Masarykova univerzita

Výpis publikací

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Filtrování publikací

    2021

  1. DOGAN, Mert, Milan POUCH, Terezie MANDÁKOVÁ, Petra HLOUŠKOVÁ, Xinyi GUO, P. WINTER, Z. CHUMOVA, A. VAN NIEKERK, K. MUMMENHOFF, I.A. AL-SHEHBAZ, L. MUCINA a Martin LYSÁK. Evolution of Tandem Repeats Is Mirroring Post-polyploid Cladogenesis in Heliophila (Brassicaceae). Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2021, roč. 11, JAN, s. 607893-607910. ISSN 1664-462X. doi:10.3389/fpls.2020.607893.
  2. MAYROSE, I. a Martin LYSÁK. The Evolution of Chromosome Numbers: Mechanistic Models and Experimental Approaches. GENOME BIOLOGY AND EVOLUTION. Oxford University Press, 2021, roč. 13, č. 2, s. 1-15. ISSN 1759-6653. doi:10.1093/gbe/evaa220.
  3. NOWAK, M.D., S. BIRKELAND, Terezie MANDÁKOVÁ, R.R. CHOUDHURY, Xinyi GUO, A.L.S. GUSTAFSSON, A. GIZAW, A SCHRODER-NIELSEN, M. FRACASSETTI, A.K. BRYSTING, L. RIESEBERG, T. SLOTTE, C. PARISOD, Martin LYSÁK a C BROCHMANN. The genome of Draba nivalis shows signatures of adaptation to the extreme environmental stresses of the Arctic. Molecular Ecology Resources. HOBOKEN: WILEY, 2021, 16 s. ISSN 1755-098X. doi:10.1111/1755-0998.13280.
  4. YANG, W.J., L. ZHANG, Terezie MANDÁKOVÁ, L. HUANG, T. LI, J.B. JIANG, Y.Z. YANG, Martin LYSÁK, J.Q. LIU a Q.J. HU. The chromosome-level genome sequence and karyotypic evolution of Megadenia pygmaea (Brassicaceae). Molecular Ecology Resources. HOBOKEN: WILEY, 2021, 9 s. ISSN 1755-098X. doi:10.1111/1755-0998.13291.
  5. 2020

  6. MANDÁKOVÁ, Terezie, Petra HLOUŠKOVÁ, M.A. KOCH a Martin LYSÁK. Genome Evolution in Arabideae Was Marked by Frequent Centromere Repositioning. The Plant Cell. American Society of Plant Physiologists, 2020, roč. 32, č. 3, s. 650-665. ISSN 1040-4651. doi:10.1105/tpc.19.00557.
  7. WALDEN, N., T.P. NGUYEN, Terezie MANDÁKOVÁ, Martin LYSÁK a M.E. SCHRANZ. Genomic Blocks in Aethionema arabicum Support Arabideae as Next Diverging Clade in Brassicaceae. Frontiers in Plant Science. 2020, roč. 11, JUN, s. 719-727. ISSN 1664-462X. doi:10.3389/fpls.2020.00719.
  8. MANDÁKOVÁ, Terezie, Petra HLOUŠKOVÁ, M.D. WINDHAM, T. MITCHELL-OLDS, K. ASHBY, B. PRICE, J. CARMAN a Martin LYSÁK. Chromosomal Evolution and Apomixis in the Cruciferous Tribe Boechereae. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2020, roč. 11, MAY, s. 514-530. ISSN 1664-462X. doi:10.3389/fpls.2020.00514.
  9. SHAN, Wenbo, Terezie MANDÁKOVÁ a Martin LYSÁK. Interphase Chromosome Organization in the Brassicaceae. In CEITEC PhD Conference. 2020.
  10. MELICHARKOVA, Andrea, Marek SLENKER, Judita ZOZOMOVA-LIHOVA, Katarina SKOKANOVA, Barbora SINGLIAROVA, Tatiana KACMAROVA, Michaela CABONOVA, Matus KEMPA, GabrielaG SRAMKOVA, Terezie MANDÁKOVÁ, Martin LYSÁK, Marek SVITOK, Lenka MARTONFIOVA a Karol MARHOLD. So Closely Related and Yet So Different: Strong Contrasts Between the Evolutionary Histories of Species of the Cardamine pratensis Polyploid Complex in Central Europe. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2020, roč. 11, December 2020, s. 1-25. ISSN 1664-462X. doi:10.3389/fpls.2020.588856.
  11. 2019

