYSTEMATICS AND EVOLUTION. Austria: Springer Wien, 2008, Neuveden, March, p. 155-170. ISSN 0378-2697.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Karyotype evolution in n=7 species from different tribes of the mustard family (Brassicaceae). In Chromosome Research. 2007. ISSN 0967-3849.

MANDÁKOVÁ, Terezie and Martin LYSÁK. Unexpected paleopolyploid evolution in Stenopetalum - a genus with the lowest chromosome numbers in the Brassicaceae. In Bulletin České společnosti experimentální biologie rostlin a Fyziologické sekce Slovenské botanické společnosti. Olomouc: Česká společnost experimentální biologie rostlin, 2007, p. 63-64. ISSN 1213-6670.

LYSÁK, Martin and Terezie MANDÁKOVÁ. Unexpected paleopolyploid evolution in Stenopetalum - a genus with the lowest chromosome numbers in the Brassicaceae. In Chromosome Research. Netherlands: Springer, 2007, p. 11-12. ISSN 0967-3849.