Masarykova univerzita

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Filtrování publikací

    2020

  1. VONDROVÁ, Lucie, Peter KOLESÁR, Marek ADAMUS, Matej NOCIAR, Antony William OLIVER a Jan PALEČEK. A role of the Nse4 kleisin and Nse1/Nse3 KITE subunits in the ATPase cycle of SMC5/6. Scientific reports. London: Nature Publishing Group, 2020, roč. 10, č. 1, s. 1-13. ISSN 2045-2322. doi:10.1038/s41598-020-66647-w.
  2. ADAMUS, Marek, Edit LELKES, David POTĚŠIL, Sri Ranjani GANJI, Peter KOLESÁR, Kateřina ZÁBRADY, Zbyněk ZDRÁHAL a Jan PALEČEK. Molecular insights into the architecture of the human SMC5/6 complex. Journal of Molecular Biology. London: Academic Press ltd-Elsevier Science ltd, 2020, roč. 432, č. 13, s. 3820-3837. ISSN 0022-2836. doi:10.1016/j.jmb.2020.04.024.
  3. BYŠKA, Jan, Adam JURČÍK, Katarína FURMANOVÁ, Barbora KOZLÍKOVÁ a Jan PALEČEK. Visual Analysis of Protein–Protein Interaction Docking Models Using COZOID Tool. In Stefan Canzar, Francisca Rojas Ringeling. Protein-Protein Interaction Networks. 1. vyd. New York, NY: Humana Press Inc, 2020. s. 81-94. Methods in Molecular Biology, vol. 2074. ISBN 978-1-4939-9872-2. doi:10.1007/978-1-4939-9873-9_7.
  4. 2019

  5. KOSZTYU, Pavlína, Iva SLANINOVÁ, Barbora VALČÍKOVÁ, Amandine VERLANDE, Petr MÜLLER, Jan PALEČEK a Stjepan ULDRIJAN. A Single Conserved Amino Acid Residue as a Critical Context-Specific Determinant of the Differential Ability of Mdm2 and MdmX RING Domains to Dimerize. Frontiers in Physiology. Lausanne: Frontiers Media, 2019, roč. 10, APR 9 2019, s. 1-14. ISSN 1664-042X. doi:10.3389/fphys.2019.00390.
  6. PALEČEK, Jan, Lucie VONDROVÁ, Kateřina ZÁBRADY a Jakub OTOČKA. Multicomponent Yeast Two-Hybrid System: Applications to Study Protein-Protein Interactions in SMC Complexes. In Badrinarayanan A. (eds). Methods in Molecular Biology. New York, NY: Springer Nature, 2019. s. 79-90. SMC Complexes, vol 2004. ISBN 978-1-4939-9519-6. doi:10.1007/978-1-4939-9520-2_7.
  7. PALEČEK, Jan. SMC5/6: Multifunctional Player in Replication. GENES. BASEL: MDPI AG, 2019, roč. 10, č. 1, s. 1-14. ISSN 2073-4425. doi:10.3390/genes10010007.
  8. 2018

  9. FURMANOVÁ, Katarína, Jan BYŠKA, Eduard M. GRÖLLER, Ivan VIOLA, Jan PALEČEK a Barbora KOZLÍKOVÁ. COZOID: COntact ZOne IDentifier for visual analysis of protein-protein interactions. BMC Bioinformatics. 2018, roč. 19, APR, s. 1-17. ISSN 1471-2105. doi:10.1186/s12859-018-2113-6.
  10. JURČIŠINOVÁ, Lenka, Jin WANG, Lucia MOLNÁROVÁ, Silvia BÁGEĽOVÁ POLÁKOVÁ, Juraj GREGÁŇ, Christian HAERING, Jiří FAJKUS a Jan PALEČEK. Genetic analysis of a relation between SMC5/6 and SAGA chromatin modifying complex. In XIX. setkání biochemiků a molekulárních biologů. 2018. ISBN 978-80-210-9069-9.
  11. JURČIŠINOVÁ, Lenka, Jin WANG, Lucia MOLNÁROVÁ, Silvia BÁGEĽOVÁ POLÁKOVÁ, Juraj GREGÁŇ, Christian HAERING, Jiří FAJKUS a Jan PALEČEK. Genetic analysis of a relation between SMC5/6 and SAGA chromatin modifying complex. In Genetická konferencia GSGM. 2018. ISBN 978-80-223-4545-3.
  12. 2017