  12. BROCK, J.R., Terezie MANDÁKOVÁ, Martin LYSÁK a I.A. AL-SHEHBAZ. Camelina neglecta (Brassicaceae, Camelineae), a new diploid species from Europe. PHYTOKEYS. SOFIA: PENSOFT PUBL, 2019, JAN, č. 115, s. 51-57. ISSN 1314-2011. doi:10.3897/phytokeys.115.31704.
  13. FINKE, A., Terezie MANDÁKOVÁ, K. NAWAZ, G.T.H. VU, P. NOVÁK, Jiří MACAS, Martin LYSÁK a A. PECINKA. Genome invasion by a hypomethylated satellite repeat in Australian crucifer Ballantinia antipoda. Plant Journal. Oxford: Blackwell Publishing Ltd, 2019, roč. 99, č. 6, s. 1066-1079. ISSN 0960-7412. doi:10.1111/tpj.14380.
  14. MANDÁKOVÁ, Terezie a Martin LYSÁK. Healthy Roots and Leaves: Comparative Genome Structure of Horseradish and Watercress. Plant Physiology. ROCKVILLE: American Society of Plant Physiologists, 2019, roč. 179, č. 1, s. 66-73. ISSN 0032-0889. doi:10.1104/pp.18.01165.
  15. MANDÁKOVÁ, Terezie, Milan POUCH, J.R. BROCK, I.A. AL-SHEHBAZ a Martin LYSÁK. Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2019, roč. 31, č. 11, s. 2596-2612. ISSN 1040-4651. doi:10.1105/tpc.19.00366.
  16. MANDÁKOVÁ, Terezie, Xinyi GUO a Martin LYSÁK. Phylo-cytogenomic Analysis of Genome Duplications in Crucifers. In 1st Annual CEITEC Postdoc Retreat. 2019.
  17. HLOUŠKOVÁ, Petra, Terezie MANDÁKOVÁ, Milan POUCH, Pavel TRÁVNÍČEK a Martin LYSÁK. The large genome size variation in the Hesperis clade was shaped by the prevalent proliferation of DNA repeats and rarer genome downsizing. Annals of Botany. Oxford: Oxford University Press, 2019, roč. 124, č. 1, s. 103-119. ISSN 0305-7364. doi:10.1093/aob/mcz036.
  18. MANDÁKOVÁ, Terezie, J. ZOZOMOVA-LIHOVA, H. KUDOH, Y.P. ZHAO, Martin LYSÁK a K. MARHOLD. The story of promiscuous crucifers: origin and genome evolution of an invasive species, Cardamine occulta (Brassicaceae), and its relatives. Annals of Botany. Oxford: Oxford University Press, 2019, roč. 124, č. 2, s. 209-220. ISSN 0305-7364. doi:10.1093/aob/mcz019.
  19. 2018

  20. LYSÁK, Martin. Brassicales: an update on chromosomal evolution and ancient polyploidy. Plant Systematics and Evolution. WIEN: Springer, 2018, roč. 304, č. 6, s. 757-762. ISSN 0378-2697. doi:10.1007/s00606-018-1507-2.
  21. MANDÁKOVÁ, Terezie, Xinyi GUO, B. OZUDOGRU, K. MUMMENHOFF a Martin LYSÁK. Hybridization-facilitated genome merger and repeated chromosome fusion after 8 million years. Plant Journal. Oxford: Blackwell Publishing Ltd, 2018, roč. 96, č. 4, s. 748-760. ISSN 0960-7412. doi:10.1111/tpj.14065.
  22. SHAN, Wenbo, Terezie MANDÁKOVÁ a Martin LYSÁK. Interphase chromosome organization and early meiotic chromosome pairing in Brassicaceae species. In 22nd International Chromosome Conference. 2018.
  23. DOGAN, Mert, Milan POUCH, Petra HLOUŠKOVÁ, Terezie MANDÁKOVÁ a Martin LYSÁK. Phylogenetics and repeatome analysis of the southern African tribe Heliophileae. In 22nd International Chromosome Conference, 2018. 2018.
  24. BAYAT, Soheila, Shokouh ESMAILBEGI KERMANI, Terezie MANDÁKOVÁ a Martin LYSÁK. Phylogeny and genome evolution in the tribe Thlaspideae (Brassicaceae). In 22nd International Chromosome Conference, 2018. 2018.
  25. ESMAILBEGI KERMANI, Shokouh, I.A. AL-SHEHBAZ, Milan POUCH, Terezie MANDÁKOVÁ, K. MUMMENHOFF, M.R. RAHIMINEJAD, M. MIRTADZADINI a Martin LYSÁK. Phylogeny and systematics of the tribe Thlaspideae (Brassicaceae) and the recognition of two new genera. Taxon. Bratislava: International Assoc. for Plant Taxonomy, 2018, roč. 67, č. 2, s. 324-340. ISSN 0040-0262. doi:10.12705/672.4.
  26. MANDÁKOVÁ, Terezie a Martin LYSÁK. Post-polyploid diploidization and diversification through dysploid changes. CURRENT OPINION IN PLANT BIOLOGY. LONDON: CURRENT BIOLOGY LTD, 2018, roč. 42, APR, s. 55-65. ISSN 1369-5266. doi:10.1016/j.pbi.2018.03.001.
  27. FILIAULT, D.L., ES BALLERINI, Terezie MANDÁKOVÁ, G. AKOZ, N.J. DERIEG, J. SCHMUTZ, J. JENKINS, J. GRIMWOOD, S.Q. SHU, R.D. HAYES, U. HELLSTEN, K. BARRY, J.Y. YAN, S. MIHALTCHEVA, M. KARAFIATOVA, V. NIZHYNSKA, E.M. KRAMER, Martin LYSÁK, S.A. HODGES a M. NORDBORG. The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history. elife. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD, 2018, roč. 7, OCT, s. 36426-36456. ISSN 2050-084X. doi:10.7554/eLife.36426.
  28. 2017

  29. ESMAILBEGI KERMANI, Shokouh, Martin LYSÁK, Mohammad Reza RAHIMINEJAD, Mansour MIRTADZADINI, Klaus MUMMENHOFF a Ihsan A. AL-SHEHBAZ. A taxonomic Revision of the genus Graellsia (Brassicaceae, tribe Thlaspideae). PHYTOTAXA. AUCKLAND: MAGNOLIA PRESS, 2017, roč. 313, č. 1, s. 105-116. ISSN 1179-3155. doi:10.11646/phytotaxa.313.1.7.
  30. ESMAILBEGI KERMANI, Shokouh, Martin LYSÁK, Mohammad Reza RAHIMINEJAD, Mansour MIRTADZADINI, Klaus MUMMENHOFF a Ihsan A. AL-SHEHBAZ. A taxonomic revision of the genus Pseudocamelina (Brasssicaceae, tribe Thlaspideae). PHYTOTAXA. AUCKLAND: MAGNOLIA PRESS, 2017, roč. 313, č. 1, s. 117-129. ISSN 1179-3155. doi:10.11646/phytotaxa.313.1.8.
  31. MANDÁKOVÁ, Terezie, Zheng LI, Michael S. BARKER a Martin LYSÁK. Diverse genome organization following 13 independent mesopolyploid events in Brassicaceae contrasts with convergent patterns of gene retention. Plant Journal. Hoboken (USA): Wiley-Blackwell, 2017, roč. 91, č. 1, s. 3-21. ISSN 0960-7412. doi:10.1111/tpj.13553.
  32. RABANAL, Fernando A., Terezie MANDÁKOVÁ, Luz M. SOTO-JIMENEZ, Robert GREENHALGH, David L. PARROTT, Stefan LUTZMAYER, Joshua G. STEFFEN, Viktoria NIZHYNSKA, Richard MOTT, Martin LYSÁK, Richar M. CLARK a Magnus NORDBORG. Epistatic and allelic interactions control expression of ribosomal RNA gene clusters in Arabidopsis thaliana. GENOME BIOLOGY. LONDON: BIOMED CENTRAL LTD, 2017, roč. 18, May, s. nestránkováno, 15 s. ISSN 1474-760X. doi:10.1186/s13059-017-1209-z.
  33. MANDÁKOVÁ, Terezie, Hjortur THORBJORNSSON, Rahul PISUPATI, Ilka REICHARDT, Martin LYSÁK a Kesara ANAMTHAWAT-JONSSON. Icelandic accession of Arabidopsis thaliana confirmed with cytogenetic markers and its origin inferred from whole-genome sequencing. ICELANDIC AGRICULTURAL SCIENCES. REYKJAVIK: RANNSOKNASTOFNUN LANDBUNADARINS, 2017, roč. 30, č. 2017, s. 29-38. ISSN 1670-567X. doi:10.16886/IAS.2017.03.
  34. MANDÁKOVÁ, Terezie, Petra HLOUŠKOVÁ, Dmitry A. GERMAN a Martin LYSÁK. Monophyletic Origin and Evolution of the Largest Crucifer Genomes. Plant Physiology. Rockville (USA): American Society of Plant Physiologists, 2017, roč. 174, č. 4, s. 2062-2071. ISSN 0032-0889. doi:10.1104/pp.17.00457.
  35. MANDÁKOVÁ, Terezie, Milan POUCH, Klára HARMANOVÁ, Itay MAYROSE, Shing Hei ZHAN a Martin LYSÁK. Multispeed genome diploidization and diversification after an ancient allopolyploidization. Molecular Ecology. Blackwell Science, 2017, roč. 26, č. 22, s. 6445-6462. ISSN 0962-1083. doi:10.1111/mec.14379.
  36. RABANAL, Fernando A., Viktoria NIZHYNSKA, Terezie MANDÁKOVÁ, Polina Yu NOVIKOVA, Martin LYSÁK, Richard MOTT a Magnus NORDBORG. Unstable Inheritance of 45S rRNA Genes in Arabidopsis thaliana. G3-Genes, Genomes, Genetics. USA: Bethesda, 2017, roč. 7, č. 4, s. 1201-1209. ISSN 2160-1836. doi:10.1534/g3.117.040204.
  37. LEE, Cheng-Ruei, Baosheng WANG, Julius P. MOJICA, Terezie MANDÁKOVÁ, Kasavajhala V. S. K. PRASAD, Jose Luis GOICOECHEA, Nadeesha PERERA, Uffe HELLSTEN, Hope N. HUNDLEY, Jenifer JOHNSON, Jane GRIMWOOD, Kerrie BARRY, Stephen FAIRCLOUGH, Jerry W. JENKINS, Yeisoo YU, Dave KUDRNA, Jianwei ZHANG, Jayson TALAG, Wolfgang GOLSER, Kathryn GHATTAS, M. Eric SCHRANZ, Rod WING, Martin LYSÁK, Jeremy SCHMUTZ, Daniel S. ROKHSAR a Thomas MITCHELL-OLDS. Young inversion with multiple linked QTLs under selection in a hybrid zone. Nature Ecology and Evolution. Nature Publishing Group, 2017, roč. 1, č. 5, s. nestránkováno, 12 s. ISSN 2397-334X. doi:10.1038/s41559-017-0119.
  38. 2016

  39. LYSÁK, Martin, Terezie MANDÁKOVÁ a M. Eric SCHRANZ. Comparative paleogenomics of crucifers: ancestral genomic blocks revisited. CURRENT OPINION IN PLANT BIOLOGY. LONDON: CURRENT BIOLOGY LTD, 2016, roč. 30, April, s. 108-115. ISSN 1369-5266. doi:10.1016/j.pbi.2016.02.001.
  40. MANDÁKOVÁ, Terezie, Andrew D. GLOSS, Noah K. WHITEMAN a Martin LYSÁK. How diploidization turned a tetraploid into a pseudotriploid. American Journal of Botany. St Louis: Botanical Soc Amer Inc, 2016, roč. 103, č. 7, s. 1187-1196. ISSN 0002-9122. doi:10.3732/ajb.1500452.
  41. JANEČKA, Jan a Martin LYSÁK. chromDraw: an R package for visualization of linear and circular karyotypes. Chromosome Research. Dordrecht: Springer, 2016, roč. 24, č. 2, s. 217-223. ISSN 0967-3849. doi:10.1007/s10577-015-9513-5.
  42. MANDÁKOVÁ, Terezie a Martin LYSÁK. Chromosome Preparation for Cytogenetic Analyses in Arabidopsis. Current protocols in plant biology. John Wiley & Sons, 2016, roč. 1, č. 1, s. 43-51. ISSN 2379-8068. doi:10.1002/cppb.20009.
  43. MANDÁKOVÁ, Terezie a Martin LYSÁK. Painting of Arabidopsis Chromosomes with Chromosome-Specific BAC Clones. Current protocols in plant biology. John Wiley & Sons, 2016, roč. 4, č. 2, s. 359-371. ISSN 2379-8068. doi:10.1002/cppb.20022.
  44. GEISER, Celine, Terezie MANDÁKOVÁ, Nils ARRIGO, Martin LYSÁK a Christian PARISOD. Repeated Whole-Genome Duplication, Karyotype Reshuffling, and Biased Retention of Stress-Responding Genes in Buckler Mustard. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2016, roč. 28, č. 1, s. 17-27. ISSN 1040-4651. doi:10.1105/tpc.15.00791.
  45. 2015