  13. VONDROVÁ, Lucie, Kateřina ZÁBRADY, Stephan GRUBER, Marek ADAMUS, Lenka JURČIŠINOVÁ, Aaron ALT, Antony W OLIVER, Johanne M MURRAY, Alan R LEHMANN a Jan PALEČEK. Association of the Smc5/6 complex with chromatin is dependent on interaction of its KITE subunits with DNA. In SMC proteins: Chromosomal organizers from bacteria to human. 2017.
  14. ADAMUS, Marek, Kateřina ZÁBRADY, Lenka JURČIŠINOVÁ, Chunyan LIAO, Alan R. LEHMANN a Jan PALEČEK. Chromosomal association of the SMC5-6 complex is dependent on interaction of its Nse1-Nse3-Nse4 subcomplex with DNA. 2017.
  15. PALEČEK, Jan, Stephan GRUBER, Marek ADAMUS, Tomas KLUMPLER, Lucie VONDROVÁ, Katerina ZABRADY a Antony W OLIVER. KITE proteins: new insights to evolution and dynamics of SMC complexes. In 2nd meeting on SMC proteins: chromosomal organizers from bacteria to human. 2017.
  16. 2016

  17. VAN DER CRABBEN, Saskia, Marije HENNUS, Grant MCGREGOR, Deborah RITTER, Sandesh NAGAMANI, Owen WELLS, Magdalena HARAKALOVA, Ivan CHINN, Aaron ALT, Lucie VONDROVÁ, Ron HOCHSTENBACH, Joris VAN MONTFRANS, Suzanne TERHEGGEN-LAGRO, Stef VAN LIESHOUT, Markus VAN ROOSMALEN, Ivo RENKENS, Karen DURAN, Isaac NIJMAN, Wigard KLOOSTERMAN, Eric HENNEKAM, Jordan ORANGE, Peter VAN HASSELT, David WHEELER, Jan PALEČEK, Alan LEHMANN, Antony William OLIVER, Laurence PEARL, Sharon PLON, Johanne MURRAY a Gijs VAN HAAFTEN. Destabilized SMC5/6 complex leads to chromosome breakage syndrome with severe lung disease. Journal of Clinical Investigation. Ann Arbor: AMER SOC CLINICAL INVESTIGATION INC, 2016, roč. 126, č. 8, s. 2881-2892. ISSN 0021-9738. doi:10.1172/JCI82890.
  18. PALEČEK, Jan, Stephan GRUBER, Lucie VONDROVÁ, Marek ADAMUS, Kateřina ZÁBRADY, Lenka JURČIŠINOVÁ, Saskia N van der CRABBEN, Marije P HENNUS, Grant MCGREGOR, Deborah I RITTER, Alan R LEHMANN, Antony W OLIVER, Barbora KOZLÍKOVÁ, Sharon E PLON, Johanne M MURRAY a Gijs van HAAFTEN. Evolution and functions of SMC complexes: new SMC5/6 insights. In Central European Genome Stability and Damage Meeting. 2016.
  19. PALEČEK, Jan, Lucie VONDROVÁ, Marek ADAMUS, Kateřina ZÁBRADY, Lenka JURČIŠINOVÁ, Lucie BOZDĚCHOVÁ, Saskia N van der CRABBEN, Marije P HENNUS, Grant MCGREGOR, Deborah I RITTER, Alan R LEHMANN, Antony William OLIVER, Sharon E PLON, Johanne M MURRAY a Gijs van HAAFTEN. Evolution, functions and pathogenesis of the Nse3 (KITE) subunit of the SMC5/6 complex. In 7th DNA Repair Workshop. 2016.
  20. ZÁBRADY, Kateřina, Marek ADAMUS, Lucie VONDROVÁ, Chunyan LIAO, Hana SKOUPILOVÁ, Markéta NOVÁKOVÁ, Lenka JURČIŠINOVÁ, Aaron ALT, Antony W. OLIVER, Alan R. LEHMANN a Jan PALEČEK. Chromatin association of the SMC5/6 complex is dependent on binding of its NSE3 subunit to DNA. Nucleic Acids Research. Oxford: Oxford University Press, 2016, roč. 44, č. 3, s. 1064-1079. ISSN 0305-1048. doi:10.1093/nar/gkv1021.
  21. VONDROVÁ, Lucie, Matej FABIŠIK, Matej NOCIAR, Barbora KOZLÍKOVÁ a Jan PALEČEK. Mapping of Smc6-Nse3 and Smc6-Nse4 interactions within the S.pombe Smc5/6 complex. In Integrative modelling of biomolecular interactions. 2016.
  22. 2015