  46. HOHMANN, Nora, Eva M. WOLF, Martin LYSÁK a Marcus A. KOCH. A time-calibrated road map of brassicaceae species radiation and evolutionary history. The Plant Cell. Rockville (USA): American Society of Plant Biologists, 2015, roč. 27, č. 10, s. 2770-2784. ISSN 1040-4651. doi:10.1105/tpc.15.00482.
  47. KELLY, Laura J., Simon RENNY-BYFIELD, Jaume PELLICER, Jiří MACAS, Petr NOVÁK, Pavel NEUMANN, Martin LYSÁK, Peter D. DAY, Madeleine BERGER, Michael F. FAY, Richard A. NICHOLS, Andrew R. LEITCH a Ilia J. LEITCH. Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size. New Phytologist. HOBOKEN: WILEY-BLACKWELL, 2015, roč. 208, č. 2, s. 596-607. ISSN 0028-646X. doi:10.1111/nph.13471.
  48. TAN, Ek Han, Isabelle M. HENRY, Maruthachalam RAVI, Keith R. BRADNAM, Terezie MANDÁKOVÁ, Mohan P. A. MURIMUTHU, Ian KORF, Martin LYSÁK, Luca COMAI a Simon W. L. CHAN. Catastrophic chromosomal restructuring during genome elimination in plants. eLife. Oxford: eLife Sciences Publications, 2015, roč. 4, may, s. "nestránkováno", 16 s. ISSN 2050-084X. doi:10.7554/eLife.06516.
  49. WILLING, Eva-Maria, Vimal RAWAT, Terezie MANDÁKOVÁ, Florian MAUMUS, Geo Velikkakam JAMES, Karl J. V. NORDSTROM, Claude BECKER, Norman WARTHMANN, Claudia CHICA, Bogna SZARZYNSKA, Matthias ZYTNICKI, Maria C. ALBANI, Christiane KIEFER, Sara BERGONZI, Loren CASTAINGS, Julieta L. MATEOS, Markus C. BERNS, Nora BUJDOSO, Thomas PIOFCZYK, Laura DE LORENZO, Cristina BARRERO-SICILIA, Isabel MATEOS, Mathieu PIEDNOEL, Joerg HAGMANN, Romy CHEN-MIN-TAO, Raquel IGLESIAS-FERNANDEZ, Stephan C. SCHUSTER, Carlos ALONSO-BLANCO, Francois ROUDIER, Pilar CARBONERO, Javier PAZ-ARES, Seth J. DAVIS, Aleš PEČINKA, Hadi QUESNEVILLE, Vincent COLOT, Martin LYSÁK, Detlef WEIGEL, George COUPLAND a Korbinian SCHNEEBERGER. Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation. NATURE PLANTS. LONDON: NATURE PUBLISHING GROUP, 2015, roč. 1, č. 2, s. 1-7. ISSN 2055-026X. doi:10.1038/NPLANTS.2014.23.
  50. MANDÁKOVÁ, Terezie, Vasantika SINGH, Ute KRAMER a Martin LYSÁK. Genome Structure of the Heavy Metal Hyperaccumulator Noccaea caerulescens and Its Stability on Metalliferous and Nonmetalliferous Soils. Plant Physiology. Rockville (USA): American Society of Plant Physiologists, 2015, roč. 169, č. 1, s. "674"-"+", 22 s. ISSN 0032-0889. doi:10.1104/pp.15.00619.
  51. JANEČKA, Jan a Martin LYSÁK. chromDraw: a bioinformatic tool for visualization of linear and circular karyotypes. In The Biomania - Student Scientific Meeting 2015. 2015. ISBN 978-80-210-7933-5.
  52. JANEČKA, Jan a Martin LYSÁK. chromDraw: an R package for visualization of linear and circular karyotypes. In CEITEC PhD Retreat. 2015. ISBN 978-80-210-7825-3.
  53. JANEČKA, Jan a Martin LYSÁK. chromDraw for visualization of linear and circular karyotypes. In European Bioconductor Developers' Meeting 2015. 2015.
  54. MANDÁKOVÁ, Terezie, M. Eric SCHRANZ, Timothy F. SHARBEL, Hans DE JONG a Martin LYSÁK. Karyotype evolution in apomictic Boechera and the origin of the aberrant chromosomes. Plant Journal. Hoboken (USA): Wiley-Blackwell, 2015, roč. 82, č. 5, s. 785-793. ISSN 0960-7412. doi:10.1111/tpj.12849.
  55. CHENG, F., Martin LYSÁK, Terezie MANDÁKOVÁ a X. WANG. The Common Ancestral Genome of the Brassica Species. In Wang X. ; Kole CH. The Brassica rapa Genome. Německo: Springer Berlin Heidelberg, 2015. s. 97-105. Compendium of Plant Genomes. ISBN 978-3-662-47900-1. doi:10.1007/978-3-662-47901-8_8.
  56. 2014

  57. LEXA, Matej, Lenka RADOVÁ, Martin LYSÁK, Tomáš MARTÍNEK, Nikola TOM, Karol PÁL, Alexandru POPA a Jana KAPUSTOVÁ. Bioinformatics Summer School 2014: Theoretical and practical aspects of processing and analysis of sequencing data. 2014. doi:10.13140/RG.2.1.4517.0721.
  58. KIEFER, Markus, Roswitha SCHMICKL, Dmitry A. GERMAN, Terezie MANDÁKOVÁ, Martin LYSÁK, Ihsan A. AL-SHEHBAZ, Andreas FRANZKE, Klaus MUMMENHOFF, Alexandros STAMATAKIS a Marcus A. KOCH. BrassiBase: Introduction to a Novel Knowledge Database on Brassicaceae Evolution. PLANT AND CELL PHYSIOLOGY. Oxford: Oxford University Press, 2014, roč. 55, č. 1, s. "nestránkováno", 9 s. ISSN 0032-0781. doi:10.1093/pcp/pct158.
  59. HAY, Angela S., Bjorn PIEPER, Elizabeth COOKE, Terezie MANDÁKOVÁ, Maria CARTOLANO, Alexander D. TATTERSALL, Raffaele D. IOIO, Simon J. MCGOWAN, Michalis BARKOULAS, Carla GALINHA, Madlen I. RAST, Hugo HOFHUIS, Christiane THEN, Jörg PLIESKE, Martin GANAL, Richard MOTT, Jaime F. MARTINEZ- GARCIA, Mark A. CARINE, Robert W. SCOTLAND, Xiangchao GAN, Dmitry A. FILATOV, Martin LYSÁK a Miltos TSIANTIS. Cardamine hirsuta: a versatile genetic system for comparative studies. The Plant Journal. Hoboken (USA): Blackwell Science, 2014, roč. 78, č. 1, s. 1-15. ISSN 0960-7412. doi:10.1111/tpj.12447.
  60. LYSÁK, Martin a Paul F. FRANSZ. From transposon to chromosome and polyploidy. An update on cytogenetics and genomics of Arabidopsis. Chromosome Research. Dordrecht: Springer, 2014, roč. 22, č. 2, s. 99-101. ISSN 0967-3849. doi:10.1007/s10577-014-9427-7.
  61. MAJEROVÁ, Eva, Terezie MANDÁKOVÁ, GTH VU, Jiří FAJKUS, Martin LYSÁK a Miloslava FOJTOVÁ. Chromatin features of plant telomeric sequences at terminal vs. internal positions. Frontiers in Plant Science. LAUSANNE: Frontiers Research Foundation, 2014, roč. 5, November, s. "nestránkováno", 10 s. ISSN 1664-462X. doi:10.3389/fpls.2014.00593.
  62. LYSÁK, Martin. Live and let die: centromere loss during evolution of plant chromosomes. New Phytologist. Hoboken: WILEY-BLACKWELL, 2014, roč. 203, č. 4, s. 1082-1089. ISSN 0028-646X. doi:10.1111/nph.12885.
  63. ZOZOMOVÁ-LIHOVÁ, Judita, Karol KRAK, Terezie MANDÁKOVÁ, Kentaro K. SHIMIZU, Stanislav ŠPANIEL, Petr VÍT a Martin LYSÁK. Multiple hybridization events in Cardamine (Brassicaceae) during the last 150 years: revisiting a textbook example of neoallopolyploidy. Annals of Botany. Oxford: Oxford University Press, 2014, roč. 113, č. 5, s. 817-830. ISSN 0305-7364. doi:10.1093/aob/mcu012.
  64. MANDÁKOVÁ, Terezie, Karol MARHOLD a Martin LYSÁK. The widespread crucifer species Cardamine flexuosa is an allotetraploid with a conserved subgenomic structure. New Phytologist. Hoboken: WILEY-BLACKWELL, 2014, roč. 201, č. 3, s. 982-992. ISSN 0028-646X. doi:10.1111/nph.12567.
  65. ZOZOMOVÁ-LIHOVÁ, Judita, Terezie MANDÁKOVÁ, Alena KOVAŘÍKOVÁ, Andreas MÜHLHAUSEN, Klaus MUMMENHOFF, Martin LYSÁK a Aleš KOVAŘÍK. When fathers are instant losers: homogenization of rDNA loci in recently formed Cardamine X schulzii trigenomic allopolyploid. New Phytologist. Hoboken: WILEY-BLACKWELL, 2014, roč. 203, č. 4, s. 1096-1108. ISSN 0028-646X. doi:10.1111/nph.12873.
  66. 2013