  23. PALEČEK, Emil, Ján TKÁČ, Martin BARTOŠÍK, Tomáš BERTÓK, Veronika OSTATNÁ a Jan PALEČEK. Electrochemistry of Nonconjugated Proteins and Glycoproteins. Toward Sensors for Biomedicine and Glycomics. Chemical Reviews. Washington D.C.: American Chemical Society, 2015, roč. 115, č. 5, s. 2045-2108. ISSN 0009-2665. doi:10.1021/cr500279h.
  24. VONDROVÁ, Lucie, Lucie KOZÁKOVÁ, Karel STEJSKAL, Panagoula CHARALABOUS, Peter KOLESÁR, Alan LEHMANN, Stjepan ULDRIJAN, Christopher M. SANDERSON, Zbyněk ZDRÁHAL a Jan PALEČEK. Evolution of the NSE1-NSE3-NSE4 subcomplex of the human SMC5/6 complex. In SMC proteins: Chromosomal organizers from bacteria to human. 2015.
  25. PALEČEK, Jan a Stephan GRUBER. Kite Proteins: a Superfamily of SMC/Kleisin Partners Conserved Across Bacteria, Archaea, and Eukaryotes. Structure. CAMBRIDGE: CELL PRESS, 2015, roč. 23, č. 12, s. 2183-2190. ISSN 0969-2126. doi:10.1016/j.str.2015.10.004.
  26. KOZÁKOVÁ, Lucie, Lucie VONDROVÁ, Karel STEJSKAL, Panagoula CHARALABOUS, Peter KOLESÁR, Alan R. LEHMANN, Stjepan ULDRIJAN, Christopher M. SANDERSON, Zbyněk ZDRÁHAL a Jan PALEČEK. The melanoma-associated antigen 1 (MAGEA1) protein stimulates the E3 ubiquitin-ligase activity of TRIM31 within a TRIM31-MAGEA1-NSE4 complex. Cell Cycle. Philadelphia: Taylor&Francis Inc, 2015, roč. 14, č. 6, s. 920-930. ISSN 1538-4101. doi:10.1080/15384101.2014.1000112.
  27. 2014

  28. PALEČEK, Jan, Kateřina BEDNÁŘOVÁ, Hana SKOUPILOVÁ, Lenka JURČIŠINOVÁ, Lucie VONDROVÁ, Peter KOLESÁR, Markéta NOVÁKOVÁ, Chunyan LIAO, Aaron ALT, Antony OLIVER, Hung QUANG-DANG, Johanne MURRAY a Alan LEHMANN. DNA binding ability of the Nse1-Nse3-Nse4 sub-complex of the SMC5/6 complex is essential in fission yeast. In Yeast Chromosome Structure, Replication and Segregation. 2014.
  29. ZÁBRADY, Kateřina, Marek ADAMUS, Hana SKOUPILOVÁ, Lenka JURČIŠINOVÁ, Chunyan LIAO, Alan R. LEHMANN a Jan PALEČEK. Chromosomal association of the SMC5-6 complex is dependent on interaction of its Nse1-Nse3-Nse4 subcomplex with DNA. In Annual Conference Brno 2014: Frontiers in Material and Life Sciences. 2014.
  30. 2013

  31. BEDNÁŘOVÁ, Kateřina, Lucie VONDROVÁ, Markéta NOVÁKOVÁ, Hana SKOUPILOVÁ, Chunian LIAO, Aron ALT, Antony OLIVER, Zdeněk KŘÍŽ, Johanne M. MURRAY, Alan LEHMANN a Jan PALEČEK. DNA binding ability of the Nse1-Nse3-Nse4 sub-complex is critical for essential function of the SMC5-6 complex. In Chromatin, Replication and Chromosomal Stability 2013. 2013.
  32. KOZÁKOVÁ, Lucie, Kateřina BEDNÁŘOVÁ, Jessica HUDSON, Marc GUÉRINEAU, Alan LEHMANN a Jan PALEČEK. Evolution and function of non-SMC subunits of SMC5/6 complex. In The 19th International chromosome conference. 2013.
  33. 2012