  67. HAUNDRY, Annabelle, Adrian E. PLATTS, Emilio VELLO, Douglas R. HOEN, Mickael LECLERCQ, Robert J. WILLIAMSON, Ewa FORCZEK, Zoé JOLY-LOPEZ, Joshua G. STEFFEN, Khaled M. HAZZOURI, Ken DEWAR, John R. STINCHCOMBE, Daniel J. SCHOEN, Xiaowu WANG, Jeremy SCHMUTZ, Christopher D. TOWN, Patrick P. EDGER, J. Chris PIRES, Karen S. SCHUMAKER, David E. JARVIS, Terezie MANDÁKOVÁ, Martin LYSÁK, Erik VAN DEN BERGH, M. Eric SCHRANZ, Paul M. HARRISON, Alan M. MOSES, Thomas E. BUREAU, Stephen I. WRIGHT a Mathieu BLANCHETTE. An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nature Genetics. New York: Nature Publishing Group, 2013, roč. 45, č. 8, s. 891-"U228", 10 s. ISSN 1061-4036. doi:10.1038/ng.2684.
  68. LYSÁK, Martin a Terezie MANDÁKOVÁ. Analysis of Plant Meiotic Chromosomes by Chromosome Painting. In Pawlowski Wojciech P.; Grelon Mathidle; Armstrong Susan. Plant Meiosis: Methods and Protocols. New York: Humana Press, 2013. s. 13-24. Part 1. ISBN 978-1-62703-332-9. doi:10.1007/978-1-62703-333-6_2.
  69. CHENG, Feng, Terezie MANDÁKOVÁ, Jian WU, Qi XIE, Martin LYSÁK a Xiaowu WANG. Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa. Plant Cell. AMER SOC PLANT BIOLOGISTS, 2013, roč. 25, č. 5, s. 1541-1554. ISSN 1040-4651. doi:10.1105/tpc.113.110486.
  70. LONG, Quan, Fernando A. RABANAL, Dazhe MENG, Christian D. HUBER, Ashley FARLOW, Alexander PLATZER, Qingrun ZHANG, Bjarni J. VILHJÁLMSSON, Arthur KORTE, Viktoria NIZHYNSKA, Viktor VORONIN, Pamela KORTE, Laura SEDMAN, Terezie MANDÁKOVÁ, Martin LYSÁK, Uemit SEREN, Ines HELLMANN a Magnus NORDBORG. Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden. Nature Genetics. New York: Nature Publishing Group, 2013, roč. 45, č. 8, s. 884-"U218", 8 s. ISSN 1061-4036. doi:10.1038/ng.2678.
  71. SLOTTE, Tanja, Khaled M. HAZZOURI, J. Arvid AGREN, Daniel KOENIG, Florian MAUMUS, Ya-Long GUO, Kim STEIGE, Adrian E. PLATTS, Juan S. ESCOBAR, L. Killian NEWMAN, Wei WANG, Terezie MANDÁKOVÁ, Emilio VELLO, Lisa M. SMITH, Stefan R. HENZ, Joshua STEFFEN, Shohei TAKUNO, Yaniv BRANDVAIN, Graham COOP, Peter ANDOLFATTO, Tina T. HU, Mathieu BLANCHETTE, Richard M. CLARK, Hadi QUESNEVILLE, Magnus NORDBORG, Brandon S. GAUT, Martin LYSÁK, Jerry JENKINS, Jane GRIMWOOD, Jarrod CHAPMAN, Simon PROCHNIK, Shengqiang SHU, Daniel ROKHSAR, Jeremy SCHMUTZ, Detlef WEIGEL a Stephen I. WRIGHT. The Capsella rubella genome and the genomic consequences of rapid mating system evolution. Nature Genetics. New York: Nature Publishing Group, 2013, roč. 45, č. 7, s. 831-"U165", 7 s. ISSN 1061-4036. doi:10.1038/ng.2669.
  72. MANDÁKOVÁ, Terezie, Aleš KOVAŘÍK, Judita ZOZOMOVÁ-LIHOVÁ, Rie SHIMIZU-INATSUGI, Kentaro K. SHIMIZU, Klaus MUMMENHOFF, Karol MARHOLD a Martin LYSÁK. The More the Merrier: Recent Hybridization and Polyploidy in Cardamine. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2013, roč. 25, č. 9, s. 3280-3295. ISSN 1040-4651. doi:10.1105/tpc.113.114405.
  73. 2012

  74. HEENAN, Peter B, Dagmar F GOEKE, Gary J HOULISTON a Martin LYSÁK. Phylogenetic analyses of ITS and rbcL DNA sequences for sixteen genera of Australian and New Zealand Brassicaceae result in the expansion of the tribe Microlepidieae. Taxon. Bratislava: International Assoc. for Plant Taxonomy, 2012, roč. 61, č. 5, s. 970-979. ISSN 0040-0262.
  75. MANDÁKOVÁ, Terezie, Klaus MUMMENHOFF, Ihsan A AL-SHEHBAZ, Ladislav MUCINA, Andreas MUEHLHAUSEE a Martin LYSÁK. Whole-genome triplication and species radiation in the southern African tribe Heliophileae (Brassicaceae). Taxon. Bratislava: International Assoc. for Plant Taxonomy, 2012, roč. 61, č. 5, s. 989-1000. ISSN 0040-0262.
  76. 2011

  77. FRANZKE, Andreas, Martin LYSÁK, Ihsan A. AL-SHEHBAZ, Marcus A. KOCH a Klaus MUMMENHOFF. Cabbage family affairs: the evolutionary history of Brassicaceae. TRENDS in Plant Science. London: ELSEVIER SCIENCE LONDON, 2011, roč. 16, č. 2, s. 108-116. ISSN 1360-1385. doi:10.1016/j.tplants.2010.11.005.
  78. ZIOLKOWSKI, Piotr A., Martin LYSÁK a Waheeb K. HENEEN. Cytogenetic studies in vegetable Brassicas. In Genetics, Genomics and Breeding of Vegetable Brassicas. Enfield: Science Publishers, 2011. s. 257-303, 46 s. Genetics, Genomics and Breeding of Crop Plants. ISBN 978-1-57808-706-8.
  79. AMBROŽOVÁ, Kateřina, Terezie MANDÁKOVÁ, Petr BUREŠ, Pavel NEUMANN, Ilia J. LEITCH, Andrea KOBLÍŽKOVÁ, Jiří MACAS a Martin LYSÁK. Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies. Annals of Botany. Oxford: Oxford University Press, 2011, roč. 107, č. 2, s. 255-268. ISSN 0305-7364. doi:10.1093/aob/mcq235.
  80. SCHUBERT, Ingo a Martin LYSÁK. Interpretation of karyotype evolution should consider chromosome structural constraints. Trends in Genetics. Elsevier Trends Journals, 2011, roč. 27, č. 6, s. 207-216. ISSN 0168-9525. doi:10.1016/j.tig.2011.03.004.
  81. GERMAN, Dmitry A., Jason R. GRANT, Martin LYSÁK a Ihsan A. AL-SHEHBAZ. Molecular phylogeny and systematics of the tribe Chorisporeae (Brassicaceae). Plant Systematics and Evolution. Wien: Springer-Verlag, 2011, roč. 294, 1-2, s. 65-86. ISSN 0378-2697. doi:10.1007/s00606-011-0452-0.
  82. LYSÁK, Martin a Marcus A. KOCH. Phylogeny, Genome, and Karyotype Evolution of Crucifers (Brassicaceae). In Genetics and Genomics of the Brassicaceae. New York: Springer Science+Business Media, 2011. s. 1-31. Plant Genetics and Genomics: Crops and Models, 9. ISBN 978-1-4419-7117-3. doi:10.1007/978-1-4419-7118-0_1.
  83. 2010