  34. GUÉRINEAU, Marc, Zdeněk KŘÍŽ, Lucie KOZÁKOVÁ, Kateřina BEDNÁŘOVÁ, Pavel JANOŠ a Jan PALEČEK. Analysis of the Nse3/MAGE-binding Domain of the Nse4/EID Family Proteins. PLoS One. San Francisco: Public Library of Science, 2012, roč. 7, č. 4, s. "nestránkováno", 10 s. ISSN 1932-6203. doi:10.1371/journal.pone.0035813.
  35. KOZÁKOVÁ, Lucie, Jessica HUDSON, Kateřina BEDNÁŘOVÁ, Marc GUÉRINEAU a Jan PALEČEK. MAGE proteiny jako kofaktory buněčných procesů. In XII. mezioborové setkání mladých biologů, biochemiků a chemiků z Čech a SLovenska. 2012. ISSN 0009-2770.
  36. 2011

  37. GUÉRINEAU, Marc, Zdeněk KŘÍŽ, Lucie KOZÁKOVÁ, Kateřina BEDNÁŘOVÁ, Sreenivas Reddy BATHULA, Jessica HUDSON, R. Alan LEHMANN a Jan PALEČEK. CHARACTERIZATION OF THE NSE4/EID BINDING TO NSE3/MAGE PROTEINS. In XV. Setkání biochemiků a molekulárních biologů. 2011.
  38. HUDSON, J J R, Kateřina BEDNÁŘOVÁ, Lucie KOZÁKOVÁ, Chunyan LIAO, Marc GUÉRINEAU, Rita COLNAGHI, Susanne VIDOT, Jaromír MAREK, Sreenivas Reddy BATHULA, Alan LEHMANN a Jan PALEČEK. Interactions between the Nse3 and Nse4 Components of the SMC5-6 Complex Identify Evolutionarily Conserved Interactions between MAGE and EID Families. PloS ONE. San Francisco: Public Library of Science, 2011, roč. 6, č. 2, s. "nestránkováno", 14 s. ISSN 1932-6203. doi:10.1371/journal.pone.0017270.
  39. 2010

  40. KOZÁKOVÁ, Lucie, Kateřina BEDNÁŘOVÁ, Jessica HUDSON, Marc GUÉRINEAU, Chunyan LIAO, Rita COLNAGHI, Jaromír MAREK, Susanne VIDOT, Alan LEHMANN a Jan PALEČEK. The MAGE and EID proteins affect transcription regulation of target genes. In 9 th EMBL conference Transcription and chromatin. 2010.
  41. PALEČEK, Jan, Kateřina BEDNÁŘOVÁ, Jessica HUDSON, Lucie KOZÁKOVÁ, Marc GUÉRINEAU, Chunyan LIAO, Rita COLNAGHI, Jaromír MAREK, Susanne VIDOT a Alan LEHMANN. The Nse3/MAGE and Nse4/EID proteins are involved in transcription regulation. In 75th Cold Spring Harbor Symposium on Qunatitative Biology: Nuclear organization and function. 2010.
  42. BEDNÁŘOVÁ, Kateřina, Jessica HUDSON, Lucie KOZÁKOVÁ, Marc GUÉRINEAU, Jaromír MAREK, Alan R. LEHMANN a Jan PALEČEK. The NSE3/MAGE interactions with NSE4/EID proteins are evolutionarily conserved. In KOZÁKOVÁ, Lucie, Marc GUÉRINEAU, Jaromír MAREK, Alan R. LEHMAN a Jan PALEČEK. XIV. Setkání biochemiků a molekulárních biologů. 2010.
  43. 2009

  44. PALEČEK, Jan. Architecture and activities of Structure Maintenance of Chromosome SMC5/6 complex. 2009.
  45. BATHULA, Sreenivas Reddy, Jan PALEČEK, Lukáš ŽÍDEK a Vladimír SKLENÁŘ. MAGE (melanoma-associated antigen) Domain structural studies using NMR. In Central European NMR Meeting, Valtice, CR. 2009.
  46. 2008

  47. PROCHÁZKOVÁ SCHRUMPFOVÁ, Petra, Iva MOZGOVÁ, Milan KUCHAŘ, Jan PALEČEK a Jiří FAJKUS. Alternative telomere lengthening in development of normal and telomerase knock-out plants. In 4th European workshop on: Role of Telomeres and Telomerase in Cancer and Aging. 2008.
  48. PROCHÁZKOVÁ SCHRUMPFOVÁ, Petra, Iva MOZGOVÁ, Milan KUCHAŘ, Jan PALEČEK a Jiří FAJKUS. Analysis of interaction domains of plant telomere-binding proteins AtTRB1 and AtPOT1b. In 4th European workshop on: Role of Telomeres and Telomerase in Cancer and Aging. 2008.
  49. PROCHÁZKOVÁ SCHRUMPFOVÁ, Petra, Milan KUCHAŘ, Jan PALEČEK a Jiří FAJKUS. Mapping of interaction domains of putative telomere-binding proteins AtTRB1 and AtPOT1b from Arabidopsis thaliana. FEBS LETT. Netherlands: Elsevier Science BV, 2008, roč. 582, č. 10, s. 1400-1406. ISSN 0014-5793.
  50. 2007

  51. KUCHAŘ, Milan, Petra SCHRUMPFOVÁ, Iva ŠANTRŮČKOVÁ, Jan PALEČEK, Ctirad HOFR a Jiří FAJKUS. Mapping of interaction domains of putative plant telomere preteins. In Plant DNA Repair & Recombination. 2007.
  52. 2006

  53. PALEČEK, Jan, Susanne VIDOT, Min FENG, Aidan DOHERTY a Alan LEHMANN. The Smc5-Smc6 DNA Repair Complex: Bridging of the SMC5-SMC6 heads by the kleisin, Nse4 ... Journal of Biological Chemistry. 2006, roč. 281, č. 48, s. 36952-9.
  54. 2005

  55. SERGEANT, John, Elaine TAYLOR, Jan PALECEK, Maria FOUSTERI, Sara SWEENEY, Hideo SHINAGAWA, Felicity WATTS a Alan LEHMANN. Composition and architecture of the Schizosaccharomyces pombe Rad18 (Smc5-6) complex. Molecular and Cellular Biology. 2005, roč. 25, s. 172-84. ISSN 0270-7306.
  56. ANDREWS, Emily, Jan PALECEK, John SERGEANT, Elaine TAYLOR, Felicity WATTS a Alan LEHMANN. Nse2, a component of the Smc5-6 complex, is a SUMO ligase required for the response to DNA damage. Molecular and Cellular Biology. 2005, roč. 25, s. 185-96. ISSN 0270-7306.
  57. 2004

  58. FOJTA, Miroslav, Hana PIVOŇKOVÁ, Marie BRÁZDOVÁ, K NEMCOVA, Jan PALEČEK a Bořivoj VOJTĚŠEK. Investigations of the supercoil-selective DNA binding of wild type p53 suggest a novel mechanism for controlling p53 function. European Journal of Biochemistry. 2004, roč. 271, č. 19, s. 3865-3876. ISSN 0014-2956.
  59. 2002

  60. BRÁZDOVÁ, Marie, Jan PALEČEK, D.I. CHERNY, Sabina BILLOVÁ, Miroslav FOJTA, Petr PEČINKA, Bořivoj VOJTĚŠEK, T.M. JOVIN a Emil PALEČEK. Role of tumor suppressor p53 domains in selective binding to supercoiled DNA. Nucleic Acids Research. 2002, roč. 30, s. 4966-4974.
  61. 2001

  62. PALEČEK, Emil, Marie BRÁZDOVÁ, Václav BRÁZDA, Jan PALEČEK, Sabina BILLOVÁ, V SUBRAMANIAM a T M JOVIN. Binding of p53 and its core domain to supercoiled DNA. European Journal of Biochemistry. 2001, roč. 268, č. 3, s. 573-581. ISSN 0014-2956.
  63. PALEČEK, Jan, J HASEK a H RUIS. Rpg1p/Tif32p, a subunit of translation initiation factor 3, interacts with actin-associated protein Sla2p. Biochemical and biophysical research communications. 2001, roč. 282, č. 5, s. 1244-1250. ISSN 0006-291X.
  64. 2000

  65. BRÁZDA, Václav, Jan PALEČEK, Šárka POSPÍŠILOVÁ, Bořivoj VOJTĚŠEK a Emil PALEČEK. Specific modulation of p53 binding to consensus sequence within supercoiled DNA by monoclonal antibodies. Biochemical and biophysical research communications. 2000, roč. 267, č. 3, s. 934-939. ISSN 0006-291X.
  66. 1997

  67. WESP, A, L HICKE, Jan PALEČEK, R LOMBARDI, Tina HAUSTEIN, A L MUNN a H RIEZMAN. End4p/Sla2p interacts with actin-associated proteins for endocytosis in Saccharomyces cerevisiae. Molecular Biology of the Cell. 1997, roč. 8, č. 11, s. 2291-2306. ISSN 1059-1524.
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