  84. LYSÁK, Martin. Between Arabidopsis and cabbage: a decade of crucifer cytogenomics. In 10th Gatersleben Research Conference (GRCX) 2010. 2010.
  85. MANDÁKOVÁ, Terezie, Simon JOLY, Martin KRZYWINSKI, Klaus MUMMENHOFF a Martin LYSÁK. Fast diploidization in close mesopolyploid relatives of Arabidopsis. Plant Cell. UNITED STATES: AMER SOC PLANT BIOLOGISTS, 2010, roč. 22, č. 7, 14 s. ISSN 1040-4651.
  86. LYSÁK, Martin a Terezie MANDÁKOVÁ. Genome duplication and reshuffling: an insight from crucifers. In Structural and Functional Diversity of the Eukaryotic Genome. 2010. ISBN 978-80-210-5285-7.
  87. MANDÁKOVÁ, Terezie, Peter HEENAN a Martin LYSÁK. Island species radiation and karyotypic stasis in Pachycladon allopolyploids. BMC Evolutionary Biology. BioMed Central Ltd: London, 2010, roč. 2010, č. 10, s. 367-380. ISSN 1471-2148.
  88. LYSÁK, Martin. Past and present patterns of plant genome evolution: an insight from crucifers. In 19th International Sympsium "Biodiversity and Evolutionary Biology" of the German Botanical Society (DBG). 2010.
  89. LYSÁK, Martin, Terezie MANDÁKOVÁ a Eric LACOMBE. Reciprocal and multi-species chromosome BAC painting in crucifers (Brassicaceae). Cytogenetic and Genome Research. Switzerland: Karger, 2010, roč. 129, 1-3, 6 s. ISSN 1424-8581.
  90. 2009

  91. DIERSCHKE, Tom, Terezie MANDÁKOVÁ, Martin LYSÁK a Klaus MUMMENHOFF. A bicontinental origin of polyploid Australian/New Zealand Lepidium species (Brassicaceae)? Evidence from genomic in situ hybridization. Annals of Botany. Oxford: Oxford University Press, 2009, roč. 104, č. 4, s. 681-688. ISSN 0305-7364.
  92. LYSÁK, Martin. Comparative Cytogenetics of Wild Crucifers. In Biology and Breeding of Crucifers. USA: CRC Press, Taylor & Francis Group, 2009. s. 177-205. ISBN 978-1-4200-8608-9.
  93. AMBROŽOVÁ, Kateřina, Jiří MACAS, Pavel NEUMANN, Ilia J. LEITCH a Martin LYSÁK. Molecular and cytogenetic analysis of the biggest plant genomes. In Bulletin České společnosti experimentální biologie rostlin a Fyziologické sekce Slovenské botanické společnosti. 2009. ISSN 1213-6670.
  94. LYSÁK, Martin, Terezie MANDÁKOVÁ a Eric SCHRANZ. Polyploidy events and karyotype alterations in the genome evolution of crucifers (Brassicaceae). In 17th International Chromosome Conference. 2009. ISSN 0967-3849.
  95. MANDÁKOVÁ, Terezie a Martin LYSÁK. Studium evoluce karyotypu v čeledi brukvovitých (Brassicaceae) metodou komparativního chromosomálního paintingu. In Bulletin České společnosti experimentální biologie rostlin a Fyziologické sekce Slovenské botanické společnosti. 2009. ISSN 1213-6670.
  96. LYSÁK, Martin, Marcus A. KOCH, Jeremy M. BEAULIEU, Armin MEISTER a Ilia J. LIETCH. The dynamic ups and downs of genome size evolution in Brassicaceae. MOLECULAR BIOLOGY AND EVOLUTION. USA: OXFORD UNIV PRESS, 2009, roč. 26, č. 1, s. 85-98. ISSN 0737-4038.
  97. DE JONG, Hans, Christiane KIEFER, Eric SCHRANZ, Terezie MANDÁKOVÁ, Martin LYSÁK a Marcus KOCH. The Nature Of Aberrant Chromosomes In Apomictic Boechera Accessions. In Plant & Animal Genomes XVII Conference. 2009.
  98. MANDÁKOVÁ, Terezie a Martin LYSÁK. Unraveling the mesopolyploid history of Australian crucifers (Brassicaceae). In Polyploidy, Hybridization and Biodiversity. 2009.
  99. 2008

  100. MANDÁKOVÁ, Terezie a Martin LYSÁK. Chromosomal phylogeny and karyotype evolution in x=7 crucifer species (Brassicaceae). Plant Cell. United States: AMER SOC PLANT BIOLOGISTS, 2008, roč. 20, October, s. 2559-2570. ISSN 1040-4651.
  101. MANDÁKOVÁ, Terezie a Martin LYSÁK. Karyotype Evolution in n=7 Species from Different Crucifer Tribes. In Brassica2008. 2008.
  102. AMBROŽOVÁ, Kateřina, Jiří MACAS, Ilia J. LEITCH a Martin LYSÁK. Molecular analysis of repetitive elements in giant genomes of Fritillaria ( liliaceae). In The Comparative Biology of the Monocotyledons; Systematics and Evolution. 2008. ISBN 978-87-87772-03-7.
  103. 2007

  104. LYSÁK, Martin, Kwok CHEUNG, Michaela KITSCHKE a Petr BUREŠ. Ancestral Chromosomal Blocks Are Triplicated in Brassiceae Species with Varying Chromosome Number and Genome Size. Plant Physiology. USA: American Society of Plant Physiologists, 2007, roč. 145, č. 2, s. 402-410. ISSN 0032-0889.
  105. BUREŠ, Petr, Petr ŠMARDA, Ivana HRALOVÁ, Sara FUENTES-SORIANO, Martin LYSÁK, Radomír ŘEPKA, Klára HELÁNOVÁ, Olga ROTREKLOVÁ, Jana PROCHÁZKOVÁ, Luboš ÚRADNÍČEK a Jana KŮROVÁ. Correlation between GC content ond genome size in plants. Cytometry. New York: International Society for Analytical Cyt, 2007, roč. 71A, č. 9, s. 764-764. ISSN 0196-4763.
  106. LYSÁK, Martin. Evolutionary and comparative cytogenetics of the Brassicaceae and Cleomaceae. In Plant Biology &Botany. 2007.
  107. BUREŠ, Petr, Petr ŠMARDA, Ivana HRALOVÁ, Sara FUNES-SORIANO, Martin LYSÁK, Radomír ŘEPKA, Klára HELÁNOVÁ, Olga ROTREKLOVÁ, Jana PROCHÁZKOVÁ, Luboš ÚRADNÍČEK a Jana KŮROVÁ. GC Content in Plant Genomes. In Analytical Cytometry IV. Brno: Czech Society for Analytical Cytometry, 2007. s. 19-20. ISBN 978-80-239-9591-6.
  108. MANDÁKOVÁ, Terezie a Martin LYSÁK. Karyotype evolution in n=7 species from different tribes of the mustard family (Brassicaceae). In Chromosome Research. 2007. ISSN 0967-3849.
  109. LYSÁK, Martin. New insights into comparative phylogenomics of crucifers (Brassicaceae). In Résumés des Communications Orales. 2007.
  110. LYSÁK, Martin. Paleopolyploidy And Karyotype Evolution In Crucifers (Brassicaceae). In Plant &Animal Genome XV. 2007.
  111. FAY, Michael F., Ilia J. LEITCH, Jeremy M. BEAULIEU a Martin LYSÁK. Punctuated genome size evolution in Liliaceae. In Plant Biology & Botany. 2007.
  112. LEITCH, I.J., J.M. BEAULIEU, K. CHEUNG, L. HANSON, Martin LYSÁK a M.F. FAY. Punctuated genome size evolution in Liliaceae. J EVOLUTION BIOL. Oxon: BLACKWELL PUBLISHING, 2007, roč. 20, č. 6, s. 2296-2308. ISSN 1010-061X.
  113. KOCH, Marcus A., Christoph DOBEŠ, Christiane KIEFER, Roswitha SCHMICKL, Leoš KLIMEŠ a Martin LYSÁK. Supernetwork identifies multiple events of plastid trnF(GAA) pseudogene evolution in the Brassicaceae. Mol. Biol. Evol. USA: Oxford Univ Press, 2007, roč. 24, č. 1, s. 63-73. ISSN 0737-4038.
  114. MANDÁKOVÁ, Terezie a Martin LYSÁK. Unexpected paleopolyploid evolution in Stenopetalum - a genus with the lowest chromosome numbers in the Brassicaceae. In Bulletin České společnosti experimentální biologie rostlin a Fyziologické sekce Slovenské botanické společnosti. Olomouc: Česká společnost experimentální biologie rostlin, 2007. s. 63-64. ISSN 1213-6670.
  115. LYSÁK, Martin a Terezie MANDÁKOVÁ. Unexpected paleopolyploid evolution in Stenopetalum - a genus with the lowest chromosome numbers in the Brassicaceae. In Chromosome Research. Netherlands: Springer, 2007. s. 11-12. ISSN 0967-3849.
  116. 2006

  117. LYSÁK, Martin. Diving deeper into the crucifer genomes. In 15 Crucifer Genetics Workshop: Brassica 2006. 2006.
  118. BERR, Alexander, Ales PECINKA, Armin MEISTER, Gregor KRETH, Jorg FUCHS, Frank R. BLATTNER, Martin LYSÁK a Ingo SCHUBERT. Chromosome arrangement and nuclear architecture but not centromeric sequences are conserved between Arabidopsis thaliana and Arabidopsis lyrata. The Plant Journal. England: BLACKWELL PUBLISHING, 2006, Neuveden, č. 48, s. 771-783. ISSN 0960-7412.
  119. SCHRANZ, Eric M., Martin LYSÁK a Thomas MITCHELL-OLDS. The ABC’s of comparative genomics in the Brassicaceae: building blocks of crucifer genomes. TRENDS in Plant Science. England: ELSEVIER SCIENCE LONDON, 2006, roč. 11, č. 11, s. 535-542. ISSN 1360-1385.
  120. LYSÁK, Martin, A. BERR, A. PECINKA, R. SCHMIDT, K. MCBREEN a I. SCHUBERT. Title: Mechanisms of chromosome number reduction in Arabidopsis thaliana and related Brassicaceae species. Proceedings of the National Academy of Sciences of the USA. Washington, 2006, roč. 103, č. 13, s. 5224-5229, 5 s. ISSN 0027-8424.
  121. LYSÁK, Martin a Christian LEXER. Towards the era of comparative evolutionary genomics in Brassicaceae. Plant Systematics and Evolution. Wien: Springer-Verlag, 2006, roč. 259, 2-4, s. 175-198. ISSN 0378-2697.
  122. 2001

  123. SIROKY, Jiri, Martin LYSÁK, Jaroslav DOLEŽEL, Eduard KEJNOVSKÝ a Boris VYSKOT. Heterogeneity of rDNA distribution and genome size in Silene spp. Chromosome Research. Springer, 2001, roč. 9, s. 387-393. ISSN 0967-3849.
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